Xiphophorus couchianus (Monterrey platyfish): 114151149
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Entry
114151149 CDS
T05908
Symbol
syde2
Name
(RefSeq) rho GTPase-activating protein SYDE2 isoform X1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114151149 (syde2)
Membrane trafficking [BR:
xco04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
114151149 (syde2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
114151149
NCBI-ProteinID:
XP_027883964
LinkDB
All DBs
Position
9:30819570..30865735
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AA seq
1690 aa
AA seq
DB search
MADPLRRTLLAKLRGKKSKKGATLSGGYGSAAAANGGREGKEKVFPEEPRPVVLLTGLDF
TAERMSAYENYVAGALVQTEGATTVPESRAAEVAGSRPREPSSGGRVHVNEWLLGAPLQR
DAQFAGDTLGGEDRRLREPRSAGISLEGPHVQINRFVPAPRQCGFGDSIGFGDSSGQALH
RAQVRAQTGVVRAAVAWVADGEGAETRSRGYSRHMAGTVVAIHTNNTWNFDRPALEAYTQ
TSVHPNSEENVLIRSIESYEPDCVRPIGETAGCPQSPTVFPTDLQICDLKMQTLCTTEAS
LRYPLDSEDDDYYDNEILPFYEAVKPKTVARVEVAEIQDKGQGDDGDSAQETDRLRTQLQ
EAYYLLINAMNDISLDVQQISGGLAEQQATSSCSSHSRDSLCSRLSVKNTDSDSWSSGGN
HSSQQLSDTESLLLCLTRSLESKTKLISKSTSSLSVTKKPTLVRSASDGVIRYQGLPSSC
TQATKRESALVHHDKEALELNKHEEAEVSRAGELSEPEVLCNTISSDELLQNVGVEEEHG
GRLNESSGSVNSLTGSTDSNSEAASHQGQEGKQEQAEVRTQVAQSVSKAYGVTVNKMQEW
MHKGRLLSSEMKQRIEGSSLPLGGCQSQDWSSTQANLGGCKPGVPVRGSKSVKVKSSTVK
SARQQQQPAFIENFQTPCANGREASRLTNEPSSWSPQLTTTITVSKKRNWLQQSSQPKSH
CTKDELQGMLGAEEGSQLPPAPSPSPEFVRSTGGAPPRPVRPQIPQVVVGQCKMSPHPRS
VDPSEENDADDEGEIWYNPIPEDDEPVTSRRPCIRLVVPPQGEAQRRPGRGADVAQGSWT
VEGSSGSEAVMEGPGSGSGDLSSGNAAHSTEALHLHRQMLACKPPEEGGPSSSRPTDGLD
LPNVVSFSPPSSPNPTKKSSSINWSFPDKIKSPRTVRKISMKMKKLPELSRKLSVKGTQN
SNTSSNGNSQLEPRAHSLRATGSGSETVTQSSGPPRLAPSGGGPASRNVISRYHLDSSVS
TQHSFNKKKNNGSSKSASKGGYLSDGDSPELVAKSGKHGSAEGKSGKGKDAEGGSSRLNG
TELDIDAFRHYSFTDQPKCSQYISGLMSLHFYGAEDLKPPRIDSRDVYCAIQVDSVNKAR
TALLTCRTSFLDMDHTFNIELENAQHLKLVVFSWEPTPKRNRVCCHGTVVLPALFRVTRT
HQLAVKLEPRGLIYVKLNLMEQWQNSLDGGPDGDREPQVFGVEAWRVVERESTGLMVPLI
IYKCINEIERRGCQVVGLYRLCGSAAVKKELREAFERNSQGAELCESMFPDINVITGVLK
DYLRELPYPLITKQLYEAVLETMATRPLKMAAAGCENDPADSEYTVSLLEILPEVERMTL
RKLLDHLKRVASYQEMNKMTCQNLAVCFGPVLLSQRQEASCHTNRVFIDSEELASALHFK
KHIEVLHYLLQLWPVVDPNDQSSLRFPAASEAPAAFDLLSAPPLRRRKERPQFLNLSEAE
MAGVLRPKPGRLDSPSNRYAGDWSGCGESYFPSELLLPPSKEEADYDDVPSEDTEAVEEA
HEKDAAEEDDQERDTSPTSDPHVEEDPQREEFVKKEENGEEEEEEKESESDSSNNTPAFE
EEEEAEEKVFNHILPARLPKEHAYQAYMKIQDISPVLSNRVNLRDLQESIDTLIGNLERE
LNKNKLNVGY
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcctctgcggaggactttactagcaaaactacgggggaagaagtccaaaaaa
ggagcgacgctcagcggtggatacggatctgctgctgcggcgaatgggggccgagaaggt
aaagaaaaagttttccccgaggagcctcggccggtagttttgctcacagggctggatttc
acggcagagagaatgagcgcatacgagaattatgtagcaggagcgctggtgcaaacagag
ggggccacaacagtcccagagagtcgcgcagcggaggtggctggctcacgtccccgggag
ccgagcagcgggggtagggttcacgttaatgaatggctcctaggggccccacttcaaaga
gacgcgcagtttgctggggacacgttaggaggagaggacaggaggctcagggagcccaga
tctgccgggatctctctcgaaggaccacatgtgcagataaatcgcttcgttcctgcgccg
aggcagtgcggcttcggcgattcgatcgggttcggggacagctccggtcaagcgttacac
cgagcgcaggtgcgggcgcagacgggggtcgttagagctgccgtggcttgggttgctgat
ggtgagggggcagagaccaggagccgggggtactcccggcacatggcagggactgtagta
gcaattcacacaaacaacacctggaactttgaccgccccgctctggaggcatacactcaa
acttccgtgcatccaaactctgaggaaaatgttttaatcagaagcattgaaagttatgag
cctgactgtgtcaggcccatcggggagaccgctggatgccctcagagcccaacagttttc
cccactgacttacagatttgtgatctcaaaatgcaaactctgtgcaccacagaggcatca
ctgaggtaccccttagatagtgaagatgacgattactatgacaatgaaattctgcccttt
tacgaagcagttaaaccaaaaactgttgctagagtggaggttgcagagatacaggataaa
gggcagggagatgatggtgatagcgcccaggaaacagacaggctcagaacacagctgcaa
gaggcctattatcttctcatcaacgctatgaatgatatcagcttggatgttcagcagatt
agtggtggcttagctgagcagcaagccacctcttcctgtagtagtcattcaagagacagc
ctgtgctccaggctctctgtcaaaaacactgacagtgactcctggtcctctggagggaac
cacagttcccagcagctttctgatactgaatcactcctgctctgccttactagaagcctg
gagtcaaagacaaagctgatcagtaaaagcacatccagcttgtcagtgaccaaaaaaccc
acattagtccggtctgccagtgatggagttattaggtatcaaggtctaccttcatcttgt
actcaggcaaccaaacgggaaagtgcattagtccatcatgataaagaagctttggagtta
aataaacatgaagaggctgaagtctcaagagcaggtgagctatctgaaccggaggtgctt
tgcaacaccatcagcagtgacgaactgctgcaaaatgtcggagttgaggaggaacatggc
ggacggctgaatgagagcagcggttcggtcaacagcctcacaggttctacagacagcaac
agcgaagcagcaagtcatcagggtcaggagggcaagcaagaacaggccgaagtccggaca
caggtggcccagtcggtcagcaaagcctacggtgttactgtgaacaagatgcaagagtgg
atgcacaagggtcgtctgctgtcgtctgagatgaagcagcgcattgagggttcgtcttta
cctcttggtggatgccagagccaggattggtcctccactcaggctaacctcggaggctgc
aaaccaggggtcccggttcgagggagtaaatcagtcaaggttaagtcgtctacagtcaag
tctgcaagacagcagcagcagccagctttcattgagaatttccaaactccatgtgctaat
ggcagagaggccagcagactgaccaacgagccttcatcatggagcccgcagctcaccacc
accattacagtgtccaaaaagcgcaactggctgcagcagagctcccagccaaagagtcac
tgcaccaaggatgagctgcaaggcatgctgggagctgaggagggcagtcagcttcctcct
gctcccagcccctcgccagaatttgtgagatccacaggtggagcgccgccacggccagta
cgcccacagatccctcaggtggttgttggtcagtgtaagatgtctcctcatcctcggagc
gtggacccatcggaagagaacgacgcagatgatgagggggagatttggtacaacccaatc
ccagaggacgatgaaccagtgacgtcccgtcggccctgcattcggctggtcgtcccaccg
cagggcgaagcgcagaggcgacctggcaggggagcagacgtggctcagggcagctggacc
gtggagggttccagcgggtctgaggcggtcatggaaggtcccggtagcggttctggagat
ttgagttcggggaatgctgcacattccacggaggcgctacatctgcacagacagatgctc
gcgtgcaaacctccagaggagggggggccctcctccagcagaccaacagatggacttgac
ctgcccaacgtcgttagcttctcacctccttcgagcccaaacccaaccaagaagagcagc
tccatcaactggtccttcccagacaagatcaagtccccacgaacagtcaggaagatttcc
atgaagatgaagaagcttcccgaactcagccgaaagctcagcgtcaaagggacccaaaat
agcaacacaagtagcaatggaaacagtcagctagagccaagggcccattctctccgggcc
accggcagtgggtccgaaaccgtcacccagagttccggtccgcctcggttagccccatcc
ggaggtgggccggcgagccgcaacgtgatctcccgctaccacctggacagcagcgtttca
acacaacacagcttcaacaagaagaagaataatggcagctcaaagtcggccagcaaaggc
ggctacctcagtgatggtgactcaccggagctggttgccaaatctggcaaacatggatct
gccgaggggaagagtggaaaaggcaaggatgctgagggaggaagttctagactcaatggc
accgagctggacattgatgcttttcgccattacagcttcacagatcagcccaagtgcagc
cagtacatctctggactgatgagcctccatttttatggtgctgaggacctcaaacctcca
cgcatcgactcacgagatgtttactgtgcaatccaggttgactctgttaacaaagcacga
accgcacttcttacctgtcgaacatcgttcttggatatggatcacaccttcaacattgag
ctggagaacgcccagcacctcaagctggtggtgttcagttgggaacccacgccaaaacgg
aaccgtgtctgctgccacggaacggtggtgctgcccgcactcttcagagtgacacgcacc
caccagctggcggtgaagctggagccgcgggggctgatctacgtcaagttgaacctcatg
gaacagtggcagaactcgctggacggcgggccagacggagacagagagccgcaggtgttt
ggagtggaggcgtggcgggtagtggagagggagagcaccgggctgatggtgccactcatc
atatacaagtgcatcaacgagattgagagaagaggctgccaagtggtgggtctctatcgc
ctgtgtggctccgcagccgtaaagaaggagctgcgtgaagcatttgagagaaacagccaa
ggcgcggagctgtgtgaaagcatgttccctgacatcaacgtcatcacaggagtactaaag
gactacttgcgtgaacttccctatcctctaatcaccaagcagctgtatgaggcggtgctg
gagaccatggccaccaggcccctcaagatggccgctgcggggtgcgagaacgatccggca
gactcggagtataccgtgagcctgctggaaatcctaccggaggtggagaggatgactttg
cggaagcttctagaccacttgaagcgcgtggcgtcctaccaggaaatgaacaagatgaca
tgtcagaacctggcagtgtgttttggcccagtgctgctcagccagcgtcaggaggcgtcg
tgccacaccaaccgcgtcttcatcgactcagaggagctcgccagcgccctgcacttcaaa
aagcacattgaagtcctgcactacctgctgcagctctggccagttgtggacccaaatgac
caatcgtctcttcggttccctgcagcctctgaggctccagccgccttcgaccttctgtca
gcccctcctctgagacgtaggaaagagcgcccccagtttttaaacctcagtgaagcagag
atggccggtgtcctgcggcccaaaccgggacgtctggacagtcctagcaacagatatgct
ggcgactggagcggctgtggtgaaagttacttcccctctgaactgctgcttcctcccagt
aaagaagaagcagactacgacgatgtgccatctgaagacacagaggcggtcgaggaagcc
cacgagaaggacgccgcagaggaagatgaccaggagagggacacaagtcctacgtctgat
ccccatgtggaggaagaccctcaaagagaggagtttgtgaaaaaggaagaaaatggagaa
gaagaggaggaggagaaagaaagtgagagcgacagttcaaacaacacgccggcttttgaa
gaggaggaggaggcggaggagaaagtgtttaaccacatcctcccagctcgacttcctaaa
gagcacgcttaccaggcatacatgaagatccaggacatcagtcctgttctgagtaacagg
gtgaacctgagagacctgcaggagagcattgacaccctaataggaaacctggaacgagag
ctaaacaagaacaagctcaacgtcggatactga
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integrated database retrieval system
