Xiphophorus couchianus (Monterrey platyfish): 114150709
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Entry
114150709 CDS
T05908
Symbol
ddx49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114150709 (ddx49)
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114150709 (ddx49)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
90S particles
Helicases
114150709 (ddx49)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
114150709
NCBI-ProteinID:
XP_027883131
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All DBs
Position
9:27080404..27091936
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AA seq
475 aa
AA seq
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MSDLSSVGLSDWLVKQCKQLGLNKPTPVQENCIPPILEGRDCMGCAKTGSGKTAAFVLPV
LQKLSEEPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLRDCIVVGGMDMVSQAVELSNQ
PHVVVATPGRLADHIRSSDTFNMRKIKFLILDEADRLLEQGCTDFTKDLQVILSVLPAKR
QTLLFSATLTDTLQELKSIAMNKPFFWESTSETRTVEELDQRYILTPEKVKDAYLVHLIQ
TFTDQHDDWSIIIFTNTCKSCQILTMMLQAFNFPTVCLHSMMKQKQRFANLAKFKASVYK
ILIATDVAARGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRNGVSITLVTQYDIHLV
HSIEEQTKTKLKEYPMEEKEVLKILTQVNVTRRECEIRLESTDFDEKKEINKRKQLILEG
KDPDLEAKRKAELQKIRSQKKKFKQKIQESIQRQKHGQLKKRKQTKNKKAELTAS
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacttgtcgtccgtgggcctgtcggactggctggtgaagcaatgtaaacagctg
gggctcaacaaacccactccggttcaggaaaactgcatcccacccatcctggaagggcgc
gactgcatgggctgcgccaagacgggaagtgggaaaacggcggccttcgtgttgccggtg
ctgcagaaactgtcggaggagccgtacggcatcttctgcctggttctcactcccaccagg
gagctggcctatcagattgcagagcaattcagagtcctgggcaaacctctgggtctgaga
gactgcatcgtcgtcggaggaatggacatggtgagccaggccgtggagctgtccaaccag
cctcatgttgtcgtggcaacgccgggtcggctggccgaccacatccgcagctccgacacc
ttcaacatgagaaagatcaagttcttgattttggacgaagcggaccggctgctggagcag
ggctgcaccgacttcaccaaagacctgcaggtgatcctgagcgtcttgccggccaaacgc
cagacgctgctgttcagcgccacgctcaccgacaccctgcaggagctgaagagcatcgcc
atgaacaagcccttcttctgggagagcacgtccgagacgcggacagtggaggagctggat
cagaggtacatcctgactccagagaaggtgaaggacgcgtacctggtccatctgatccag
acattcacagaccagcatgacgactggtccatcatcatcttcaccaacacctgcaagagc
tgccagattctcacgatgatgctgcaggcgttcaactttcctacagtctgcctgcactcc
atgatgaaacagaaacaacgattcgccaacctggccaagttcaaggccagcgtctataaa
atcctgatcgcgacggatgtggctgccaggggtttggatattccaacagtccaggtcgtc
atcaaccataacaccccaggacttcccaagatctacatccaccgagtcgggagaacagcg
agagcagggaggaacggagtgtcaatcacactggtgacgcagtacgacatccatctggtg
cattcgatcgaggagcagaccaagacgaagctgaaggaatatcccatggaggagaaagaa
gtcttgaagatcctcacacaagtcaacgtgactcggcgggagtgtgaaattaggctggaa
tcgacggactttgatgagaaaaaggagattaacaagcggaaacagctgatcctggagggg
aaggacccggacctggaggccaagaggaaggccgagctgcagaagatccggagccagaag
aagaaattcaagcagaaaatccaggagagcattcaaagacagaaacacggacaactgaag
aagagaaaacagaccaagaacaaaaaggcagagctgaccgcatcataa
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