Xiphophorus couchianus (Monterrey platyfish): 114150764
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Entry
114150764 CDS
T05908
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xco01002
]
114150764 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114150764 (usp42)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114150764 (usp42)
Peptidases and inhibitors [BR:
xco01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
114150764 (usp42)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
114150764 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
114150764
NCBI-ProteinID:
XP_027883233
LinkDB
All DBs
Position
9:3311619..3327248
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AA seq
1171 aa
AA seq
DB search
MTIVDRLSEKSDHESVGFNRSFTSGDVGMDGSCSSSWAVGPSMPGDSPRLKPSGGCLGPT
PGAAVYNGTPASMDRPKDQVMSSEDGIELPQKVLFPPERLSLKWIQVHRIGAGLQNMGNT
CFLNSALQCLTYTPPLASFMLSREHSKTCHEPGFCMMCTMQNHIIQVFANSGNVIKPIGV
LNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATTFIHQVFGGYLRS
RVKCLNCKSVSDTFDPFLDITLEIKTAPSVSKALEQFVKPEQLDGENAYKCTKCKKMVTA
SKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPEYLELRPFMSQSQEEPQIYGLYAVL
VHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLFYIKSCNVKKTGE
FSNVSHNPGMSGQSSPRPVVTPRIHTAVHHGNTGFIGPQLPPHMTKNTLHVNGNGSLRDY
PSSSKASSSAVGKPSHGLASSSISRPTSIPDQEKRQKLSFFIGQGKQNRASSSSAYSHPS
SASSSSSSSLSSSQSTSDVHFVPRQLNHFNGTPSSNGDQPARGNGSSLLVPYSQESSEES
DQENGTTQDAGCISKPQTKGTNGTGDVCASSSKNTNGEIDVCYNSSEVNGSTSEFTKTNQ
NGQFNGHHKVNGHNTHEKGSIHNQDSSAVNAVANGLGSDHNEPNKELVDLASSQTCSAQS
VPPAANEREPLSAAVDERAKTLPEPLPPPHHTSSSPVSSSPSATTSKTHAVAPRDLSAFP
SEPVCCQSVNGISTAAQNISKSEEEVKDSSQTNGPSARTDGGTENKGQSQSKPGSRGHER
QSSHDRDRDRFYSDYSKDRDKHYRDRSPPRESYSDRHRYRRDYRDHHRSYRDRFPPERSY
WDFDRRKERLGSHSWEHDRDRRSYHSSHYYHKYDGSHERRGYPQPQECHSYWRSQKDSRE
SWAMKDKRNGWDREERSSSPAATALEINKSKVSPPWDRLCNFNSTLKREEPSDKRPAAHL
RKEREDSSEGRRSKKHKKSKKKKKSKDKDMHHESSSDPDSDRATESRKKKKKKRRHRDSD
SDSGRGHANRSSKERENRKRHHSDTKDSRYDKDFLPEKRQRTDCSDGSRDQPLPPHHNAL
SNHSAHQHLNGHTGNGRTNGDFHGCSSGLKQ
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacagattgtcagaaaaatctgaccacgagtcagttggatttaaccga
tccttcaccagtggagacgtggggatggacggcagttgttccagcagctgggcagtgggt
cccagcatgcccggtgactctcctaggctcaagccttcaggaggctgcctgggtccgacc
ccgggtgctgccgtctataacggcacacccgcctctatggaccgccccaaggaccaagtg
atgagcagtgaagatggcatagagctgcctcagaaggtcctgtttcctccagagcggctc
agcctgaagtggatccaagttcaccgcattggtgccggcctgcagaacatggggaacaca
tgcttcctcaactcagccctgcagtgcctcacctacactccaccgctagccagcttcatg
ctgtcaagagagcactccaaaacctgtcatgagcctggattctgcatgatgtgcaccatg
caaaaccacatcattcaggtttttgctaactctgggaatgtcattaagccaatcggtgtc
ctcaatgagcttaaaagaattgcaaagcacttccgctatggaagccaggaggatgctcat
gagttcctgcggtacacagtggacgctatgcaaaagtcctgcttacctggaaccaaattg
gacaggcaaacgcaggccaccactttcatccatcaagtgtttggagggtacctcaggtcc
agagtgaaatgtctgaactgcaaatcagtttctgatacatttgatccttttctggacatc
acgctggaaattaagacagcacccagtgtctccaaagctctggagcaatttgtcaaacca
gaacagctggatggagaaaacgcctacaagtgcaccaagtgcaaaaaaatggttacagcc
tcaaagagattcacaatccaccgcagtcctaatgtgctcactctctcactaaaacgattt
gcaaacttcactggaggaaaaatcacaaaggatgttaaatatccagagtacctggagctg
cggcccttcatgtcccagtctcaagaagagcctcagatctacggcctgtacgctgtgctg
gtccactccggcttcagctgccacgctggccattacttctgctacattaaggccagcaac
ggtcagtggtaccagatgaacgactcgtctgtctctgtgagcgacatccgctcagtcctc
aaccaacaggcctacgtccttttctacattaagtcgtgtaatgtgaagaaaactggggaa
ttcagcaacgtgagccataacccaggtatgtctggtcagtcgtctccccggccggtggta
actcctcgtatccacaccgccgttcaccacggcaacactggcttcatcggcccccaacta
ccaccacacatgaccaagaacactctccatgttaatgggaatgggtctttgagggactat
cccagcagttctaaggccagcagcagtgcagttggcaaacccagccacggcctggcttct
tcctcaatcagccgacccacatccatcccagaccaagagaaacgacagaagctttcgttt
tttattggacaaggcaaacagaaccgagcatcttcctcatccgcctacagccacccatcc
tctgcaagcagctcctcctccagctcgttatcttcctcgcagtctacctcagacgttcac
tttgttccgcgtcagctaaaccactttaacggcacacccagcagtaacggcgaccaaccc
gccaggggcaacgggtcgtctttactggtgccgtacagtcaagagtcctctgaagaatcc
gaccaggagaacggtaccactcaggatgctggctgcatatccaagcctcagacgaaggga
actaatggaacaggagatgtgtgtgcctcttcttctaaaaacacaaatggtgaaatagat
gtctgttataacagcagtgaagtgaatgggtcaacctctgaatttacgaaaacaaaccaa
aatggacaatttaatgggcaccacaaagttaatggacacaacacacatgagaagggatcc
atccataatcaggacagttcagctgtgaatgctgttgccaatggacttggcagtgaccac
aatgaacccaacaaagagctggttgacctggcctcatcgcagacctgttcagctcagagc
gttcctcctgctgctaatgaaagagagcccctctctgctgctgttgatgaaagggctaaa
acgctgcctgaacctcttcctcctcctcaccacacctcatcctctcctgttagctcctca
ccttcagctactacttccaagacgcacgctgttgcacccagagacctgtcagccttcccc
tcagagccagtctgctgtcaaagtgttaatgggatctctacagctgctcagaatattagc
aaatccgaggaagaagttaaggattcctcgcagaccaacggcccatcagcacggacagac
ggtggtacggagaacaaggggcagagccagtccaagcccggttctagaggccatgaaagg
cagtcctcccatgacagggacagagacagattctactctgactatagcaaagacagagac
aaacactacagggacagaagtccaccacgagaaagttacagcgatcgccatcggtatagg
cgagactaccgggatcaccatcgctcctacagggatcgatttcctcccgaacggagctac
tgggacttcgaccgccgcaaggaacgactcggctcgcactcctgggagcacgatcgtgac
cggcgctcgtaccattccagccattactaccacaagtatgatgggagccatgagaggagg
ggatacccacaacctcaagagtgtcacagctactggcggtcgcaaaaggacagtcgggaa
tcctgggcaatgaaggacaaaaggaatgggtgggatagggaagaaaggagttcctcccca
gctgctactgctctagaaataaacaagtccaaggtttcccccccctgggaccgcctctgt
aattttaactccactcttaagagggaggagccgagtgacaagaggccagctgctcatcta
agaaaggagagagaggacagctcagagggccgccgctccaaaaaacacaaaaaaagcaag
aagaaaaagaagtcaaaagataaagacatgcaccacgagagcagctctgacccggattca
gacagagccaccgagagcaggaagaagaaaaagaagaagaggcggcacagggacagcgac
tccgattccggacggggccacgccaacagaagcagcaaagaaagagagaaccggaagcgc
catcactctgacaccaaggactccaggtatgacaaagactttttaccggagaaacgtcag
cgcacagactgcagcgatggcagcagggaccagcctctcccacctcaccacaacgctctc
tcaaaccattcagctcaccaacatctcaacggacacacaggaaatggtcgaaccaatggt
gacttccacggatgctccagtggcctcaagcagtga
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integrated database retrieval system
