Xiphophorus couchianus (Monterrey platyfish): 114151096
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Entry
114151096 CDS
T05908
Name
(RefSeq) neurogenic locus notch homolog protein 2-like
KO
K20994
Notch 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
114151096
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
EGF_3
NOD
NODP
Ank_3
EGF_Teneurin
Ank_5
Ank_4
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
114151096
NCBI-ProteinID:
XP_027883812
LinkDB
All DBs
Position
9:16015645..16067604
Genome browser
AA seq
2493 aa
AA seq
DB search
MEHIPGFCLGKALVLVFYFTRLTLGLQCVDEKAPCINNATCLTFNNGTEYCRCAPGYLGE
YCQHKDPCQPGYCLNGGNCSVSMSAGVPVPGSASCTCPLGYTGQRCQTPQNSTCYPNNPC
ANKGVCTLLSLVKYKCECTRGWTGPRCEHEDSCLSSPCGNGGRCSSLPGGSYTCSCLTGY
HGPRCLNDTNECADTPSPCQNEGECVNTPGSYKCVCKPGFTGLHCESSYIPCSPSPCLNG
GTCHQTSETTYSCHCLPGFNGTNCENNIDDCPGHQCANGGTCIDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLIGGYVCVCVNGWSGPDCSENIDDCATAACSQGSTC
IDRVASFICVCPPGKTGLLCHRDDACISNPCREGSHCDTNPITGMFNCNCPPGYIGNTCN
RDRDECSIGPNPCEHGGQCVNTDGSFTCNCVKGYSGPRCEQDVNECASNPCLNDGTCLDR
IGEYTCICMPGFEGSHCEIDVNECLSSPCLNQGKCVDQVSRFICQCPAGFSGDMCQIDID
ECSSTPCLNGAKCIDRPNQYDCECAEGFAGLLCEENINDCHPPPCHHGVCKDGIATFSCE
CNPGYTGFICNIQVQECLSNPCQNRGRCIDLVDAYQCNCPSGTSGVNCEINENDCASNPC
KHGECQDGINEYKCVCSPGYTGDQCDVNINECNSNPCMSGGTCVDIVNGFQCLCPPGTYG
PLCLSGTDHCASQPCVQGDCIEQQHGYRCECKPGWIGQHCEQQKNECLPNPCLNGAICQN
LLNGYTCHCKPGFRGVNCEKNIDECASGPCLNHGFCRDGINSYTCQCNPPFTGKHCEVEQ
VPCASHPCERGGVCLPSQDYTSFTCRCRSGWKGKLCNEDVNECMKNPCLNGGRCTNTAGS
YVCQCQLGYSGHNCQINVDDCSPNPCLNGGHCVDKVASFSCDCRAGFEGDRCETDVNECA
SEPCRNGGVCRDYVNSFVCRCLPGFNGIQCEHNILECTESSCLNNGTCIDDINTFSCRCR
HGFYGTFCEFEHNECDSQPCKNGGTCTDGLGTYRCTCPVGYSGQNCQNYVNLCNQVKCKN
GGTCSQTATSWTCRCQMGWTGLYCDVPNMSCQDYAARSGLVVEHVCKNAGHCVNVGNSHQ
CKCQSGYTGSYCEEMVDECQSNPCRNGATCKDYQGTYECVCKSGFQGVNCEYDVDECHSK
PCLNGGRCINLINRFTCICPSGTHGVQCEVNKDDCAPSPGSSEPRCRNGGQCVDGVGRYT
CSCPPGFVGEHCEGDVNECQSGPCSAAGSLDCIELVNDYQCLCRLGYTGRHCESMVDLCV
SQPCRNGGVCTMNMSSVHGYTCTCPPGFSGFSCGEIEDFNCARLSCQNGGRCMKSPVGQL
YCQCQPGFSGSHCEKEQMCSVLCQNGGVCVKDPSNPFQHSCRCPDNFFGRFCENKVPGPL
RCPYIQCEVRLGDNVCDEQCNNHECQWDGGDCSLSWPQPWFNCTASVPCWDLFKNGQCDK
ECDNLGCLFDSFECMEVHTSPCKYDMYCKDHFGNGICDNSCYTEACGWDGLDCSNNVPAD
LAEGKLVIVVLLQPKELLGDLRGFLRSLGALLHTNVRVMLDENEEPMVYPYYGEQRQTDQ
SRRKRELAREVIGSVVHLNIDNRECSKSSTSNCFSNTSIAASFIAAAHIKADLPYPLVSV
KSAPIIKPPPPYLYLIGVAALIVLLILVLGMLAAKKKHKHGVLWLPDGFLATKNDKRREP
VGQDDFDMKNFKTHDGSMVDGGQSQRWLDDETPSKKPRTEDKPLLSIPMDGGIDRREWTL
QHHKAADITLTPPQADLDADCLDVNVKGPDGFTPLMVASLRNGGGPDCSLHGDEEEESGG
DEPGPSVISDLIAQGANLMAQTDRTGETALHLAARYARADAAKRLLDAGADPNAHDNMGR
TPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLVLAARLAVEGMVEELIHCHADIN
AVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFEAAQVLLD
HYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMGGGGNSVMCGANG
GGFIGMRPGPQGKKSRSRGAGAKAGGVGGGPKELKDMKVKRRKKPAGGEGPGLAAAGGGG
GGGAGGGSTNGVKAAGGLPSESSVTMSPVDSLESPHSYAGDVSAAGSNTANSPPLLSSPT
SRAMLPPVSHMLGQQQGWGGVAKHGYNGHMFGLLPHTMRGAHPGMSHGQGAMMTPMNVTM
IREPLPPIVTFQMVPTGTGQAMLKQPQSGQVQVNQSQGQNQSLCHTQPVPGHVRCSPGMI
YPDQMNVVVPSQNLQHPHNIRHSNGIEGQSRPLPPYTPMQSPVDKYPTPPSQHSHVPAGS
EGTTPGRSTHPQNEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPTPLGNSHHALPSSR
HTHIPEQAQMQPPSQQMQPPAQQPQLGNMQVFA
NT seq
7482 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatacccggtttctgccttggcaaggccctagtcttggtcttctacttcact
cggctaactcttggtctgcagtgtgtggatgaaaaggcgccttgtattaacaacgcaaca
tgcctgacctttaacaatggcacagaatactgcaggtgtgctccaggttatttgggagag
tactgtcagcacaaggacccttgtcaaccaggatactgcctgaatggggggaactgttct
gtgtccatgtcagctggggttcctgttcccggtagcgcctcctgcacctgccctcttggc
tacaccggacagcgctgccaaactccccaaaactccacgtgttatccaaacaacccatgc
gccaacaagggggtctgtaccctgctgtcccttgtcaagtacaagtgtgagtgcaccaga
ggatggacaggtccacgctgtgagcatgaggacagctgtctctccagtccctgtggcaat
ggaggaaggtgcagctctctgcctggtggcagctacacctgttcatgtctcaccggctac
catggtccgcgctgccttaatgacacaaatgaatgtgcagacacaccctctccctgccag
aatgaaggcgagtgtgtcaacacccctggctcttacaagtgtgtctgtaagccaggcttc
acgggtcttcactgtgagagttcatacatcccctgctcaccttcgccatgtctaaacgga
ggcacctgccaccagacctctgaaacaacctactcatgccactgccttccaggttttaat
ggaactaactgtgagaacaacattgacgactgtcctggccatcagtgtgccaatggagga
acatgcatagatggagtcaatacctacaactgtcagtgtcctccagagtggactggtcag
cattgcacagaggatgtggacgagtgtcggctgcagccaaatacttgccagaatggcggt
acatgtagcaacttgatcggtggctacgtctgcgtgtgcgtcaacggctggagcggcccc
gactgctctgagaacatcgatgactgcgcgacagccgcatgcagccagggctccacttgt
atcgaccgtgttgcgtcttttatctgtgtctgtcccccaggaaagacaggtttgctctgc
catagagacgatgcctgcatcagtaacccctgcagagagggctcacattgcgacaccaac
cccatcactgggatgtttaactgtaactgtccaccgggatatataggcaatacctgcaac
agagacagagatgaatgcagcattggtcctaacccatgtgagcatggcggtcagtgtgtg
aacactgatggctccttcacttgtaactgtgtcaaaggttactcagggcctcggtgtgaa
caagatgtcaatgaatgtgcctccaacccctgcctgaatgatggcacatgtctggatcgc
atcggggaatacacctgtatctgcatgcccggatttgaggggagtcattgtgagattgac
gtgaatgagtgtttgagctctccctgtctgaaccagggtaaatgtgtggaccaggtcagc
cgtttcatttgccaatgcccagcaggtttcagcggagatatgtgccaaatagacatagat
gagtgctccagtacgccttgtttaaatggagccaagtgtatcgatcgacccaatcaatat
gattgtgaatgtgcagaaggcttcgctggtctgctttgtgaggagaacatcaatgactgc
catccaccaccttgtcatcacggtgtgtgtaaggatggcattgccaccttctcttgtgag
tgcaaccctggctacaccggcttcatctgcaacatccaggtccaggagtgcctcagcaac
ccgtgccaaaatcgagggcgctgcattgacttggttgatgcgtaccagtgtaactgtcca
tcaggaacctcaggtgtgaactgtgagatcaatgagaacgactgtgccagcaacccttgt
aagcacggagagtgccaagatggcatcaatgagtacaaatgtgtgtgttcccctggatac
acaggagatcagtgtgatgtcaacatcaatgagtgtaactcaaacccatgcatgagtggg
ggaacctgtgtggacatagtgaatgggttccagtgcctgtgcccacccggcacctacggc
ccgctgtgcctttcaggaactgatcactgtgcttcccagccttgtgtacaaggagattgc
atcgagcagcaacacgggtaccgatgtgagtgtaagcccggttggatcgggcaacactgt
gaacagcagaagaacgagtgtctgccgaatccatgcttaaatggggccatctgccagaat
ctgctcaatggctacacctgtcattgcaaaccaggattcagaggggtcaactgtgagaag
aacatagatgagtgtgcatcagggccgtgtctgaaccacggcttttgtagagatggaatc
aacagttacacgtgtcagtgtaatcctccattcacaggaaaacactgtgaggtggagcag
gttccctgtgcctctcatccatgtgagaggggaggggtttgcctcccgtctcaagattac
acctcttttacctgccgatgtcgctctggctggaaaggaaaactctgcaatgaagacgtg
aacgaatgcatgaagaacccctgcctgaacggtggccgctgcactaacaccgcaggaagc
tacgtgtgtcaatgtcaacttggatatagtggacacaactgtcagataaatgtagatgac
tgctcaccaaacccctgcctgaatggaggccattgtgtggacaaagtggcgagtttctcc
tgtgattgccgcgcgggttttgaaggtgatcgctgtgagactgatgtgaatgaatgcgcc
agcgagccctgcaggaatggaggcgtctgccgtgactacgtgaacagcttcgtgtgcagg
tgcctgccgggcttcaatggaatccagtgtgaacacaacattcttgaatgcacagagagt
tcctgcctcaataacggaacttgcattgatgacattaataccttttcctgccgttgccgg
catggtttttacggaacgttctgcgagtttgagcacaacgaatgtgattctcagccctgt
aaaaacggaggcacttgcacagacggcctggggacttaccgctgcacctgtcctgtggga
tacagtggacagaactgtcagaactatgtaaacttgtgcaaccaggtgaaatgtaagaac
ggtggcacctgctctcagacagctacatcctggacctgccgctgtcagatggggtggaca
ggactttactgtgatgtccccaacatgtcctgtcaggactatgctgccaggagcggtttg
gtagtggagcatgtatgtaagaatgcgggtcactgtgttaatgtggggaactcccatcag
tgcaagtgccagtcaggatacactggcagctactgtgaggagatggtggacgagtgccag
tcgaatccctgtagaaatggcgctacatgcaaggattatcagggcacatacgaatgtgta
tgtaaatcaggcttccaaggagtgaactgtgagtatgacgttgacgaatgtcactctaag
ccctgcctcaacggaggaagatgtatcaacctaatcaaccgctttacatgcatctgccca
tcaggaacacatggagtccaatgtgaggtgaacaaggatgactgcgcccccagtccaggc
tcctctgagccgcgctgcagaaacggaggacagtgtgttgacggcgtgggccgttacacc
tgctcctgtcctccagggttcgttggggaacactgcgaaggcgacgtcaatgaatgccag
tctggaccctgcagtgctgctggcagcctcgactgcatcgagctggtcaatgattatcag
tgtctctgtcgccttggatacacaggtcgccattgtgaatcgatggtggatctgtgtgtg
tcgcagccgtgccgtaatggcggcgtttgcaccatgaacatgagctcagtacacggctac
acctgcacatgtccccctggcttttctggattcagctgtggtgaaatagaggatttcaac
tgtgcaagattgagctgccaaaacggcggccgctgcatgaagtcaccagtaggacaactg
tattgccagtgccagccgggtttcagcgggtcacactgtgagaaggagcagatgtgctca
gtgctctgccagaacggaggagtctgtgtcaaagacccgtccaacccgtttcagcacagc
tgccggtgtcccgacaacttcttcggacgattctgtgagaacaaagtgcctgggcctctg
agatgcccttacatacagtgtgaggtacgactaggggataacgtgtgtgacgagcaatgc
aacaaccatgaatgccagtgggatggaggcgattgctcgctcagctggccgcagccgtgg
ttcaactgcacagccagtgttccctgctgggatctctttaagaacggacagtgtgacaag
gagtgtgacaaccttggttgtctctttgacagctttgaatgcatggaggtccacacaagc
ccatgcaagtatgacatgtactgcaaagaccactttggaaatggtatctgtgacaatagc
tgctacacagaggcctgtggatgggacggactggactgctctaacaacgtaccggctgat
ttggcggaaggcaagctggttattgtggtcctactgcagccaaaggagctgctgggagat
ctgaggggttttctgcgctccctgggagccctgctccacaccaacgtgcgggtgatgctg
gacgagaacgaggagccaatggtgtacccttactatggagagcagagacagactgaccaa
agcagaaggaagcgggagctggccagagaggttattggctctgtggtgcacctgaacatc
gataaccgtgaatgctccaagagctccacctccaactgcttctccaacacttctatagcc
gcctcctttattgcagcggctcacatcaaggccgacctgccttacccactagtgtctgtt
aagagtgctccaataataaagccccccccaccatatctgtacctgattggagttgctgct
ctcatcgttctgctgattctggtgctggggatgctggcagccaagaagaaacataaacat
ggagttctgtggctccccgatggcttcctcgccactaaaaatgacaagaggagagagcct
gttggacaggacgactttgacatgaagaatttcaagacccatgatggaagcatggttgat
ggaggtcagagtcagagatggctcgatgatgaaactccatccaaaaagccaagaactgaa
gacaagcctctgctttccatcccaatggatggaggtatcgaccgtagagaatggaccctg
cagcatcacaaagctgcagacatcactctcactcctccccaggctgacttagatgctgac
tgtctggacgttaatgtcaagggacctgatggcttcaccccgctgatggtggcgtccctg
cgtaacggtggaggtccggactgcagcctgcatggagacgaggaagaagagagcggagga
gacgaaccgggaccgagtgtcatttcggatctgatcgctcagggcgcgaatctgatggct
cagactgaccgcacaggcgaaaccgctctccacctggctgcccgctacgctcgggccgac
gctgccaagagactgctggacgccggagcggatcccaacgctcatgacaacatgggcaga
acgccgcttcacgccgccgtggcagccgacgcacaaggagtctttcagattctgatccgt
aaccgcgctacagaactggacgccaggatgaacgacggtacgacgccactggtcctggca
gcacggctcgctgtggagggcatggtagaagagctgatccactgccacgccgacatcaat
gctgtagatgaccacggtaaatctgctttacactgggcagctgcagttaacaatgtggag
gctactcttgtgcttctgaagaatggagccaaccgcgacatgcaagacaataaggaggag
acccccttgttcctcgcagcacgagaaggcagctttgaggcggctcaagttcttctcgat
cactactccaaccgcgacatcaccgatcacctggaccggctgccccgcgacacagctcaa
gagcgcatgcaccatgacatagtccgcctgctggaccagtacaacctggttcacagccca
cacaacggtcccaaccacatgggtggaggtggaaactctgtgatgtgtggggcgaacggt
ggaggcttcatcggcatgcggcccggaccccaaggtaagaagagcagaagcagaggagct
ggggcgaaggccgggggagtcggcggggggccaaaggagcttaaagacatgaaagtaaag
agaaggaagaaacctgctggaggagagggtccgggtctggctgcggcaggtggaggaggc
ggaggaggtgcaggtggaggcagcactaacggtgtaaaggcagcaggaggacttccttcg
gagagctcagtcaccatgtctcctgtcgactccctggagtcgcctcactcctacgcaggc
gacgtttctgccgcaggctccaacaccgccaactctcctcccctcctgagcagtcccacc
tccagagcaatgctgcccccggtcagccacatgctggggcagcagcagggctggggggga
gtggccaagcacggctacaacggtcacatgttcggtctcctcccgcacaccatgagagga
gctcaccccggcatgagccacggccagggcgccatgatgacccccatgaacgtcaccatg
atcagggagccgctgccccccatcgtcacctttcagatggttcccacgggaacgggccag
gccatgctgaagcagccccaatcagggcaggtacaagtcaaccagagccagggccagaac
cagagtctgtgtcacacccagccggtaccgggacacgtccgctgcagcccggggatgatc
tacccggaccagatgaacgtggtggtgccctcccaaaacctgcagcatccccacaacatc
agacactccaacgggatagagggccagtctcgaccgctgccaccttacacgcccatgcaa
agcccggtggataaataccctacccctccctcccagcacagccatgtccccgctgggtca
gagggcaccaccccgggccgctccacccacccgcagaacgagcacccatacctcaccccc
tcccccgaatccccggacccctggtcctcctcctctccacactctaactcggactggtcc
gacgtcaccaccagccccaccccgctggggaactcccaccacgcactgccatcgtcacgc
cacacacacattccagagcaggcgcagatgcagccgccgtcgcagcagatgcagccgcct
gcgcagcaacctcagctcggaaacatgcaggtgttcgcatga
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integrated database retrieval system
