Xiphophorus couchianus (Monterrey platyfish): 114150940
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Entry
114150940 CDS
T05908
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114150940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114150940
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114150940
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
114150940
NCBI-ProteinID:
XP_027883556
LinkDB
All DBs
Position
9:complement(566657..593817)
Genome browser
AA seq
1271 aa
AA seq
DB search
MAALFSPEVKLILFTVLFLMISADAKEKGLKTLKRAKREWILPPAKLKENHNYTHLEFIA
KIRSDRDKQRRVEYSLTGAGADKPPFNLFVVDHNTGFIRITDILDREKYPSYNLTGIAKF
KDGISAEENIPLTVTVLDENDNPPYFVLHKGNVTEASREGTFVMQIEGKDDDEAGTINSE
IVYTIISQEPAGKGHMFTIDKKTGKLFVKESTLDREAYDFYKLVVKGTDMGGAPSGKTGT
GTVEIKVTDINDNIPTLEKSEYAGSVDENVADVVVMRIKALDKDLLHTNNWLTVFTIAQG
NEDNLFSIETDKETNEGILKLIKPVDFEEVQNLELGLIIENVAPFVEGGPIKMDVDVQVG
EGGPLAAGAAAGAGAGVGVGVGVGAGVDLGVDLGLDVGLDADLGVDAGLDAGLDAGLDVG
LDVGLDAGLDAGLDAGLDAGLKPQGGAGPGVGLKPAVGPGVGVGLKPGIKPGLKPGPRPG
SKPKPKAPGKSYPIKIAVNNVPEGPAFRPDTKKVPVSEDPNEAPADGVITSFPAVDPDTG
KVADDVSYAKAYDPDNWFTVDEETAEIKLNKQPDRESPFLVNGTYIAKILAISKDMPAKT
ATGTIAIQVTDSNDHCPTLTTTYTSLCSDKKTVYVTAFDEDVSPNAAPFTFQIIPEGTRG
NWEIEVINDTTAALHSAKALWPGRYELQVEVKDAQGLSCKEERVFTVDVCTCVGKEDCRS
KASRGEARSSDFSRRAIGPIVTALFLLMLIPLLLVFCQCGGANTIFSDQFSDLPFDTKEH
LINYHTECIGEDKDVPVHLMPVMYGTQQKTEAAPGPNFNTSSSAAFTETLKNETYYESDQ
IFQPTSTKMVDTDIDYRVSTEFYNPSNEIDSFSRKTQSIHQIGCFEDIALPDVILNDYFS
QKSTITVPSEDILLEYDFEGKGSSAGSVGSCSILEPDNDLNFLTDLGPKFRTLAEICSPP
TLTSKAMVIQKASGSVKTTTDITEPVFKPKFNYEIQAKHVDDKAEKVVSSAKVVQSHVST
TTKESTTKQLTTTTLPHSTSTNISHSAKLSYPAQTVVLQQPPVYYTASPVLQPMHYIVQP
NVQNTFVLEDGTHANTFPGLYVINDPKSMSGLVYGRTQSSLSGLVIQDTEGPKSPISPVS
PTGSLRTTVLLPSPTFSQGCVEGSTLYGQNLGGNYVLLKDEVQEWGPGSPQGILPGDAIL
VKKAAPPQGVLGLAAQENVCISSFCYFLVKKANGGGGVIVTGGISFGSFSVLKYLTKQQR
MWIWLNKVKVD
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atggctgcactgttttctccagaagtgaagctgatcctcttcacagtgctgttcttgatg
atcagtgctgatgcaaaagagaaggggttaaaaacactgaaaagagcaaaaagagaatgg
atccttcctcctgccaagctgaaggagaaccataactacacccatctggaattcattgca
aagatccgctctgacagagataaacagaggagggtggaatactccctgacaggagcagga
gctgacaaaccccctttcaatctgtttgtggtggatcacaacacgggatttatacgaata
actgatattctggacagggaaaaatatccttcatacaatctaacaggcattgctaaattc
aaggatggaatttcagcggaggaaaacattcccctgactgttactgtactggatgaaaat
gataatcccccttattttgttctccacaaaggcaatgtcacagaggcaagcagagaagga
acatttgttatgcaaatcgaaggtaaggatgatgatgaggctggaacaataaattcagag
atcgtctacaccattatcagtcaagaaccggctggcaaaggtcacatgttcactatagac
aaaaagacagggaaattatttgttaaagagtccactctggacagagaggcatatgatttc
tacaagctcgttgttaaaggaactgatatgggaggtgcaccatcagggaaaacagggaca
ggaactgtggaaatcaaagtcacagatatcaatgacaacatccccactctagaaaaatca
gagtacgccggctctgtggatgaaaatgttgctgatgttgttgtgatgagaatcaaagct
ttggacaaagaccttctacacacaaataactggctgactgtatttaccattgcccaagga
aatgaggataacctgttttccattgaaacggacaaagaaaccaacgagggtatcctaaag
ctgatcaagccagtggattttgaagaagtacagaatcttgagctgggccttatcattgaa
aatgtagctccttttgtagaaggtggcccaataaaaatggatgtggatgttcaggttgga
gaggggggtcctctggctgctggagcagctgccggagccggagccggagtcggagtcgga
gtcggagttggagctggtgtggatttaggagtagacctcgggctagatgtgggcttggat
gctgatctaggtgtagatgcaggtctggatgcaggtctggatgcaggactggatgtaggt
ctggatgtaggtctggatgcaggtctggatgcaggtctggatgcaggactggatgcagga
cttaaaccacagggaggagctgggcctggagttggacttaagcctgctgttggacctgga
gttggtgtggggcttaagccaggtattaaacccggtctcaagccagggccaagaccagga
tccaagcctaagccaaaagcaccaggaaaaagctatcctataaaaatagctgtaaataat
gtgccagagggtccagcatttagacctgacaccaagaaagtacctgtatctgaggatcca
aatgaggcaccagcagacggtgtgattacttcgttcccagcagttgatccagatactgga
aaagtagctgatgatgtcagctatgccaaagcttatgatccagataactggtttactgtt
gatgaagagacagcggaaattaaactcaacaaacaaccagaccgagagtcacccttctta
gtgaatggtacctatattgccaaaattttggcaatatcaaaagacatgccagcaaagaca
gccactggaacaatagccattcaagtcactgactccaatgaccactgtcccactttgacc
actacttacaccagtctatgctctgataagaagactgtgtatgttactgcatttgatgaa
gatgtcagtccaaatgctgctccattcacttttcaaattataccagaaggtactcgaggc
aactgggaaatagaagtcatcaatgatacaacagctgctcttcattcagccaaagcactg
tggcctggcagatatgaactccaagtagaggtgaaagatgctcagggtctgtcctgcaaa
gaggaacgggtgtttactgtggatgtctgtacctgtgtgggaaaagaagactgcagatca
aaggcatcgaggggagaagcccgttcatctgacttttctagacgtgccattggtccaatc
gtaacagctttgttcttattgatgttgatccctctgctgctggtgttttgtcagtgtgga
ggggcaaacaccatcttctcagaccagtttagtgatctgccatttgacactaaagagcac
ctaataaactaccacactgaatgcataggagaggataaggatgttcctgttcatttgatg
cctgtcatgtatggtacccaacaaaaaactgaggcagcaccaggaccaaatttcaatact
agttcttcagcagcattcacagaaacacttaagaacgaaacctactatgaatcggaccaa
atatttcagccgacttccacaaagatggtggacactgacatagactacagggtttcaact
gagttttacaatccaagcaatgaaattgactcattcagccgaaaaacacagagtattcat
caaataggttgctttgaggacatagcccttcctgatgttattctcaatgattacttctcc
cagaaatctacaattacagtgccatctgaagacatcctcttggaatatgactttgagggc
aagggctcctctgctggttcagtggggagctgcagcatcttagaacctgacaatgacctg
aactttctcactgaccttggaccaaagttcaggacacttgctgagatctgttcgcctcct
acactaacatcaaaagcaatggtgatacaaaaggcatcaggatctgtcaaaaccaccact
gatatcacagagcctgtctttaaacctaaatttaactatgaaattcaggcaaagcatgtt
gatgataaagctgaaaaggtagtatcatctgcaaaggttgttcaatctcatgtcagtaca
acaaccaaagagtcaacaaccaaacagttgacaaccacaactctccctcactccactagt
actaacattagtcattctgctaaactttcttatccagctcagacagttgttttacagcag
ccaccagtttactacaccgctagccctgtactacaaccaatgcattacatagttcaacct
aatgtacagaacacatttgtgctggaggatggaacccatgcaaatacgtttccaggcctc
tatgttatcaatgatccaaagagtatgtctggattggtttatggaagaacccaaagctcc
ctttcagggcttgttatccaggacactgagggccctaaaagtcctataagtcctgttagc
cccacaggttcactccgaaccactgtcttattgcctagtccaactttctcccagggctgt
gtggaaggctctacattatatgggcaaaatcttggtggaaattatgtgttactcaaggat
gaggtacaggagtggggcccaggttcacctcaaggcattttgcctggagatgctatcctg
gtaaaaaaggctgctccccctcagggggttttaggtttggcagcccaggagaatgtgtgt
atttcttcgttttgttattttttagttaagaaggctaatggtggtggtggtgttattgtg
acaggggggataagctttgggtctttcagtgttttgaaatatctcactaagcagcaaaga
atgtggatttggttgaataaagtaaaagttgattaa
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