Xiphophorus couchianus (Monterrey platyfish): 114151102
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Entry
114151102 CDS
T05908
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114151102
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
xco03310
]
114151102
Transcription factors [BR:
xco03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
114151102
Nuclear receptors [BR:
xco03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
114151102
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
114151102
NCBI-ProteinID:
XP_027883818
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Position
9:complement(15574780..15593206)
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AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGVGSREDNGDLAE
HGRTYRRGSSATLSDLDDITTLPEGLLFDLPLTPEDAGGDYCSLEMLGGSAGSSSSSQSS
PEQTSLDFIDSNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLLEIEHIIQSVVKSHVETS
QYNTEELKRMAWNIYNPEETRSYQTKSAEVMWQQCTVHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFASAQLFKALGCDDLVNAVFDLAK
TMSRIQMSDDEMALFSAAVLLSPDRPWLTDVQKIHKLQEKVYVGLQRCLQKEGASEEKLA
KMVSKLPMMRSICNLHIDKLEFFHLVHPETAYAFPPLYREVFGSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtcattccctgtaaaatctgtggggataaatcatcaggaatc
cactatggtgttatcacctgtgaaggctgcaagggtttctttcgacgcagccagcaaaac
aatgctatgtactcctgctcaagacaaaggaactgcctgattgaccggaccaaccgaaac
cgttgtcaacactgcaggctgcagaagtgtctcgctcttggcatgagccgtgacgcagtg
aaatttggtcgcatgtccaaaaagcagcgtgacagcctgtacgcagaggtccagaagcac
cagcagtcacaggagtgcgctggagtcggctcccgcgaggacaatggagacctagcagag
cacggccgcacctacaggagaggctccagcgccacgctcagcgacctggacgacatcaca
accttgccggagggcctgctttttgacctacccctcaccccagaggatgcaggtggagat
tactgcagcctggaaatgctgggaggaagtgcagggagcagctcgtcctctcagagctct
ccagagcagaccagcttggactttattgacagcaaccacagcatcaaacacgagtaccag
ctgttgcatgattctggactcttctctcatgccatcctcaaccctctgccagagggctgc
tcccttttggaaatagagcatataatccagagtgtagtgaagtcccatgttgagacaagc
cagtacaacacagaggagctgaagaggatggcatggaacatctataatccagaagagact
cgttcataccagaccaaatcagctgaagtgatgtggcagcagtgcacggttcacatcacc
aacgcaattcagtatgtggtggagtttgccaaacgcatctctggcttcatggacctctgt
caaaatgatcagattattctacttaaagcagggtgcatggatgtccttctgatccgtatg
tgccgagcctacaaccccatcaataatacactgctttttgatggaaagtttgcaagtgct
cagctttttaaagctcttggctgtgatgaccttgtgaatgctgtgtttgacttagcaaaa
actatgagtcgtatacagatgtcagatgacgagatggctctgttcagtgctgcggtcctt
ctgtctccagaccgaccttggctgacagatgtccagaagatccataaactgcaggagaag
gtttatgtgggtctgcagcgctgtctgcaaaaagagggtgcatcagaggagaagctagca
aagatggtgtctaagcttcccatgatgaggtccatttgtaacctccacatagataagctg
gagtttttccatctagttcaccctgagacggcatatgccttccctcctttgtacagggaa
gtttttgggagcgaaattaccttcccggactctaccgagggctag
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