Xiphophorus couchianus (Monterrey platyfish): 114150954
Help
Entry
114150954 CDS
T05908
Symbol
rubcn
Name
(RefSeq) run domain Beclin-1-interacting and cysteine-rich domain-containing protein isoform X1
KO
K19330
run domain Beclin-1 interacting and cysteine-rich containing protein
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
114150954 (rubcn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114150954 (rubcn)
Membrane trafficking [BR:
xco04131
]
Autophagy
Other autophagy associated proteins
Others
114150954 (rubcn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUBC_PIKBD
RUN
CMD
LRRFIP
Motif
Other DBs
NCBI-GeneID:
114150954
NCBI-ProteinID:
XP_027883593
LinkDB
All DBs
Position
9:complement(9491653..9515507)
Genome browser
AA seq
983 aa
AA seq
DB search
MMEVTAEGEAEERRREQWKLLSSLKTTVEGLVSTNNPNVWSRYGGLQRLHKDMNNILGHR
LKNEQMYYKQRDYWPFVWCVRYISPNLAMHVEQFSHLEPVLSSGVHRAGESHKAERWLLH
SLQVHKLSAQLKPLLRHLGNTRKYYNDDAFLLSEPHVTAMFQCLEAVEQNNPKLLAQVDT
VGLSPLKGSSCLSLLKSQSLCVLPGAGGTWRNADTAPGGDSLNRRLTTSNCSLREAVAAN
HRPANTTAARSVKGNNMSEESINTKYTTSSASSVETPWVIVSRPGDGERGGTPSPGSISV
PHISLSESPSSSVQPEAGDSCDGDSDDGPEYLAIGNLGQRSRCDSRSSIHSSEQDQTKEP
GTQQSSQTSTPPRCSSFSEGQRGPGRGAKGHTRSFSDTGISQKLRNGGGHRKITIIIEDP
VAESASEDSSMKDYSPFSPQRSNTSTPSSLYMESYGPQYSSVPDGMFRKPSKGQSLISYL
SEQDFGSCADLEKENAHFSISESLIAAIELMKYNMLRQEEEGEEEGDSDSEIQQLKQKIR
LRRQQIRRSRLPPYTTSQHHFHSTDSGGSRRSSQDSYQGLSDSGSAEEVEECELQDGCEG
QSLLAVSQSGLSLSLASLFSDADIKRSVSSSGRSFLSSESISPSFLQSNSAESVAMGLLR
QFEGLQLPAASELDWLVPEHDAPQKLLPIPDSLPISPDDGEHADIYKLRIRVRGNLEWAP
PRPQIIFNIHPAPKRKIIVAKQNYRCAGCGTRIDPDYIKRLRYCEYLGRYFCQCCHENAQ
AIVPGRVLRKWDFSKYYVSNFARDLLSKISGDPLFNPSDINNGLYKKIKSLESVRVLRVQ
LFHMKNLFKTCRFARGVLDQLDSVPGHLTEDLHLFSLNDLTAVRNGELAPRLKELLKLGT
MHVAGCVLCQAKGFVCEFCNNDKDIIFPFQLSKCQRCEECHACYHQSCFRTGKDCPRCRR
LAERRERMARRNMEEQEDEGGGT
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggttacggcggagggagaggcggaggagcgcaggagggagcaatggaagctg
ctgtccagcctgaagaccacggtggagggcctcgtgtcaaccaacaaccccaacgtctgg
tcgcggtacggcggcctgcagaggctgcacaaggacatgaacaacatcctcggtcacaga
ctgaagaacgagcagatgtactacaagcagcgagactactggccctttgtttggtgtgtt
cgctacatcagccccaaccttgccatgcacgttgaacagttcagtcacctggagccggtt
ctgagcagcggggtgcacagagccggtgagagccacaaggccgagcgctggttgctgcac
agcttgcaggttcataagctgtcagctcagctcaaacctctgctcaggcatttgggaaac
acacggaaatattacaacgacgacgccttcctgctgagtgagcctcatgtgacggccatg
tttcagtgtctggaggctgtggagcagaataatcccaaactgctggcccaagtagacact
gttgggctttccccgctgaaaggctcttcgtgcctgagtctgctgaagagccagagcctg
tgtgtgctgccaggggccggggggacctggaggaatgccgacacggcccctggaggagac
tctctgaaccgcagactaaccacctcaaactgctccctgcgagaagcggtcgcagccaac
cacaggccagcaaacactacagcagctagatccgttaaaggcaacaacatgagtgaggaa
agcatcaataccaagtacactacctcttcagccagcagcgtggaaactccgtgggtgatc
gtatccagaccgggggacggtgagcgcggtgggacgccgtctcctggatcaatttccgtc
cctcacatctccctgtcagagtccccatcctcctccgttcagcccgaggccggggactcc
tgcgacggtgactccgacgatggaccggagtatctggctatcggtaacctggggcaacgc
agtcgttgtgattctcgaagctccatccacagcagtgagcaggaccagacaaaggaacct
ggcacacagcagagttcccagacctcgaccccgccgaggtgctcgtctttctcagagggc
cagaggggtcctggcaggggggccaaaggacacacccgctcgttttcagacacggggatc
agtcaaaaactcaggaatggagggggccacagaaaaatcaccataataatagaggatcca
gtagcagaatcagcaagcgaagactccagcatgaaggactacagtcccttctctcctcag
cgcagcaataccagcacacccagttccctttacatggagtcctatgggccccagtacagc
agtgtgccggatgggatgttcaggaagccgtcgaaggggcagagcctcatcagctatctg
tcagagcaggactttggcagctgtgctgacctagaaaaggaaaatgctcatttcagcatc
tcagagtccctcatcgccgccattgagctgatgaaatacaacatgctgcgccaggaggaa
gagggtgaggaggagggagacagcgactccgagattcagcagctcaaacaaaagatccgt
ctgaggaggcagcagatccgccgcagccgtctgccaccctacacaacctcccagcaccat
ttccactccactgacagcggaggctccaggaggagctctcaggactcctaccagggcctg
tctgactccggctcggccgaggaggtggaggaatgtgaactgcaagatggctgtgagggt
cagtccctgctggcggtgtctcagagcggcctctccttgtcactcgcctccctcttctca
gatgcagatataaagcgcagtgtaagctccagtggcaggtccttcctgagctcagagtcc
atctctccctccttcctccagtctaactcagctgagtcggtggcgatgggtttgctcagg
cagttcgagggcctgcagcttcctgcagcttcagagctcgactggctggttccagagcac
gatgctccacagaagctgctgcctattcccgactctctgcccatctctcctgatgatgga
gagcacgcagatatctacaagttgaggattcgagttcgaggcaaccttgagtgggcgccg
ccgagaccacaaatcatcttcaacattcatcctgcaccaaagaggaagatcattgttgcc
aagcagaactaccgctgtgctggatgtggcaccagaattgacccagactacatcaagcga
ctgcgatactgcgagtacctcggccgctacttctgccagtgctgccacgagaacgcccag
gcgatcgttcccggccgagttctcagaaagtgggacttcagcaagtactacgtcagcaac
tttgcccgagacctgttgagcaagatttcaggagaccctctgttcaacccgagtgacatc
aacaacggcttgtacaagaagatcaagtctctggagtctgtcagggttttaagagtgcaa
ctttttcacatgaaaaatctcttcaagacttgtcgctttgccagaggggttcttgaccag
ttggacagcgtgccaggtcacctgaccgaggaccttcaccttttctcgctcaacgatctc
actgctgttcgcaacggagaactggctcctcggttgaaagagctgcttaagcttggtacc
atgcatgtagctggttgcgtgttgtgtcaggcgaagggctttgtttgcgagttctgcaac
aacgacaaagacatcatcttccccttccagctcagcaagtgccagcgctgcgaagagtgc
cacgcctgttaccatcagagctgcttcaggacaggtaaagactgcccccggtgtaggcgg
ctggcggagcgtcgggagaggatggcgcgcagaaacatggaggagcaagaggacgaagga
ggagggacttag
DBGET
integrated database retrieval system
