Xiphophorus couchianus (Monterrey platyfish): 114150542
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Entry
114150542 CDS
T05908
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114150542 (hps3)
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
114150542 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
114150542
NCBI-ProteinID:
XP_027882795
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All DBs
Position
9:complement(32539241..32561491)
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AA seq
1060 aa
AA seq
DB search
MVHVYNCHPFTSQQIVQVEQEPGLVCCGGGALFVVTTGGCKVEVYNLETEGCPLICRFAS
MGTVRRIQHSSIGDYLVTIEEKNSATYLRVYTNWRHQAEEKSRVGVRLLGHLLRGASVWG
GVQMEIIEIPLSEHPVSLACCALTGDLLVGCENTLVLFALRRHTQQNLQNQQNLQNSWSN
SEQSCSQSPGRTSSQNQELSVLDFERSVILHLSKITPKQVALCGGYVAVQAELEVLVLKL
EATAEPTGVEEHSDSFKSEDYPEEQSDFLLVPKHQELLGDRARTCDVPVSVEQTGLEDRR
RYTLSYLLFRRFTPEFFQGCSVEEIQLHSLQLHPMSTSKQSASVDEPACMFCFFSLPTAG
YLYSLRGGVELLSTYQYPEKSLQAVLTDHLLHVITRNALQSFTVRCAALAARVEDPYIDT
TMKACPPCSLEVCALRMQLFIGLRSLCVFGRHVVLLSTADTEAPEETERHTQRRGLDLKE
HNMLTGIFLAVGIDPSTTPALENLLSRPFLSRRWAISSPKETSPVGHGWNLYVVDTVPPI
TLHQEMVEYSQRYAETNPQGLSLRHLLSEAHLLLRSSLLESSEQRQASEGVRKMAAQTYG
VELEESFRQNSAQLGDSFSRGSQKDCHLALPYYRMSGLSVTEVMSRNRPLPGSPHSYGPG
FLFYLKNYLLEETDQILGQEDADEVTRIFSQSEPSMLVGACASPCMMNVDPAATLQILQR
LEETAGVSVPLTITMATMMLRLGNMAQYTELMERHTEMLLVYGFIEEPRLLLHSAAGGGG
GKHPQVRPTALAGQLADSKPGLLVAAMVALHENNKVQLEPADHVFKELGCESSLQVDFWE
AMLMASSQDAVIQELVFRLASVYIDRLTAGESPTKHKSLKSADDLISCCSHYGALYPWLT
VLNPAQTSSYQHQEALHKLQSLLCGPSLSIGNVAPLLESLSEETLWGFSLHLLCATRRGH
YGSSIERLLDRCPQAIIAYANHQLQDKHMALWWQKLLPELCNRTRAAADNGVLLGALTET
LVVVAMETSPAEFLELLPDDGSASFFLPHLLTCGQKHLPA
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccatcctttcacttcacagcagattgtacaggtggaacag
gaacctggactcgtgtgctgtggaggcggagcgctgtttgttgtgacaacaggaggatgc
aaggtggaggtgtacaatttggaaacggagggctgccctctcatatgccgctttgctagc
atgggcacagtgaggaggatccagcacagctccatcggagactacttggtaaccatagag
gaaaaaaacagcgccacctatctgagagtttacacaaactggcggcatcaggcggaggag
aagtcccgtgttggggtgcgtttattgggccacctgcttcgcggcgcgtctgtctggggc
ggagtgcagatggagatcattgagatcccgctgtcggagcatcccgtgtccctggcatgc
tgcgccctgactggagacctcctggtgggctgcgagaacacgctggttcttttcgctttg
aggagacacacccagcagaacctgcagaaccagcagaacctccagaactcctggtccaac
tcagagcagagctgcagtcagagtccaggtcgaacttctagtcaaaatcaggaactttct
gtcttggactttgaacgttcggtcatcctgcatctctccaaaattactcctaagcaggtg
gcgctgtgtggaggttatgtggcagtccaggccgagcttgaagttctggttctgaaactg
gaagcaacggccgagcccacaggcgtggaagagcattcagattcctttaaaagtgaagat
tatccagaagagcagagcgacttcctgctggttccgaagcaccaggagctgctgggggac
cgagccagaacctgcgacgtccccgtcagcgtggagcagaccggactggaggaccggagg
cgctacacgctctcctaccttctcttcaggcgttttactccagagttctttcaaggctgc
agtgtggaggagattcagctccactcgctgcagctccaccccatgtccaccagtaagcag
tcggcgtctgtggacgaaccggcctgcatgttctgcttcttctctcttcccacggcggga
tacctctacagcctgaggggcggggttgagctcctctccacctatcagtatccagagaag
tcgctgcaggcggtgctcactgatcacctgttgcacgtcataaccaggaatgcgctgcag
tcgtttacggtgcgttgtgccgcactagcagccagggttgaagacccctacattgacacc
accatgaaggcttgtccaccatgcagcctggaggtgtgtgcgctcagaatgcagttattt
attggtctgcggtcgctgtgtgtcttcggccgccatgttgtcctcctctccactgctgac
acagaagcaccagaggaaacggaacgccacacacagcgccggggcctcgatttgaaagag
cacaacatgctgactggtattttccttgctgtgggaatcgatccatcaaccacaccagct
ctggagaacctcctgtcacgccccttcctgagcaggaggtgggccatctcatcccccaaa
gaaaccagtcctgttggacacgggtggaatctgtatgttgtcgacaccgtacctcccatc
actctccatcaggagatggttgagtacagccagcgctacgcagagactaacccacagggc
ctgagtcttcgtcacctcctcagtgaagcccacctcctcctccgctcctccctgctggag
tcgtcagagcagcggcaggccagcgaaggcgtcagaaagatggccgcccagacatacggg
gtggagctggaggaatcgttcagacagaactccgcccagcttggagacagtttcagcagg
ggcagtcagaaggattgtcacctggctttgccgtactacaggatgtctggtctgtcggtc
actgaggtcatgtccagaaaccgtccactcccaggcagtcctcactcctacggacctggt
ttcctattttatctcaagaattacctgttagaggaaaccgaccagatcctcggtcaggaa
gatgcagatgaggtcactagaattttcagccaatcagagccctcgatgctggtcggcgcg
tgcgccagcccgtgcatgatgaacgtcgacccggctgcaacgctgcagattttacaacgt
ctggaggaaacggctggcgtgtcggtgcctctgacaatcaccatggcgaccatgatgctg
cgcctgggcaacatggcgcagtacacggagctgatggagcgacacactgagatgctgctg
gtgtacgggttcatcgaggagccgaggttgctgctacactcagcagcaggaggaggagga
gggaaacaccctcaggtgcgtccgacggcgttggctggccagctggctgattccaagcct
ggactcctggtggcggccatggtggctttacacgagaacaacaaggtgcagctggagccg
gccgatcacgtctttaaggagctgggatgtgagagcagtctgcaggtggacttttgggag
gcgatgctcatggcgtcctcccaggatgccgtcattcaggagcttgtgttccgactcgct
tcggtttacatcgaccgactgacggccggcgaatccccaacaaaacacaagtcgctgaaa
agtgcggatgacctgatcagctgctgctctcattatggcgccctctacccctggctcact
gtcctgaacccagctcagacttccagctaccaacaccaggaggcgctgcacaaactgcag
tcgttgctctgcggtccgtccctctccatcggcaacgttgctcctctgttggagagtctg
tcggaggaaacgctgtggggcttcagcctgcacctcctctgtgccaccagaagggggcac
tatggcagcagcattgagcggttattggaccgctgtcctcaggccatcatagcctacgcc
aaccaccagctgcaggacaaacacatggctctctggtggcagaaactacttcctgagttg
tgcaaccggacgagagcggccgctgacaacggcgtcctgctcggagctctgacagagacg
ctggtggtggttgccatggagacgagccccgcagagtttctggagctcctgccagacgac
ggctcggcgtcgttcttcctgcctcacctgttgacctgcggccagaaacacctgccggcc
tga
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