Xiphophorus couchianus (Monterrey platyfish): 114151045
Help
Entry
114151045 CDS
T05908
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase isoform X1
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco00260
Glycine, serine and threonine metabolism
xco00270
Cysteine and methionine metabolism
xco00450
Selenocompound metabolism
xco00670
One carbon pool by folate
xco01100
Metabolic pathways
xco01230
Biosynthesis of amino acids
Module
xco_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
114151045 (cth)
00270 Cysteine and methionine metabolism
114151045 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
114151045 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
114151045 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xco04147
]
114151045 (cth)
Enzymes [BR:
xco01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
114151045 (cth)
Exosome [BR:
xco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114151045 (cth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_1_2
Met_gamma_lyase
Beta_elim_lyase
Aminotran_5
GDC-P
Phage_gp53
Motif
Other DBs
NCBI-GeneID:
114151045
NCBI-ProteinID:
XP_027883728
LinkDB
All DBs
Position
9:10155089..10167659
Genome browser
AA seq
424 aa
AA seq
DB search
MAQSNKQEAGDLFAGFRTGFKSFATDAIHIGQEPEQWSSMAVVPPISLSTTFKQHSPGNH
AGFEYSRSGNPTRNCLEKAVAALDGAKHCLAFASGLAATVTITHMLKKGDGIICMDDVYG
GTNRYFQRVAAGFGLETTFADCTKPELLKAALKPNTKLVWIETPTNPMMKVVDIKACSDL
VHEHSKEIVVVVDNTFMSSYFQRPLALGADICMYSATKYMNGHSDVVMGLVSLNNDDLNE
RLRFLQNAIGGVPSPFDCYLCNRGLKTLHLRMEQHFKNAMAAARFLEADARVERVIFPGL
SSHPQYEMMKKQCTGCPGMITFYIKGKLEHATTFLSNLKMFAVAESLGGYESLAEHPAIM
THASVPANERAILGISDTLIRLSVGLEDTADIIKDLDQALNAALSETAWNPASAHKDKVN
DFVD
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtcaaataaacaggaggctggcgatttgttcgctggcttccgcacgggtttt
aaatctttcgccacagatgccatacacatcggccaggagccggagcagtggtcatcgatg
gctgtagtaccgccgatttccctctctaccaccttcaaacagcactcaccggggaaccac
gctggctttgagtacagtcggagtggaaaccctaccagaaactgtctggaaaaggctgtg
gcagcgctggatggagcaaaacactgccttgcttttgcctcaggactggcagccactgtg
accattacccacatgctgaagaaaggagatgggatcatctgcatggacgatgtgtacgga
ggtaccaaccgatacttccaaagagtcgcagctggatttggtctggaaacaacttttgct
gactgtacgaagccagagttgctgaaagctgctctgaagcccaacactaaactggtgtgg
atcgagactccaaccaaccccatgatgaaggtggttgacatcaaggcctgctctgacttg
gtgcacgagcacagcaaagagattgtagtggttgttgacaataccttcatgtcttcttat
ttccagcgccccttggctttaggagctgatatctgtatgtactcagccaccaaatacatg
aatggtcacagtgacgtagtgatgggtctggtgtctttaaacaacgatgatctgaatgag
cgactgaggtttctgcaaaacgccatcggtggcgtgccgtctccctttgactgctacctg
tgtaaccgagggctgaagacgctacacctgcgcatggagcagcactttaaaaacgccatg
gctgctgccaggtttctggaggcagacgccagggtggaacgggtaattttcccaggcctg
tcctcccacccacagtacgagatgatgaagaaacaatgcaccgggtgtccagggatgatc
accttctatatcaaagggaaacttgagcacgccaccaccttcctcagcaaccttaaaatg
tttgcagtcgcagagagccttggtggttatgaaagcttagcagaacatccggcgatcatg
acccatgcgtcagtgccagcgaacgagagggccattcttgggatcagtgacacactgatc
cgtctctcagtgggactggaagacacagctgacatcatcaaagaccttgaccaggcactg
aacgctgctttatcagagactgcctggaatcccgcctctgctcataaagacaaggtgaat
gattttgtagattag
DBGET
integrated database retrieval system
