KEGG   Xiphophorus couchianus (Monterrey platyfish): 114150374
Entry
114150374         CDS       T05908                                 
Symbol
kdm4a
Name
(RefSeq) lysine-specific demethylase 4A isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:xco03036]
    114150374 (kdm4a)
Enzymes [BR:xco01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     114150374 (kdm4a)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     114150374 (kdm4a)
Chromosome and associated proteins [BR:xco03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    114150374 (kdm4a)
SSDB
Motif
Pfam: JmjC Tudor_2 zf-HC5HC2H_2 PHD_2 zf-HC5HC2H JmjN PHD Tudor_5 PHD_5 DUF4537
Other DBs
NCBI-GeneID: 114150374
NCBI-ProteinID: XP_027882544
LinkDB
Position
9:complement(841342..867647)
AA seq 1031 aa
MTTDTPDQTPNFRVMTFTPSKEEFKDFVRYVAFMESQGAHIAGIAKIIPPKGWKPRHTYD
DIDDLLIPAPIQQVVTGQSGLFTQYNIQKKPMTVVEFQKTSNLAKFCSPRYVDFDELERK
FWKNLTFNPPLYGADVSGTLFDPDVSEWNMAHLNTILDTVESESAVKIKGLTTPCLYFGM
WKSAFPWHTEDMNLYSICYLHYGEPKSWYVVPPEHGRRLERLAKGFFPGNAQSCEAFLRH
KMTLISPSILKKYGIPYEKVTQEAGQFIVTFPFAYHAGFNHGFNCAESTNFATQRWIDYG
KQAKLCSCRQDMVKISMDAFVRKFQPDRYKLWKAGKDDTPIDHVKPTPEAAEFLKKEKAS
PCKKVSSEASSEEPTSPAQKDKSSDLQSGKKRPLEPVQTSEGDNCDVRVKEAVEPESPKL
SMKSSPNKVPAPSAQPKSERQLEKHIKPPPKCISKANKKTSNRLISARKDKSGGRAADMS
PLLPVEGNAEGSVEPRVETSNIPVHKLFQRTLSPADVLHVHSYAKGDYGEEILVQEEEQA
IRSDKKEDIKHQVAEVLPPDAELESNPDQLPRPPHIKDNSSEKDVLEELPPVEAGTFEGD
NWAKPLTHLWQSSPPNLKKEREYNQRMGSKPPYCSICMLFQTYQQAECARSVDSHVAGAG
GRMQTKPLIPEMCFTITTEEDAESEEQPVAHYLEEDGTSLLISCSQCSVWVHASCYGVNP
ASVSTEWKCARCKANAMNESCCLCLLRGGALHKTTNDKWVHVLCAVAVMEARFVNIAERS
PVDLSGIPLQRFKLKCYYCKKRVKKASGCCVQCSHGRCPTAYHPTCAQAAGVLMQPDDWP
FVVHVTCCRHKGPAQIERNKAAMHELTVGQKVICKHKNGRYYQCDVVQLSKETFYEVNFD
DGSFSDNLFPEDIVNQDCAQLGPPPQGEVVQVRWTDGLVYGAKFVAAHVIQMYLVEFEDG
SQLTAKRDDVYTLDEELPKRVKSRLSKASDMRFDGIFEDNEIIQESKRQRVINSRYRGDY
IEPVIYRAIME
NT seq 3096 nt   +upstreamnt  +downstreamnt
atgactacggacactccagaccaaactcctaatttcagggtaatgacattcaccccctcc
aaagaagagttcaaggactttgttcggtatgttgccttcatggagtcacaaggagctcac
atagctggaattgccaaaatcattccacctaaaggctggaaaccaagacatacatatgat
gacatcgatgatctgctgattcctgctccaatacagcaggtggtcactggccagtcagga
ttgttcacgcagtacaacatccagaagaaaccaatgactgtcgttgagtttcagaagacc
tccaatttggccaagttttgcagtcccagatatgtggattttgatgagctggaaaggaag
ttttggaagaacctgacctttaaccccccactgtatggagctgatgtcagtggaacactg
tttgatccagatgtgtctgaatggaacatggctcatcttaacacaatcctggacactgtg
gagagtgagagtgcagtgaagataaaaggacttaccaccccttgcctttattttgggatg
tggaagagtgcttttccttggcacacagaggacatgaatctttacagcatttgctacctg
cactacggcgagcccaagtcatggtatgttgtcccaccagagcatggcagaagactggag
cggcttgctaaaggtttctttcctgggaatgctcagagctgtgaagccttcttgcggcac
aagatgactttaatttcaccctcaatcctcaaaaaatatggtataccatatgagaaggtc
actcaggaagctgggcagttcattgtgacttttccatttgcttatcatgctggtttcaac
cacggtttcaattgtgctgagtccaccaactttgctacacagcgatggattgattatgga
aaacaagctaaattgtgttcttgccgtcaagatatggtgaagatatctatggatgcattt
gtacgcaagtttcagcctgaccgttacaaactgtggaaagcagggaaagatgacactccc
attgaccacgtgaaaccaactccagaggctgctgagtttctcaaaaaagaaaaggccagc
ccctgtaaaaaggtttccagtgaagcatcgtctgaggagccaacatctcctgcacagaag
gacaaaagctcagatcttcaaagtgggaaaaaacgtccgcttgaacctgtccagacctct
gaaggagacaattgcgatgtaagagtcaaggaggcggtggagcctgagagtcccaagcta
tcaatgaagagttctcccaacaaagtcccagctccctcagcacaacccaagtcagaacgt
cagttggagaagcacataaaaccaccacctaaatgcatttctaaagccaacaagaaaact
tcaaacagactaatttctgcaagaaaggacaagagcggtggacgggctgcagacatgagt
cctctgctgccagtagaaggaaatgcagagggcagtgtggagcctcgggtggaaaccagt
aacatccctgtgcacaagctgtttcagagaacactcagccctgctgacgtcctgcatgtt
catagctatgccaaaggagactatggagaagaaatcctggtgcaggaggaagaacaggcc
atacgcagtgataagaaagaagacatcaaacatcaagtggcagaagtgttgcctcctgat
gctgagctggaaagtaatccagatcagctgccacggcccccacatatcaaagataacagc
agtgaaaaagacgtcttagaggagcttcccccagtggaggcaggtacttttgaaggggac
aactgggccaaacctctgacccatttgtggcagagtagccctcccaatctgaagaaagaa
agggagtacaaccagcgcatgggctctaagcctccatactgctccatctgtatgctcttc
caaacatatcaacaggcagagtgtgccagaagcgtggacagtcatgtcgctggtgcaggt
gggaggatgcagaccaagcctcttatcccagaaatgtgtttcaccatcaccacagaagaa
gacgcagagagtgaagaacaacccgttgcacattatttagaggaagatggaaccagcctc
ctcatcagctgctcacagtgcagtgtttgggttcacgccagctgctacggtgtgaaccca
gccagtgtgagcaccgagtggaaatgtgcacgatgtaaggccaatgctatgaatgagagt
tgctgtctgtgtttgctaagaggtggagccctacataaaaccaccaatgataagtgggta
catgtgttgtgtgctgtggcagtaatggaggcgcgctttgtcaacattgctgaaagaagt
cctgtggatctgagtggaatccctctacagagatttaaactgaaatgttactactgcaag
aaacgcgtgaaaaaggcatctggctgctgtgtgcaatgctctcatggccgctgtcccact
gcataccaccctacctgcgcccaggctgctggggtactgatgcagccagatgattggccc
tttgtggtccatgtgacctgctgtcggcacaaaggtcctgctcagattgagcgcaataag
gcagcaatgcatgagcttactgtgggtcagaaagtcatctgtaagcacaagaatggccgt
tactatcagtgtgatgtagttcagctctcaaaagagaccttttatgaagtcaactttgat
gacggctccttcagtgataacctgttcccggaggacattgtgaatcaagactgcgctcaa
cttggcccccctccgcagggtgaagtggttcaggtgcgctggacagatggactggtctac
ggggccaagtttgtggcagctcatgttattcaaatgtacttggtggaatttgaagatggc
tcacagctaacagccaagagagatgatgtctacactctggacgaagaacttcccaagaga
gtcaaatccagactgtctaaggcatcagatatgaggtttgatggaatttttgaagacaat
gagattatccaagaatccaagagacaaagagtgatcaactcccggtacagaggcgactac
attgagcctgtgatttacagagccatcatggagtag

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