Xiphophorus couchianus (Monterrey platyfish): 114150302
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Entry
114150302 CDS
T05908
Name
(RefSeq) tubulin alpha-1C chain-like
KO
K07374
tubulin alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04145
Phagosome
xco04210
Apoptosis
xco04517
IgSF CAM signaling
xco04530
Tight junction
xco04540
Gap junction
xco04814
Motor proteins
xco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114150302
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114150302
09143 Cell growth and death
04210 Apoptosis
114150302
09144 Cellular community - eukaryotes
04530 Tight junction
114150302
04540 Gap junction
114150302
09142 Cell motility
04814 Motor proteins
114150302
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
114150302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114150302
03036 Chromosome and associated proteins [BR:
xco03036
]
114150302
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114150302
04147 Exosome [BR:
xco04147
]
114150302
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114150302
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
114150302
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
114150302
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
114150302
Exosomal proteins of other body fluids (saliva and urine)
114150302
Exosomal proteins of colorectal cancer cells
114150302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
DUF8666
Motif
Other DBs
NCBI-GeneID:
114150302
NCBI-ProteinID:
XP_027882445
LinkDB
All DBs
Position
9:complement(14960756..14963827)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHIGQAGVQIGDSCWELYCLEHGIQPDGQMPSDKTVGGGDDSFNTFFSETGTGK
HVPRAVFVDLEPSVIDEVRTGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEIIDQVLE
RIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSVLTTHTTLEHSDCAFMVDNEAIYDICQRNLGIDRPAYSNLNRIISQIVSSVTA
SLRFDGALNVDLTEFQTNLVPYPRIHFPMATYAPVISAEKAYHEQLTVAEITNSCFEPAN
QMVKCDPRMGKYMACCLLYRGDVMPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKLQRAVCMLSNTTAIAEAWARLNHKFDLMYTKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGADSMGEEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgcatctctgtacacatagggcaggctggtgtccagattggtgattcttgc
tgggagctctactgtttggaacatgggatacagccggatggacagatgcccagtgacaaa
accgttggaggaggagatgactctttcaatacgttcttcagtgagactggaactgggaag
catgtccccagagctgtttttgtagacctcgagccctctgtcattgatgaagtacgtact
ggaacgtaccgccagctgtttcatcctgaacagatgatcactggtaaggaagatgcagcc
aacaactatgcccgtggacactacaccattggaaaagagatcatcgaccaggttctggaa
aggatccgcagactgtctgaccagtgcaccggccttcagggcttcctgattttccatagc
tttggtggaggaaccggctctggttttacctccctgctaatggagcgtctttctgtggac
tacggcaagaagtccaaacttgagttttcaatctacccagctcctcaggtgtccactgct
gtggtggagccttacaactctgtcttgaccacacacaccaccctggagcactccgactgt
gcgttcatggtggacaatgaggcaatctacgacatctgccagagaaaccttggcattgac
cgtccagcctacagcaacctgaacaggatcatcagccagatcgtgtcctctgttactgct
tctcttcgtttcgatggtgccctgaatgtggatctgacagagttccagaccaacttggtg
ccatatccccgcatccacttccctatggccacatacgcccctgtgatctcagccgagaag
gcgtatcacgagcagcttacagtggctgagattactaactcctgctttgagcctgccaat
cagatggttaaatgtgacccccgcatgggcaagtacatggcttgctgccttctgtaccgt
ggcgacgtgatgcccaaagatgtcaatgctgccattgctgcaatcaaaacaaaacggtct
atccagtttgtagactggtgtccaactggtttcaaggtaggcatcaattaccagccaccc
actgtggttccggggggagacctagccaagctccagagggcagtgtgcatgctgagcaac
accacagctattgcggaagcctgggctcgacttaaccacaagtttgacctgatgtacacc
aagcgggcctttgttcactggtatgtaggggaagggatggaagagggtgaattctctgag
gccagggaggatttggcagctctggagaaggactatgaggaggttggagctgatagcatg
ggagaggaagatgaaggagaagaatattga
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