Xiphophorus couchianus (Monterrey platyfish): 114150300
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Entry
114150300 CDS
T05908
Name
(RefSeq) retinoic acid receptor RXR-gamma-B-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03320
PPAR signaling pathway
xco04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
114150300
03320 PPAR signaling pathway
114150300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114150300
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114150300
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
114150300
Nuclear receptors [BR:
xco03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
114150300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
114150300
NCBI-ProteinID:
XP_027882442
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All DBs
Position
9:complement(14981245..15008203)
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AA seq
482 aa
AA seq
DB search
MDSNDPYLHLSMWHPASLPATGGSPRRERGCGHYSAGPMSAGHGHPPSMAGMVGHPSVIS
TSRPLPSPMSTLGSPMNGLASPYPVITSSLGSPSVPLQSTPNMNFGPISSPQMNSMNNVS
SSEDIKPPPGLQSLGNINYQCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTV
RKDLTYTCRDNKECLIDKRQRNRCQYCRYQKCLAMGMKREGVGVCAAVQEERQRGKERGE
NEVESTSSFNDDMPVEKILDAELAVEPKTETYSDGSPGNSTNDPVTNICQAADKQLFTLV
EWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSA
GVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDAKGLSNPSEVEALREKVYASL
ESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQ
IT
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggacagcaatgatccatatttacacctcagcatgtggcaccctgcctctttacctgca
accggaggcagccctaggagggaaaggggttgcggtcactactcggcagggccaatgagt
gcaggccacggtcatcccccttccatggctggcatggtgggacatccctcagtcatcagc
acctccaggcccctaccgtcccccatgtccaccctgggctcgccgatgaacggcctggca
tcaccttatcccgtcatcacgtcgtcactgggatcaccctccgtacccctccagtctact
cccaacatgaactttggaccaatcagcagtccacagatgaactcaatgaacaatgttagc
agttcggaggacatcaagcctccaccgggcctgcagtctctgggaaacatcaactaccaa
tgtacgagcccgggggggatgtcaaagcacatctgtgctatctgcggggatcgctcttca
ggaaagcactatggtgtgtacagctgcgaaggctgcaaaggctttttcaagcgcacggtc
cgtaaagatctcacctacacgtgtcgagacaacaaagagtgcctgatagacaagcgccag
cggaaccgctgccagtactgccgctatcagaagtgcctggccatgggcatgaagagagaa
ggtgtgggcgtgtgtgcagccgtgcaggaagagaggcagcgcgggaaggagcgcggcgag
aacgaggtggaatccaccagcagtttcaacgacgacatgccggtggaaaagatcctggat
gctgagctggctgtggagcccaaaacggagacgtacagcgatggcagccccggaaactcg
accaacgaccccgtcactaatatctgtcaagcagcagacaagcagctcttcaccttggtg
gaatgggccaaaaggatcccacacttctctgagctccctctggacgaccaggtcatcctg
cttcgagcaggttggaatgagctgctcattgcctctttctcgcatcgctcagtcacagtt
aaagacggcatcctgttggctacaggtctacacgtgcacagaagtagcgcccacagtgca
ggagtgggatccatcttcgacagagtcctcacagagttggtatccaaaatgaaagacatg
cagatggataagacagagctgggctgcctgcgagccatcgttctattcaacccagatgca
aaaggtttgtcaaacccatcagaggtggaggcgctaagagaaaaagtctacgcttcattg
gagtcgtatacaaaacagaagtaccccgaccagcctggcaggttcgccaaactgctcctg
cgcctgccagctctgcgctccatcggtctcaagtgtttggagcatctgttcttctttaaa
ctaatcggggacacgcccattgacactttcctgatggagatgctggaggctccgcatcag
atcacatga
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