Xiphophorus couchianus (Monterrey platyfish): 114151049
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Entry
114151049 CDS
T05908
Symbol
sntb2
Name
(RefSeq) beta-2-syntrophin
KO
K24064
beta-syntrophin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114151049 (sntb2)
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Gene cluster
GFIT
Motif
Pfam:
PH_17
PDZ
PH
PDZ_6
PDZ_2
Tricorn_PDZ
Motif
Other DBs
NCBI-GeneID:
114151049
NCBI-ProteinID:
XP_027883745
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Position
2:23997949..24026139
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AA seq
593 aa
AA seq
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MAVWTRADKNGQLDLLLRDRWIRVAAELTRETLTLTAEAEASGQGGNHWDYPPAGLRNGM
SNGNDPGSSPGNPGRGSSSGQDQLQNQNHVVRGRSSSPGRGSVSRSQYDGNYGVNSSGKY
PVNGANSDFGSPGSGYGSPGSSFGSRQGDPPVNLDGSSEAVRKVRVVKQESGGLGISIKG
GRENRMPILISKIFPGLAADQSRALRVGDAILSVNGNDLREATHDMAVQALKKAGKEVTL
EVKYIREVSPLFKKPSLVADLQWDGVRPQSPSYSGSDDSGSPKHSSSLSSSKDRKVISLK
MCFISRNLTMPDLENRLLELHSPDGQHTMVLRCKDGATANSWFTAIHTNIAALLPQTLAH
INAYLGASSAATTHPHLKHIGWLAEQIQLEGGRQQFRPVVMALTEKDILLFDSVPWSRES
WSMPLLTHPLLATRLVHSGSARGSPSHGSDLVFATRTGTGRGIESHVFRVETHWDLSTWT
RALVQGVHAAAELIKEVSIGCTLNRQDVRLTLHYEKGFTITREPADQTGGAVLFRYPYEK
LKMSADDGIRNLYLDFGGPEGEMVFDLHSGPKPVVFVLHSFLSAKLTRMGLLT
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcagtctggaccagagcggacaaaaacggccagctggaccttctgctccgcgaccgc
tggatccgagtggcggccgaactcacgcgggaaacgctgactttaactgccgaggcggag
gcgagcggacaggggggaaatcactgggactacccgccggctggcctccgaaatggcatg
tcgaacggaaacgaccctggatcgagccccgggaaccctggtcgcggttcctcctcgggt
caagaccaacttcagaatcagaatcacgtggttcggggacgcagtagcagcccgggtcga
ggaagcgtcagccggagtcagtacgatggaaactacggtgtgaacagttctggaaagtac
ccggtgaacggcgcaaactctgacttcgggagccccggctccggctacgggagtcctggg
tcaagcttcgggtcgaggcaaggcgaccccccggtcaacttagacggctcctccgaagcg
gtgcggaaagtccgagttgtcaaacaagagtccggcgggctggggatcagcatcaaggga
gggcgggagaaccggatgcccatcctcatctccaagatcttcccggggctcgccgctgac
cagagccgtgcgctccgggtgggcgacgcgatcctatccgtgaatgggaacgacctccgg
gaggcgacccacgacatggcggtccaggcgctgaagaaggccgggaaagaagtcacgcta
gaggtgaagtacatccgcgaggtgtctccgctcttcaagaagccgtccctggtggccgac
ttgcagtgggacggcgttcgcccacagtcccccagctacagcggcagcgacgactctggg
tcacccaagcacagcagctcattgtcctcgtccaaagacaggaaggtcatcagcctgaag
atgtgcttcatcagcagaaacctcaccatgcctgatctggagaacaggctgctggagctg
cactccccagacggccagcacaccatggtgctgcgctgtaaagacggagccacagccaac
tcctggttcactgccatacacaccaacatagccgctctcctgccgcagacgctggcacac
atcaacgcctacctgggggcctcgtctgcagccaccacacacccccaccttaaacacatt
ggctggctggctgaacagattcagctggaaggcggacggcagcagttcaggccggtcgtc
atggcgctgacggaaaaagacatcctgctgtttgactcggtgccgtggagcagagagtcc
tggtccatgcctctgctcacacacccgctgctcgccaccagactggttcactccggcagt
gccaggggttctccgtctcacggctcagacctggtgttcgccactcggaccggcaccggg
cgcggcatcgagtcgcacgttttcagagtggagactcactgggacctgtccacgtggacg
cgcgctctcgttcagggggtgcatgccgcagccgagctcatcaaggaggtctccatcggt
tgcacgttgaatagacaggacgtccggctcacgctgcactacgaaaagggctttactatt
accagggagccagctgaccaaacagggggcgctgttctcttcaggtacccctacgaaaag
ctcaaaatgtccgccgacgatggaatacgcaatctttaccttgactttggtggtccagag
ggagaaatggtgttcgacctccactcgggtccaaagccggtggtcttcgtcctccactcc
ttcctgtcagccaagctcacccgcatgggccttctgacgtga
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