Xiphophorus couchianus (Monterrey platyfish): 114150431
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Entry
114150431 CDS
T05908
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114150431 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114150431 (rexo1)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
RNases
114150431 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
114150431
NCBI-ProteinID:
XP_027882622
LinkDB
All DBs
Position
9:complement(28262964..28281053)
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AA seq
1236 aa
AA seq
DB search
MLRSTGFFRGIDCPFYADYNDGKGSRNGCNRPYCHFRHSRQSRPSYGDVKKLQSGQKDQG
YDPFNPEVVRPQEQQNGQPAPSGDLSGALEMVNRAIEEVRGEVEREQRKLSRIGDEPYSP
TEKTGSSSSYVAKNQAAASHLAYDPGSYQITSGGYDPTPGCSKYTLDSDSQKYNSSSSME
YVPTSLKKPQSRTQVPCPPQSTKYLSTACSAQWKYTLDNSGPSTNMEYDPLSNYSAGIAV
KNKRDEGSHPVETDYKKAYRLDASDKEGGTAGKKPPQASIDLKKYTISDSDEESSGTEYR
PTSLSNLQQRKANIVSARDALGKDTKDRSKSIKGTLTQRNKEELAQDLDSQENTKQKENL
EKRKLADQSGHGKISKPEKTQNIDKEVKKSSSVKSSSGSSSSAKDKLSCKNFKQDSAKKE
NKNQKDDSKNMLKMKDKVQREGRDEKRCESKSKMVEKVKRALSEQEKDARESKKLKPSER
EKDQSKNKDSQHRNGKLDSSRREKDVKKSKSSSSSCKGSSAKAKQSASSSKEKLEDLSLS
HADLFGDESPEEADPMEVDSDDEPEEVLVRKSADALKRGLMSKRTASERTPSSSEDKAEG
EPERSRSNWEEPDDVRVDFSMFQDDLDFDSDPMEECLRIFNESNDVKKEDKGRQAKQASR
DSEEERSTDSTLTTLFPGQKKRVSHFVAKGDTDAPSKTVVRPYKRPTPQEVCFQRMQLAQ
QQAAQLSASVKAASQSSTSSFAGEKKRIAHRPNPQITSTKTTGPAHGKPAASETPQGVKS
QTTAGILSKTSSTMAQKRTAHTPTMKSSSMRRPVIPTEFGAKVPTNIRQRYLNTFIDECV
KFCPSEDVAFQTALDEEKLVYERSSSKNIYLNVAVNTLKKLRGKSSSCSSPVKKDSRLAA
KRKAQSHEEVLGGRLAATTSFTVNRSGKHQEEKLSGANLYRKLQAYLMTEEQLQEHGYPR
LNPEAPGKAVIYNQPERKICPDPFGRICCRCGAEYKVSVNGSCVRREECSYHWGRLRRHR
VAGGWETTYSCCSAAVGAPGCQISKQHVQDGRKESLDGFVSTFSKPLPPDGNGGVFALDC
EMCYTKQGLELTRVTVIDSEMKVIYDTFVKPDSKVVDYNTRFSGVTEEDLVNATITLRDV
QAVLLSMFRAESVLIGHSLESDLLALKLIHSSVVDTAIVFPHRLGLPYKRALKTLMADYL
KRIIQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggtccaccggcttcttccgagggattgactgtccgttttacgcggactacaac
gacggcaaaggcagtagaaatgggtgtaacagaccgtactgtcacttcagacacagccgg
cagagtcggccgtcctacggagacgttaaaaagctgcagtctggacaaaaagaccagggt
tacgatcccttcaacccagaagtagtgagacctcaggagcagcagaatgggcagcctgct
ccttctggggacctcagcggcgccttggagatggtcaacagagccatcgaggaagtccgt
ggcgaggtggagcgagaacagcggaagctgtcccgcatcggagacgaaccttacagtccc
actgagaagaccggctcgtcttcatcctacgtcgctaaaaaccaagcagcggcctcgcac
ctggcttacgaccctgggagctatcagatcacatcgggaggatacgatcccaccccgggc
tgcagcaagtacaccttggattcagacagtcagaagtacaacagcagcagctctatggaa
tatgttcccacttccctgaaaaagcctcagtctcggacacaagtgccctgtcctccccag
agcaccaagtatctgagcactgcatgctctgcacagtggaaatacactctggacaactct
gggccgtctacaaatatggagtatgaccctctgtccaactactctgcagggatcgcagtg
aaaaacaagagagacgagggttcacatccagttgagactgactataagaaggcatatcgg
ctggatgcttcagataaggagggtggtacagctgggaaaaagccaccgcaggcgagtata
gacttaaaaaagtacaccatctccgactctgatgaggagagctctggaacagagtaccga
cccacatcgcttagcaatctccagcaaagaaaggccaacattgtgtcggccagagacgct
ttggggaaagatacaaaagacaggagtaaaagtataaagggcactcttacacagaggaac
aaggaggagcttgcacaggacttagactcacaggaaaataccaaacaaaaggagaacttg
gagaaaaggaagctggcagatcaaagtggtcatggtaaaattagcaaaccagagaaaaca
caaaatattgataaagaagtaaagaaatcatctagtgttaaaagtagcagtggtagcagc
agtagtgcaaaagacaaattatcatgtaagaactttaagcaagactctgcaaagaaggag
aacaaaaatcagaaagatgatagtaaaaacatgctaaagatgaaggataaagttcaaaga
gaaggcagggatgaaaagagatgtgagagtaagagcaagatggtggagaaagttaagaga
gccttaagtgaacaagagaaagatgcacgagaaagcaaaaaactgaaaccatcggagcgt
gagaaagaccaaagcaagaataaagacagccagcacagaaacggtaaactggatagcagt
agaagagaaaaggacgttaagaaaagcaaaagcagctccagcagctgcaaggggagctca
gctaaagcgaagcaaagcgccagctcgtcaaaagagaaactcgaagacctgagtctgagc
cacgcagatctgttcggagacgagagccccgaggaggccgacccgatggaggtggacagc
gacgacgagccggaggaagtcctggtcaggaaatcagccgacgcgctaaagaggggacta
atgagcaagaggacggcttcagagaggacgccatcttcctctgaggacaaagccgagggg
gaaccggaacgcagcaggtcgaactgggaggagcctgacgacgtccgagtcgacttctcc
atgtttcaggacgatctggacttcgactcggatccgatggaggagtgtttgcggatcttc
aacgaatccaacgatgtgaagaaggaggacaagggacggcaagcaaagcaggcttccagg
gattcagaggaggagagaagcacagatagcactttaaccaccctcttccccggccaaaag
aagagagtgtcccattttgttgccaaaggagataccgatgcaccttcgaaaacagtggtc
cggccgtacaagcggcccactccgcaggaggtctgcttccagcgtatgcagctggcgcag
cagcaagccgcccagctttcagcgtcagtcaaagccgcctcacagagctcgacctccagc
ttcgccggagaaaagaagagaatcgctcaccggcccaatcctcagataacctccaccaag
acgacaggtccagcacatggaaaaccagctgccagtgagactccccagggggtgaagagc
caaaccacagctggcattctgtccaaaacctcgtctacgatggcgcagaagaggacggca
catacacccaccatgaagagctcctccatgaggcgtccggtcatccccactgagttcggg
gcgaaagttcccaccaacatccgccagcgttacctcaacacgttcatagacgaatgtgtc
aagttttgcccgtcggaggatgttgcatttcagacggcccttgatgaggagaagctggtg
tacgagcgcagtagcagtaaaaacatctacctcaacgttgccgtcaacacgctgaagaag
cttcggggcaaaagcagctcgtgttcatcacctgtcaaaaaggattccaggcttgcagct
aagcgaaaggcgcagtcccatgaggaggttctgggaggtcgtcttgcagccacaaccagc
ttcactgtcaaccggtcgggcaaacatcaggaggagaaactctccggcgccaacctgtac
aggaagctgcaagcgtacctgatgacagaggagcagctgcaggagcacggatacccgcgg
ctaaaccccgaggccccgggcaaggccgtcatctacaaccagccagagagaaagatctgc
ccagacccgttcggcaggatatgctgccgctgcggcgccgagtataaggtcagcgtcaac
ggcagctgcgtccgcagagaggagtgcagctatcactgggggcgtttacgcagacacaga
gtcgctggcggctgggagacgacgtacagctgctgctcggctgctgtcggagctcctgga
tgccagatatctaagcaacatgtgcaggacggccgtaaagagtccctggacggcttcgtg
tcgacgttcagcaaaccgctgccaccggacggaaacggcggagttttcgctttggattgt
gagatgtgctacactaagcagggcctggagctgaccagggtcacagtcatcgactccgag
atgaaggtcatctacgacacgtttgtgaagcccgacagcaaagtggtcgactacaacaca
cgattctcaggcgtcactgaggaggacttggtgaacgccaccatcaccctgagagacgtt
caggcggttctgctcagcatgttcagggcagagtccgtcctcatcggacacagtctggag
agcgacttgctcgcactcaagctcatccacagctcagtcgtagacacggccatcgttttt
cctcaccgcctcggtctgccctacaaacgtgccttgaagactctgatggccgattacctc
aaacgcatcatccaggacaatgtggagggccacgactccagcgaggacgcgtcggcctgc
atggagctgatgatatggaagattaaagaggacgcaaaggtcaagagatga
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