Xiphophorus couchianus (Monterrey platyfish): 114151196
Help
Entry
114151196 CDS
T05908
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114151196 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
114151196 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_LRWD1
PDZ
LRR_NXF1-5
LRR_5
LRR_EndoS
LRR_Zer-1
LRR_At5g56370
PDZ_2
Motif
Other DBs
NCBI-GeneID:
114151196
NCBI-ProteinID:
XP_027884045
LinkDB
All DBs
Position
9:31236699..31379256
Genome browser
AA seq
1695 aa
AA seq
DB search
MDNYSALPLQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFQCQALKKLSLPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLTQLERLDLGSNEFSEMPEVLEQMHSLKELWLDNNSLQSIPGSIG
KLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQ
LTSLPHTIGSPKPKQGLSLLEELDCSCNELESLPPTVGYLHSLRTFAADENFLTQLPREI
GNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDN
QSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQRMTVAF
DFEDKKDEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKSMHPGHGHQHQLSSG
TATSAGTNMEHAHLSKEQYEPPWPLPPKELMQVFDSFDGRNETVCQVTDREMQDFSQSQL
MDQGPMHNSGIDIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLG
KDKKESTDEEVDKLHCLNHSGSSATYSDYSPSQGSSGSSNPSANTHSHTHPHAHAHTPAL
PTPSKDQAPQTHWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWSEA
QHYDNTGFDAEESQMDPMSSHTSQGNPPLGSKPRSQSAHGRRPLLRQDRIVGVPLELDTQ
TLPYHGNQRSTPDNDPQSSGPSSQNPWQNWTRTPSPLEDRTAFPSKLDLTPTSSPNPDRK
DMDSRLEQGSGPLPGSWTYHNSQGEQIRKDQLIVSGGNKVTVVMSKSSDRLSPMMKETRS
KFKKSQSIDEIDIGSYKVYSIPMESYSSSIEQQTSLDRPELPGSMEQTSMSRSQSAPMLD
DELGFPGHGGGNQNQSGQNQKPAIPHKAYHFDQNYNPQVTIDRRIPPPFPNTPDYVNHSS
KAMDYLSQPGKTLPKELVSPRYRAYPPLEMFSFPQASINQDGPSSQQQQTISTQRSRPGF
LRRADSLVSSTELALFRRVHEAQQEALQEAQYKHQMDPPHYSRALAYSSPMEHSALTNMS
DNQNQMMHNKRNGRYDDDYTTYQEQKKPMIGYPTKSLTQRRPLSARSYSTETYGASQARP
VSARPTMAALLEKMPPDYTLATFPEKPSEDTIKVRPVVPQKPEDITSKMPADWRQQLLRH
IEAKRLDRSGVLKHNTLTLGMLYQGGGHGQGRSTTLNFNLYNNTRHEPPAGRWLPLPPPP
SAIITPSQQAAMLDNDQEGVTGSNQWAPYSLGRRDVPPENLMKKGGHSHNPSHQSHNTMI
VTSTSSSSATVPHRVVGQQVYDGMMNKGGQYQQGMSLSVVPAGGPGQYQGNVSQGLPSPG
QAYPSGGLPMALSSSGNQSQYNPHTSHQPATNPQYHVNQGMTHSNQAVMATHTNPRPQSA
RCLLQTKGQKSTDGFQEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQHDG
PAASSLKPGDKILQVTSSHSTYRQATVSNIRPFQIMRQHIQQDIAHSFPFKDGMKSHLSS
NIQCLKSRCKTASQR
NT seq
5088 nt
NT seq
+upstream
nt +downstream
nt
atggataactactccgcgttaccactgcagtgtctggagatgaccaccaaacggaagctg
attggccggctggtgccgtgccgctgtttccgtggtgaagaggaagtgatctcagtgctg
gactactctcactgcagccttcagcaggtcccaaaggaaatattcagtttcgagagaacc
ttagaggaactctacctggacgccaaccagatcgaagaactacccaagcaactcttccag
tgccaggccctaaagaagctgagtttgcctgataacgacctttccaatcttcccaccacc
atcgccagcctggttaacctcaaagagttagacattagtaaaaacggaatccaggagttt
ccagataatataaaatgctgtaaaggcctgtctgtggtagaagctagcgtcaaccccatt
accaaactcccagatggtttcacgcagcttctgaatctgacccagctcttcttgaatgat
gccttcctggagtatctgcctgctaactttggcaggctctccaaattacggattctggag
ctgagagagaaccacctgaaaaccatgccaaagtccatccacagactgacacagctggag
aggctggatctggggagcaacgaattctccgaaatgccagaggtgttggaacagatgcac
agccttaaggagctgtggctggataacaactctctacagtctatacctgggtctataggg
aagcttcgccagttgcggtacttggatttggccaagaatcgcattgagacgttggatagt
gacgtctctggctgtgaggccttagaagatctgctgctgtcctccaacatgctgcagcac
ctgccggactctataggaatgctaaagaagctgaccactctaaaggtagatgacaaccag
ctgacctcactgcctcacaccattgggagtccgaagccaaagcaaggcctatctctgttg
gaggaattggactgcagctgtaatgagttggagtcgttgcctcccaccgtcggctacctg
cacagcttgagaacttttgctgcagatgagaacttcctcacacagctgccgcgggagatc
ggtaactgcaagaacgtgacggtgatgtcacttcggtccaacaagctggagtttctgcct
gacgaaatcggacagatgaccaaactgcgcgtgctcaacctcagcgacaacaggttaaag
aatctaccgtttaccttcaccaagctgaaggatctggcagctctgtggctctcagacaat
cagtccaaagctttgatcccgctgcagacggaagcccaccctgaaaccaaacagaaagtt
ttgaccaactacatgtttccacaacagcccaggcatgatgaagattaccagtcggatagc
gacagctttaatcctacactgtgggaagagcaaagacagcagaggatgactgtggccttt
gactttgaggacaagaaggacgaggaagacaactctgggaaggtcaaggtggagataaac
ctgaagcgctacccaacgccgtaccctgaggatctgaagaacatggtcaaatcagtgcag
agtcttgtgggtaaaagcatgcatccaggacatgggcaccagcatcagctgagctcaggc
actgccacctcagcaggaaccaacatggagcatgcacacctcagcaaagagcagtacgag
cctccgtggcccctgcccccaaaagagttgatgcaggtgtttgattcatttgacggacga
aatgaaactgtttgccaggtgaccgacagagagatgcaggacttctctcagtctcagcta
atggatcaaggaccaatgcataattctggcatcgacatccccaagaggaaggacaaggag
gacttgacagaaagttcggaggactcgatgggcggctctcctaatgacatccgtatctcc
gatatgaggccaacgctggtggagccaccaatgtacaaaccaaaggtggtgctgctgggg
aaggataagaaagagtcgacagacgaggaggtcgataagctccactgtctgaaccacagc
ggctcctcggccacctactccgactactcaccctcacagggctcctcgggctcctccaat
ccatccgccaacacacactcacacacacaccctcatgcgcacgcacacactcctgccctg
cccacccccagtaaggaccaggcccctcaaacacactggaccaacagacttgcacagtca
ttcccaaagcctattgactccaagcccctgctgtctcagagagaaacccctccatcggga
acgctgcagcaacggggagatcggcgtccactcagcgagccttttgattggtcggaggct
caacactatgacaacacgggttttgacgctgaggagtctcagatggacccgatgtcttct
catacaagtcagggtaatccgccgctgggctccaaaccccgcagccagtcggctcatgga
cgccggcccctcctcaggcaagatcgaatcgtaggagtccccttggagctggatacccag
acgctcccctaccacggtaaccagcgctccaccccggataacgacccacaatcctctgga
ccttcttcccaaaatccctggcagaattggaccaggacgcccagcccattggaggacagg
actgctttcccctcaaagctggacctgacgccaacctcaagccccaatcctgaccgtaag
gacatggactcaagactggagcagggctcaggacctttgcccggatcctggacgtatcac
aacagccagggggagcagatcaggaaggatcagctcatcgtcagcgggggaaacaaggtc
acagtggtgatgagtaaaagctctgaccgactttcccccatgatgaaggagaccagatcc
aagtttaagaagtcccagagcattgatgagatcgacattggctcctataaagtctacagt
attcctatggaaagctacagttcatccattgagcagcagaccagtttggaccgcccagag
ctccctggttccatggagcagaccagcatgtcacggtctcagtctgcccccatgttagat
gatgagctgggcttcccaggacacggaggcggcaaccagaatcagtctggacaaaatcaa
aaacctgccattcctcacaaggcctatcattttgaccagaactacaacccccaggtgacc
atagatcgcaggatccctcctcccttccctaacacaccagattatgtaaaccactcctca
aaggccatggattacttgagtcaaccgggaaagacgctacccaaggagcttgtgagtcct
cggtatcgcgcgtatccaccgctggagatgttttcattcccccaagcctcaatcaaccag
gacggcccgtccagccagcagcagcaaacgatctcaactcagcgctccaggccaggcttt
ctgaggagagccgactctttggtgagctctactgagcttgccttgtttcgcagagttcat
gaagcccagcaggaggcgctacaggaagctcagtacaagcatcagatggacccgcctcat
tacagtcgggctcttgcctactcgtcccccatggagcattctgccctcaccaacatgtct
gacaaccaaaatcagatgatgcacaacaagagaaatggtcgctacgacgacgactacacc
acttaccaggagcagaagaagcccatgattggttatccgaccaaaagtctgactcaacgt
cgccccctgtctgctaggagctacagcaccgaaacgtacggagcatctcaggcccgcccc
gtgtcggctcgccccaccatggctgccctgctggagaagatgccgcccgactacaccctg
gccaccttccccgagaaaccgtctgaggacaccatcaaagtgagacccgtcgtcccgcag
aaacccgaggacatcacctccaagatgcccgccgactggaggcagcaactcctcaggcac
atagaggccaaacggttggacaggagtggtgtcctaaagcacaacacgctcaccctgggc
atgctctatcagggcgggggtcacggccaggggcgcagcaccactttgaactttaacctt
tacaataacactaggcatgagccccctgctggccgctggctgccactacctccgcctccg
tctgccatcatcacgccgtctcagcaggctgcaatgctggataatgaccaggagggggtg
acagggagcaaccagtgggctccctactcacttggtcggagagacgttccgcctgagaac
ctcatgaaaaagggcggacattcacacaacccctcccatcagtcacacaacaccatgatc
gtcacctccacctcctcatcctcagccaccgtgcctcaccgcgttgtcgggcagcaggtt
tatgacgggatgatgaacaaggggggccaataccaacagggaatgtcgctgtcagtggta
ccagcaggcggtccgggccagtaccaaggcaacgtctcacagggcctcccctcccctggc
caggcgtaccccagtggcggcctccccatggcgctgtcatcatctggaaaccaatctcag
tacaacccccacacctcccatcagccagctaccaatccgcagtaccacgtgaatcagggc
atgacccacagcaaccaggccgtcatggcgacccacaccaacccccggcctcagagcgct
cgctgcctgctgcagactaaaggccagaaaagcacggatggtttccaagagcagctgtgt
gtgaggatagagaagaaccccggcctcggcttcagtatctctggcggcatcagcggccag
gggaaccccttcaaaccctccgacatgggtatctttgttactagggtacagcatgacggg
cccgccgcctcctcactgaagcccggagacaagatactgcaggtaacatcctcccactcg
acatatcgtcaggctacagtcagcaacatccgaccttttcaaataatgaggcagcatatt
cagcaggacatagcacacagttttccattcaaagatgggatgaaatctcatcttagtagc
aacatacagtgcctaaagtcacgttgcaaaactgctagccaacgataa
DBGET
integrated database retrieval system
