Xiphophorus couchianus (Monterrey platyfish): 114150671
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Entry
114150671 CDS
T05908
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114150671 (chd1l)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
114150671 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
LIG3_BRCT
DEAD
AAA_34
Selenoprotein_S
BRCT_2
AAA_22
IBB
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
114150671
NCBI-ProteinID:
XP_027883060
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All DBs
Position
9:complement(22013314..22030644)
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AA seq
1018 aa
AA seq
DB search
MSDILGKIRNTITERKKTALSQRDLQTFGLRGIQLRAYQLDGVQWLTQSLNDQQGCILGD
EMGLGKTCQTISLLVYESGALGKKGPFLVLSPLSVMENWRKELESFAPSLTVLCYKGDKE
RRAEIQREKTAQDFRVLLTTYELCLKDASFLKRWRWEVLVVDEAHRLKNQNSLLHKTLTE
FSVGFRLLLTGTPVQNNLQELYSLLSFIQPSIFTPEEADNFVSSYSDVRSRPALASELQS
ILEPFLLRRVKSEVTFDLPKKTELVVYHGMSALQKKYYKAILMRDYEAFVNEQGSKNRLL
NILVNLRKCVDHPYLFDGVEPEPFQIGDHLIEASGKLCLLDSILAFLHTGGHRVLLFSQM
TRMLDILQDYMEYRGYSYERMDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTA
ADTVVFVDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLQLTNT
VIEEGRFSLLDQAQSAAAGLQLSEILKFGVDKLLSSEESSIQEVRLEKILGPSRDGQWVD
DDDDDGFSPLEEEVENESDSVEQNHMYFFEGKDYSKDPSSEDQRSFDRILEEQMAEFQKA
AGEGRALRRKAGSSLSVAFAIPARKRKPLTEAELELRRQKRQEAAAKRAKMMEDKKRQEE
EEKRRKKMAWWESCGYKSLCLQLVDSEEEEEDEEEEEDDISVCSTDSTSTDIRYVLGDVT
HPHTARGDAIIVHCVDDSGRWGRGGLFTALEVRSDEPRKRYELAGKMKDLELGNVLLFPI
DDKQSRLDGRDQLALIVAQKRDKANNLSGILLGALDEGLKKIYSAAKKNKASVHLPRIGH
STKGFNWYGTERLIRKHLASRGIPTFIYYHSRAVKKTVSHQTPAPSAAASNQAPLPSTEG
PTDETETEGPGPSALPRSFSPAELPSFMKGVRVFFYNIPASERKRLARYLITYDGDEEDV
MSEEVTHIVAEVENHIQIQELLDLVHKNQQAVPVKTAWLESCFSKQQQVKTAHFQHQL
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatattggggaaaataagaaacaccataaccgagagaaagaagacggctctc
agtcagcgcgacctgcagacgtttggtttacgagggatacagctgagagcctaccagctg
gacggggtgcagtggctgacccagagcctcaacgaccagcagggctgcatcttaggggat
gagatgggtttgggtaaaacctgccagaccatctctctgctggtgtacgagtcaggagct
ctggggaagaaaggtccgtttctggtgctgagccccctgtctgtcatggagaactggaga
aaggagttggaaagctttgccccgtctctgactgtgctgtgctacaaaggagacaaagag
agacgggctgagattcagagggaaaaaaccgctcaggacttccgggttctgctcaccacg
tacgagctgtgcctcaaagatgcatcgttcttgaaaaggtggaggtgggaggtgctcgtt
gtggacgaagctcaccggctgaagaaccaaaactctctgctgcacaaaaccttgacagag
ttttcagttggtttcagactcctgctcacagggactcccgttcagaacaacctgcaggag
ctctactccctgctgagcttcattcaacccagcatcttcacaccggaagaggctgacaac
tttgtcagctcctactccgatgtgcgaagtcgacctgctctggcttcagagcttcaaagc
atcttggagccttttctactccgcagagtaaagtcagaggtgacttttgatctgcccaag
aagacagagctggtggtgtaccacggcatgtctgctttgcagaagaaatactacaaagcc
attctaatgcgcgattatgaggcttttgtaaacgagcaaggcagcaagaaccgactgctg
aacatcttggtgaatttgagaaagtgcgtcgaccacccatacctgtttgacggggtggaa
ccggagcccttccagatcggggatcacctcatcgaagccagtggaaagctgtgcctgctg
gacagcatcctggcctttctacacacagggggccaccgtgtcctgttgttctctcagatg
acgaggatgctggacatccttcaggactacatggagtacagaggttacagctacgaacgc
atggatgggtctgttcgaggcgaagagcgaaaccttgctgtgaagaacttcagcagcaaa
gatatctttgtgtttttgctcagcactaaagcaggcggagttggcctcaaccttacagct
gctgacactgttgttttcgtggacagtgacttcaacccccaaaacgacctgcaggccgcg
gcgcgatgccatcggattggccagaacaggcctgtgaaagtgatccgcctccttgcgaga
gacaccgtggaggagatcatgtactctcgagccgtatccaagctgcagctcaccaacact
gttattgaagagggccgcttctctttgctggatcaggcgcagtcagctgcggcgggtctg
cagctgagcgagatcttgaagttcggagtagataagcttttatcgtcggaggagagctcg
atacaggaagtcagactggagaagatactgggcccgtcacgggatggtcagtgggtggat
gatgatgatgatgatggattctcaccactagaagaagaggtggagaacgagtctgattcc
gttgagcagaatcacatgtacttctttgaggggaaagactacagtaaggacccgagctca
gaggaccagaggagctttgaccggatcctggaagagcagatggccgagtttcagaaagcg
gcaggagagggacgagctctgcggcgcaaagctggatcttcgctttcagtcgcgtttgcg
attccagcgaggaagaggaaacctctcactgaggcagagctggagctcaggcggcagaag
aggcaggaggctgcagccaagagagccaagatgatggaggacaaaaagaggcaggaggaa
gaggagaagcgcaggaaaaaaatggcctggtgggagtcctgtggctataagtcactttgc
ctgcagcttgtagacagtgaagaagaggaggaagacgaagaggaggaagaggatgacatc
agcgtatgctctacagactcaacctccacggatatccgctacgttctgggggatgttact
catccccacactgcgaggggagatgctatcatcgtccactgtgttgatgactcagggcgg
tggggcagaggaggcctgttcacggcgctggaggtgagatcagatgagccacgaaagcgg
tacgagttggcagggaaaatgaaagatttggagctgggaaatgtgctgctcttccccatc
gacgacaaacagtcgagactggacggccgagatcagttagccctgatagtggcacagaaa
agagacaaagccaacaacctgtctgggatcctcctcggtgctttggacgaaggactgaag
aagatttactctgcagctaagaaaaacaaagccagtgttcatcttcctcgcatcggtcac
tccaccaaaggtttcaactggtacgggacggagcggctcatcagaaaacacctggcctcc
aggggcattcccaccttcatatattatcacagcagagctgtcaagaaaacagtttctcat
cagacacctgcaccatcagctgctgcgtccaatcaagcacctttaccgagcacagaggga
ccaacggatgagacagaaaccgagggccccggtccgtccgctctgccacgcagcttcagc
cctgcggagctgcccagcttcatgaagggagtccgagtgtttttctacaacattcccgca
tcagaacggaagaggttggcccgctaccttatcacgtatgacggagacgaggaggacgtc
atgagtgaagaggtcacacacattgttgcagaggtggagaatcacatccaaatacaggag
ctgctggatctggtccataagaaccagcaggctgttcctgtgaagacggcctggctggag
tcctgcttctccaaacaacaacaagtcaaaactgcacacttccaacatcaactctga
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