Xiphophorus couchianus (Monterrey platyfish): 114150382
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Entry
114150382 CDS
T05908
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114150382 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114150382 (rad54l)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
114150382 (rad54l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
Motif
Other DBs
NCBI-GeneID:
114150382
NCBI-ProteinID:
XP_027882558
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Position
9:complement(813924..835192)
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AA seq
739 aa
AA seq
DB search
MRRSLAPSELAKRKPAGEACGDGGNTGNTEKRRKVDGMRESHISPYRKPLTQLNNWPGCM
EADRHESFIRSILSKPFKIPIPNYTGSLGSKALGLKHAGVRKSLHDPFAEDALVLYEPPT
LSAHDLIKADKEKLPVHVVVDPVLGKVLRPHQREGVKFLWDCVTGRRIPGSYGCIMADEM
GLGKTLQCITLMWTLLRQSLNAKPEINKAIVVSPSSLVRNWYNEVGKWLGGRISPVAIDG
GSKEDIDKQLVNFISQHGLKVATPILIISYETFRLHADVLHRGKVGLVICDEGHRLKNAD
NQTYQALHSMNAQRRVLISGTPIQNDLLEYFSLVHFVNAGILGTAQEFKKRFELPILKGR
DADASNRDREEGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCKLTPLQTELYM
RFLKQAKPTETLREGRINVSSLSSITSLKKLCNHPALIYDKCVEEEEGFEGALHLFPPGY
SAKVLEPQLSGKMVTLDYILAVTRSTTGDKVVLVSNYTQTLDLFEKLCRFRRYLYVRLDG
TMSIKKRAKIVEKFNSPQNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMA
RVWRDGQKKTCYIYRLISTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGQLRELF
TLNEETASDTHDKFHCCRCVNGREVRLPPEGADCTSDLSQWNHCFDKKGLRDQVLKASWN
SAVSFVFHQRSHEDQKGVV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagcctggctcccagtgagctggctaaacgcaaaccagccggtgaggcctgc
ggagacggggggaacacaggaaacaccgagaagagaaggaaagtggatgggatgagggag
agtcacatttctccctacaggaagcctctgacacaacttaacaactggcctggatgcatg
gaagctgacagacatgagtcatttatccgaagcattctctccaagccttttaaaattccc
attcccaattacacaggttcactaggaagcaaagcacttggcctaaagcatgcaggagta
aggaaatcgctccatgatccatttgcagaagatgctttggttctttatgagccgccgact
ctgagtgctcatgatctgatcaaagctgacaaggaaaagcttccagttcatgttgttgtg
gatccagtattgggaaaagttctcagaccgcatcagagagagggagtgaagttcctttgg
gactgtgtgactggcagacgcatccctggatcctacggctgcatcatggctgatgagatg
gggctgggaaagactttgcagtgtatcactctcatgtggaccttgctacgccagagcctt
aatgccaagccagagataaacaaggccattgtggtttcaccttctagtctggttcgaaac
tggtataatgaagtaggaaagtggcttggaggtcgcatttcaccagtggcaatcgatggg
ggctcaaaggaggatattgataagcagctcgtgaacttcatctctcagcatggtttgaaa
gtagcaacacccatcctgatcatttcttatgagacatttcgacttcatgctgatgtcctg
cacaggggcaaagttggactcgtgatctgtgacgaggggcatcgactgaagaatgctgac
aaccagacttaccaagctctgcattctatgaatgcccagcggagagttctgatatcaggc
actccaatccagaacgacctgctggagtatttcagtctggtccattttgtgaatgctgga
atccttggtactgcccaggagtttaagaagcgatttgagcttcccattctgaagggtaga
gatgcagacgccagtaacagagacagagaggaaggagaagaaaaactcaaggaactcatc
agcattgtcaacaggtgtttgattaggagaacatcggatatcctgtcaaagtatcttcct
gtgaaaattgagcaagttgtgtgctgcaaactaactccgttgcagacagaactgtacatg
cgctttttgaagcaggccaaacccacagagacattgcgagaaggcagaatcaatgtctcc
tcactgtcttctatcacatctctcaagaagctgtgtaatcacccagctctcatttatgat
aagtgtgttgaagaagaggagggcttcgagggcgcgctccatctgtttcctcctggttac
tccgctaaagtactcgaacctcagctgtctggtaaaatggtgactctcgactacattttg
gctgtgacgagatctacaactggtgacaaagtggtgctggtctccaactatactcaaaca
ctggacctctttgaaaagttgtgcagatttagaaggtacctctatgttagactggacggc
acaatgtctatcaagaaaagggctaagatcgtggaaaaattcaacagtccccaaaaccct
gaatttattttcatgctgagcagcaaggcgggtggatgtggcctcaatctgattggtgcc
aatcgcttggtaatgtttgatccagactggaacccagccaatgatgagcaggcaatggct
cgagtgtggagagatggccagaagaagacctgttacatctacagactgatctctactgga
accattgaggagaagatcctgcagagacaagcccataaaaaagccctgagcagctgtgtg
gtggatgaggagcaggatgtggagcgtcatttttctctaggccaacttagagaactcttc
acactcaatgaagaaactgccagtgatacacatgacaagtttcactgctgtcgctgtgta
aatggcagagaggttcgactgcctccagaaggtgccgactgtaccagtgacctttcccag
tggaaccactgctttgacaagaagggactgagggaccaagtgctgaaagcctcctggaac
agtgctgtctcctttgtctttcatcaacgctctcatgaggatcagaagggtgttgtatga
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