Xiphophorus couchianus (Monterrey platyfish): 114150504
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Entry
114150504 CDS
T05908
Symbol
cacna1e
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04010
MAPK signaling pathway
xco04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
114150504 (cacna1e)
04020 Calcium signaling pathway
114150504 (cacna1e)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114150504 (cacna1e)
Ion channels [BR:
xco04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
114150504 (cacna1e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
114150504
NCBI-ProteinID:
XP_027882724
LinkDB
All DBs
Position
9:12896232..12999031
Genome browser
AA seq
2520 aa
AA seq
DB search
MLELGSCSVSSQSLTDDHNALGRPPTSGGPDSPAPGFGQMCGSSSPRHHVLHPSPTDCES
WQKHRGGLAGGSSPCSEPHPLLEPQSLSTSYDTLYLPQMTGQAQTLHPNRLGLSLDVAST
FDAGGGMLGVDGDLAVSPNVIKRRRGGLIEQKDIVKAHQAHKIHSTPQARRKEWEMARFG
DDVPGLLSSGDGGSERNRNRDGAAVSTGGISPAFKQTKAQRARTMALYNPIPVRENCFTV
NRSLFIFGEDNVVRKYAKKITEWPPFEYMILTTIIANCIVLALEQHLPGEDKTPMSKRLE
KTEPYFIGMFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNISVD
LRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSG
KLHKTCTPQPGILENETVDSSEYIFPCGVRQCPAKYACSETWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENRNPGPSALDVLKRATTIKRRG
MDVHQGQSGEEHYGDISSVGMPMARASVRSAKRGPTAYFRRKERLLRISIRRVVKTHTFY
WTVLGLVALNTLCVAIVHHNQPFWLSNFLYYAEFLFLALFLTEMFLKMYSLGPRLYFHSS
FNCFDCSVIIGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNS
MKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWN
EVMYNGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEAE
AAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSRPTYSYSLEEAQGSMRE
GRPPPPLKPSNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSREILFSSPSEEKDGPPA
TVHGRPLSLHRKAVQHTPSGSLKRPTDPLASPGQTQPIASSVPLDATVPGDIPEPPMAVL
ESECLDPTSVPCLTLPEPPESESTGESKKPGLNHKHVSERRSPRLNAERQHRHVKKFRPP
DNVDTLTPEKGGHIEIRGRRGHHCDHRNGTRNQASSPGNEGTLDGSYDVGESRTSSGIVK
EKGPEPENEDGEVHKHEESRLANRNEGGNSNLKDVLSGDLCPLKQDNALNQSELLVPNKP
EDNSEEKESELDHNKLSSSVIIEVPDVQSSLELSTITVNNKDPETCKSEKEEAEETKPVN
TVTPDSMFIFKPDNPMRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATSSDWNKVL
RYFDYVFTGVFTFEMIIKMIHQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVMGNN
KGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVI
AVQLFKGKFFYCTDSSKDTEKDCQGYYIDYGKDKKEVKKRDWKRHEFHYDNVIWALLTLF
TVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITF
QEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLT
MIALNTIVLMMKYYSAPPAYDAFLKHLNTAFTVLFSIECVLKILAFGFLNYFRDTWNIFD
FITVLGSITEIVVDLQRIDTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHNNFKTFLGALMLLFRSATGESWQEIM
LSCLGGQQCETDPSLPPAALTTDQKEGCGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNF
EYLTRDSSILGPHHLDEFVRIWGEYDRAASGRIHYTDMYEMLTNMSPPLGLGKKCPSKVA
YKRLVLMNMPVDDDMTVHFTSTLMALIRTALEVKIARGGEDRNQMDLDLQKEIGVIWPHL
SQKSLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASS
LPQEILCNAKSLSFLRHSAGSALTRGGFVALSPISPQEMFLQPRPRSREEKVEEEDEDYH
SPYHLYPHPHHHHHHHHHLHTLVPEVVEYNHLMQQARQDQTVIKSPQRTASIRASSMPRL
AVDPQAAVSEDGRLMKRSFSTIGDQCVNGLWQEQHSLEKISPDGTFRTRQRSYRGPKISP
RETSSHERGRSKERRHLLSPDVSRCNSEERSREPSCETRHSRSPSEGRVHNVQKQVMATG
SPANSASESSTPRNRRQLPQTPSRPRPYISYSPLVCKPSTSPTAAPLSSEGQYQPQDAAG
GSTETSWRAEKESRPLSAGHCSSGGQISGPSHPSPHRYISEPYLPFHEDFSGDDSGDRQE
TLTFESAITTSLGRANAISSAPQLRHSWQVPNGHVRKHLVQGSPTDNSELLSDTDEDDRC
NT seq
7563 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcatgttctgtcagctctcagtctctgacagatgaccacaatgct
ttggggcgacctcccacctcaggagggcctgacagtccagcacctggttttggacagatg
tgtggcagcagtagccccaggcatcacgtcctccacccgtcaccaacggattgtgagagc
tggcagaagcatcggggagggctggctggaggttcaagcccctgctctgagcctcacccg
ctcctggaaccccagagtctgtccaccagctacgacaccctctacctcccacagatgact
gggcaggctcaaactctccacccgaaccgccttggcctttctctggatgtggcctcaaca
tttgacgctggaggtgggatgcttggggtggatggagatttggcagtcagtcccaacgta
atcaagagacggcggggaggcctgattgaacagaaagacattgtcaaagcacaccaggcc
cacaaaatacacagcacaccacaggctcgacgcaaagagtgggaaatggcccgctttgga
gacgacgtgccgggcttgttgagctctggggatggaggatcggagcgcaacaggaaccgc
gatggagcggccgtgtccacaggtgggatctccccggcgttcaagcagaccaaagcgcag
cgcgcccgcaccatggccctgtacaaccccatcccggttagggagaactgcttcaccgtc
aacaggtcgctcttcatcttcggagaggacaacgtggtcaggaagtatgctaagaaaatc
actgagtggcctcctttcgagtacatgatcctcactaccatcattgccaactgcattgtc
ttggctctggagcagcacctccctggtgaggacaaaacccccatgtccaagagactggag
aaaacagagccttacttcatagggatgttctgttttgaggctgggataaagatcatcgct
ctgggctttgtgtttcataaagggtcctacctcaggaacggctggaacgtcatggatttt
attgtagtcctcagcgggatcctggctgcagcaggggctcatatgaacatctcagtggat
ctgaggacgctgagggctgtgagagtactgcgacccctcaaactggtctcaggcatacca
agtctgcagattgtcctgaagtccataatgaaggccatggtacctcttctgcagatcggt
ctgttgctgttctttgccatcctcatgttcgcaatcatcggcctggagttttacagcgga
aaactgcacaagacttgcacaccacagccaggaatactggaaaatgagacagtggactct
tctgagtacatcttcccgtgtggcgtgcgtcaatgtccagccaagtacgcctgctcagag
acctggattgggcctaatgacggcatcacccagtttgacaacatcctgtttgcagtcctc
actgtcttccagtgcatcaccatggagggatggaccactgtgctctacaataccaatgat
gctttgggtcccacctggaactggctttacttcatccctctcatcatcatcggctccttc
ttcgtcctgaacctggtgctgggagtcctctctggagaatttgccaaagagagggagaga
gtggaaaatcgcagagcttttatgaagctgagacgccagcagcagattgaaagagagctg
aacggctaccgcgcttggattgaccgagctgaggaagtcatgcttgcagaggagaacaga
aatccaggaccttctgcacttgatgtgctgaagcgagcaaccaccataaagaggagaggg
atggatgtgcatcagggccagtcaggggaggaacattatggagatatctcttctgtgggc
atgcccatggccagagccagcgttcggagtgcaaagcgaggtccaacagcctattttcga
cgtaaagagcgtctcctgcggatttccattcgccgtgtggtgaagacacacactttctac
tggacagtgctcggccttgtggctctcaacacgctgtgtgtcgccattgtgcaccacaac
cagcccttctggctgtccaattttctttactatgcagagttcctgttcctcgctctgttc
ctgacagagatgttcctgaagatgtatagcttgggaccacgtctctactttcattcctca
tttaactgctttgactgcagtgtaatcattggcagtatctttgaggtgctgtggggattc
ttcagaccaggaacttcatttggtatcagtgtccttcgcgctctccgcctgcttaggatc
ttcaaaatcaccaagtattgggcgtctctgagaaacctggttgtgtctctgatgaactcc
atgaagtccatcatctccctgatcttccttctctttctcttcattgttgtcttcgcactc
cttggcatgcagctttttggtggcaggttcatctttgaagactacacaccaacaaacttt
gacacctttcctgcagccattatgactgtgtttcagatcctgactggagaggactggaat
gaggtcatgtataatggtattcgctcccaaggaggagtgaagtcggggatgtggtcctcc
atctattttatagttcttactctttttggaaactatactcttctgaatgtcttcttggcc
attgctgtggataacctcgccaatgcacaagaacttaccaaggatgaagaagaagcagag
gcagctttcaaccagaagcatgctctgcagaaagcaaaggaggtcggaccgctttcctcc
ttcatgtcttcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatt
caccgcagccggccgacctactcctactccctggaggaggcccagggcagtatgagggag
ggccgcccaccgccaccactcaaaccctctaactctttcatgtccaggagagagaggaga
aaaaggatgactatgtctgtttgggagcagaggaccagtcagctacggagacaccggcag
atgtccagccgagagatcttgttcagcagtcccagtgaggaaaaagatggcccccctgct
acagttcatggacgtcccctgtcgctgcaccggaaagctgtgcagcacacgccatcaggg
agcttgaagcgtccgactgaccctctagcctcaccaggtcagacccagcccatagcctcc
tctgtgcccctggatgccactgttcctggtgacattcctgagcctccgatggcagtcctg
gaatcagagtgtctggatcctacaagcgtgccatgcctgaccttaccagaacctcccgaa
tccgaatccaccggagaaagcaaaaagccaggccttaatcacaaacacgtttccgagcgc
cgaagcccgagactgaatgcagaacgtcaacacaggcatgtaaaaaagtttagacctcca
gataatgttgacactctgacccctgagaaaggaggtcacattgagatcaggggccgaagg
ggccatcattgtgaccatcggaacggcaccagaaatcaagcgtcctctcctggaaatgaa
ggaacgttagacggcagctatgatgttggagaaagcagaacaagttcgggaatagtcaag
gagaagggaccagagcctgagaacgaagatggagaggtgcacaagcacgaggagagcaga
ctggctaaccgtaacgagggaggaaactctaacttgaaagacgtcctctctggtgacctc
tgccctctgaagcaagacaacgctctgaaccagtctgagctgctggtacccaacaaacca
gaggataacagtgaagaaaaggagtcagagctggaccacaataagctcagctccagtgta
attatcgaggtgcctgacgtgcagtcgtctcttgaactctccaccatcacagtcaacaac
aaggaccctgaaacctgcaagtcagagaaggaagaggcagaagagacaaaacctgtcaac
actgtgaccccagacagcatgttcatctttaaacctgacaacccgatgcgtcgagcatgt
cattatgtggtgaacctcaggtactttgaaatgtgcatcctgctggtgatagctgctagc
agcatagcactggctgcagaagaccctgtagccacatcatcagactggaataaggttcta
cgttattttgattacgtgttcactggagtcttcacctttgaaatgatcataaagatgatt
caccagggtctgatcctccatgacggctcctacttcagagatctgtggaacatcttggac
ttcattgttgtggtgggagcactggtggcctttgccctcaccaacgtgatgggaaacaat
aaaggaagagacataaagaccatcaaatctctgagagtgttgcgcgtcctcagacctctg
aagaccatcaagcgacttcctaagctcaaggcggtgtttgactgtgtggtgacatctctg
aaaaacgtcttcaatattttgattgtctacaaacttttcatgttcatcttcgccgtcatc
gctgtgcagcttttcaaggggaagttcttctattgcaccgacagttcaaaggacacagag
aaagactgccagggttactacatcgactatgggaaggataaaaaagaggtgaaaaagaga
gactggaagaggcacgagtttcattacgacaacgtcatctgggctctgctcacactcttc
actgtttccaccggagaaggctggcctcaggttctgcagcactctgtagatgtgacagaa
gaagacaggggtccaagtcacggcaacagaatggaaatgtcaatcttctatgtcatctac
tttgttgtcttccccttcttcttcgtcaacatctttgtggctctcatcatcatcaccttc
caagagcagggggataagatgatggaggagtgcagccttgagaaaaatgaaagagcttgc
atagactttgccatcagtgcaaagcccctgactcgatacatgccacagaatcggcacacg
ttccagtaccgtctgtggcattttgtggtgtccccatcatttgaatatacagtcttgacc
atgattgctctcaacaccattgtcctgatgatgaagtattactctgccccgcctgcatat
gatgccttcctgaaacatctaaacacagcttttactgtcctcttctcaatcgagtgcgtt
ctgaagatcctggcttttggttttctgaactacttccgagacacgtggaacatttttgac
ttcatcaccgtcttgggcagcataaccgagattgtggttgacttgcagaggattgacacg
ttcaacatgagtttcttgaagctgtttcgagccgctcgtctgatcaaactgctgaggcag
ggttacaccatccgcatcctcctctggacttttgttcagtccttcaaggcattgccttac
gtctgtctgctcattgcaatgctcttcttcatctacgccatcattggcatgcaggtgttt
gggaacattaaactgaatgaagagactcacattaaccaacacaacaactttaaaaccttc
ttaggtgccctgatgctgctgttcaggagtgcaacgggggagtcgtggcaggagatcatg
ctgtcgtgtctgggggggcagcagtgtgaaacagacccctcacttccccctgcagccctg
acgacggaccagaaggagggctgcggctcagacttcgcctacttctactttgtctccttc
atctttttcagctcttttttgatgctgaacttatttgtggctgtgatcatggataacttt
gagtatcttacgagagactcgtctatcctgggtccacaccacctggatgagtttgtccga
atttggggggaatacgatcgagctgccagtggtcgtatccattacactgacatgtatgag
atgttgaccaacatgtcgccacctctaggcctgggcaagaaatgcccctccaaggtggct
tataagagacttgtcctgatgaacatgcctgtggacgatgacatgacagtccacttcaca
tccaccctcatggccctcattcgcactgcgcttgaggtcaaaatagcaagaggaggagaa
gatcgaaatcaaatggatttggatctgcagaaggaaattggagttatctggcctcacctc
tcccagaagtcactggacctgctggttccaattcacaaagccagtgacatgactatagga
aagatatatgctgccatgatgatcatggattattacaagcagagcaaagccaagaaactg
cgccagcaactggaggaacaaaaacacgcccccatgtttcagcgtatggatgcttcctct
cttcctcaagaaatcctatgcaatgccaagtccctgtcatttctccgacacagtgctgga
tctgctctcaccagaggagggtttgtggcgctcagccccatttctccacaagagatgttc
ctgcagccacggcctcgctccagagaagagaaggtggaggaagaggatgaagactatcat
tcaccataccacctgtacccccatccacatcaccaccaccaccatcatcatcatttgcat
acactggtgccggaggtagtggagtacaaccatctgatgcagcaggccaggcaggaccaa
acagttattaaatcaccgcagcgcactgcatctatcagagcatcctccatgcccaggctg
gctgttgatccacaggctgcagtgtcggaagacgggaggctgatgaaacgctccttctcc
accatcggagatcagtgtgtgaacggcctgtggcaggagcaacactctctggagaaaatc
agccctgacggcacattcagaactcgtcaaaggagttacagaggtcccaaaatcagcccc
agagaaacaagcagtcacgagagagggagatcaaaagaacggcgccacctgctgtctcct
gatgtgtcccgctgtaactcagaggagcgaagcagggagccttcctgcgagacgaggcac
tcccgctcaccgagtgaaggacgagtgcacaacgtccagaaacaggtaatggcaacagga
agcccagcaaactcagcctcagagtccagtacccctcgtaaccgccgccagctgcctcag
acgccttctcgtccgcggccttatatctcatactctcctcttgtctgcaaaccatcaacc
tctcccactgctgctcccctctcctctgaagggcaataccagcctcaggacgccgccggt
ggctccacagagacctcatggcgggctgagaaggagagcagacctctgtcggcgggtcac
tgttcatctggaggtcagatttcaggaccaagccacccatcgcctcaccgctacatatca
gagccctatctcccgttccatgaggacttcagcggtgatgattcaggtgacagacaggaa
acactgacctttgagtctgccataaccaccagtctgggacgggccaatgccataagctct
gcccctcagctcagacactcctggcaggttcccaatggtcatgtccggaagcacttagtc
caggggagcccgactgacaacagcgagctgctaagtgatacagatgaggacgaccgctgc
taa
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integrated database retrieval system
