Xiphophorus couchianus (Monterrey platyfish): 114150720
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Entry
114150720 CDS
T05908
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03010
Ribosome
xco04120
Ubiquitin mediated proteolysis
xco04137
Mitophagy - animal
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
114150720 (uba52)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114150720 (uba52)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114150720 (uba52)
04137 Mitophagy - animal
114150720 (uba52)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xco03011
]
114150720 (uba52)
04121 Ubiquitin system [BR:
xco04121
]
114150720 (uba52)
Ribosome [BR:
xco03011
]
Ribosomal proteins
Eukaryotes
Large subunit
114150720 (uba52)
Archaea
114150720 (uba52)
Ubiquitin system [BR:
xco04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
114150720 (uba52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
114150720
NCBI-ProteinID:
XP_027883153
UniProt:
A0A3B5L554
LinkDB
All DBs
Position
9:27012518..27014755
Genome browser
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaaaacgttgacggggaagaccatcacccttgaggttgagcccagc
gacactatcgaaaatgtcaaggcaaaaatccaagataaggaaggtattcccccagatcag
cagcgtctgatctttgctggaaaacagctcgaagatggacgcacactgtcagactacaac
atccagaaagaatcaaccctccacctggttctccgtctgcgtggcggcatcattgagccg
tcactcagacagctggcccagaagtacaactgcgacaagatgatctgccgcaagtgctac
gcccgtctgcaccctcgtgctgtgaactgtcgcaagaagaagtgcggacacaccaacaac
cttcgccccaagaagaagctgaagtaa
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