Xiphophorus couchianus (Monterrey platyfish): 114151075
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Entry
114151075 CDS
T05908
Symbol
ncbp2
Name
(RefSeq) nuclear cap-binding protein subunit 2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
xco03015
mRNA surveillance pathway
xco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114151075 (ncbp2)
09122 Translation
03013 Nucleocytoplasmic transport
114151075 (ncbp2)
03015 mRNA surveillance pathway
114151075 (ncbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114151075 (ncbp2)
03041 Spliceosome [BR:
xco03041
]
114151075 (ncbp2)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
114151075 (ncbp2)
Spliceosome [BR:
xco03041
]
Common components
Common spliceosomal components
Cap binding complex
114151075 (ncbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_10
Motif
Other DBs
NCBI-GeneID:
114151075
NCBI-ProteinID:
XP_027883786
LinkDB
All DBs
Position
9:31555292..31557430
Genome browser
AA seq
164 aa
AA seq
DB search
MSAKLNALTSDSYIEVSQYRDQHFKGNRYEQEKLLKQSNTLYVGNLSFYTTEEQVHELFS
KCGDVKRIIIGLDKIKKTACGFCFVEYYTRGDAENAMRFVNGTRLDDRIIRTDWDAGFKE
GRQYGRGKSGGQVRDEYRQDYDPARGGYGKLAQQHRSTERPNSF
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgaagctaaacgctttgactagcgattcatacatcgaggtcagtcagtacaga
gaccagcactttaaggggaatcgctatgaacaggagaagttgctgaagcagagcaatact
ctatatgtggggaatctctccttctacaccaccgaggagcaggtgcatgaactgttttct
aaatgtggcgacgtgaagcgcatcatcataggtctggataagatcaagaagacggcttgt
ggattctgttttgtagaatattacacacggggagacgcggagaacgccatgcgcttcgtt
aacggcacacgactggacgatcgcatcatcaggacggactgggacgccggcttcaaggag
ggcaggcagtacggccgcgggaaatctggaggacaagtgagggatgagtacaggcaggac
tacgacccggccagaggcggctacggtaagctagctcagcagcatcggagcacagagaga
ccgaactctttttag
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