Xiphophorus couchianus (Monterrey platyfish): 114150892
Help
Entry
114150892 CDS
T05908
Symbol
lsm2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03018
RNA degradation
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114150892 (lsm2)
09123 Folding, sorting and degradation
03018 RNA degradation
114150892 (lsm2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114150892 (lsm2)
03041 Spliceosome [BR:
xco03041
]
114150892 (lsm2)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114150892 (lsm2)
mRNA degradation factors
5'-3' decay
Lsm complex
114150892 (lsm2)
Spliceosome [BR:
xco03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114150892 (lsm2)
Complex C
U2 snRNP components
114150892 (lsm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
114150892
NCBI-ProteinID:
XP_027883469
LinkDB
All DBs
Position
9:complement(23156622..23158634)
Genome browser
AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEAMQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgcttttctactcgtttttcaagtctctggtgggaaaggacgtggtggtggagctcaaa
aacgacctgagcatctgtggaacgcttcactctgttgaccagtacctgaacatcaagttg
acagacatcagcgtcacagatccagagaaatatccacatatgctgtcagtgaaaaactgc
ttcatccgtggatcggtggtccggtacgtccagctgccggccgacgaggtggacacgcag
ctgctccaagacgcggcgcgaaaagaagccatgcagcagaagcagtga
DBGET
integrated database retrieval system
