Xiphophorus couchianus (Monterrey platyfish): 114151298
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Entry
114151298 CDS
T05908
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114151298
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114151298
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Major cadherins
114151298
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
114151298
NCBI-ProteinID:
XP_027884229
LinkDB
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Position
9:complement(617573..642744)
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AA seq
1154 aa
AA seq
DB search
MIRLARSSLVLFLFGIQAIVVVRTHLLRHKREWVLPPVPLTENQDYTQKEFIAKIRSDRQ
IGTNVIYSLEGVGANQHPFHVFVVDPLNGNVRVTRKLDREEIPLYKLAGFAKFPNGTEAE
AKIDLQIKVVDENDNAPTFESSVLTAEVDELSPKGTSVITISATDKDDNTTDHAKIAYVI
KHQEPRDYFTMTKDGTISVNNVLDREKDKSVLLTVTGQDMYGASGGHIATATVTINIRDV
NDNPPTLEKEAYEGDIEENTSGVEVMRIKAQDLDIDMDNWEAVFEIVQGNEDGYFSIKTD
PVTNEGILFLEKPVDFEDVKDMNLALAVRNKAPLVDGSGSAGGANIGFGGGAGGAGGAGG
AGGSSGASGSSGASGSGATGASGASGASGASGASGAGGAWGSKFKTYPIKINVKNQPEGP
HFEPKVKSIPIKEGTPIDVNKVIARYPAIDKDTGKPAEDVKYLKGSDPQNWLSIDPKTAE
IKLNKMPDRESPFLVNGMYMAEILCITEGMPSKTATGTVAIQVEDLNDHCPELTSNFMPV
CKSNKRIIVNAKDEDAFPNGPPFKFSILPGSTTVDWKMMPYNDTAVVLTTYDDVRPAHSD
LMLVVEDQQKLSCPKPQKLTVFFCDCTEIDDCSNKETIKRIGSKPALGPAGIGLLFLGVL
AILLIPFLMILVQCGNLSAYNDMFAKMPYETKQHLISYNTEGQGELTESAFKNLPLQSQK
SDVDFVQMVQSSGFGMEQSVASMYQGASSEYRDGLLGMSHWEKSGSHFESEGRQSRGGAA
TECFNDISLPDSYLRGYYNNKLASGDEKIVQKDHMLVFDYEGTGSSAGSVGCCSNLQQDY
DLEFLDNLGPSFKTLAEICGGKKVQTETTKVDTPLPNPSVNNIQVSVPKLVTRQEMSLPS
KVQPAKSTTEQTLISKTSKTTEHAKIRESKATVREGMTSVQTGKAQNQMLVVNQQQPVYF
TTAPMLQPIQYVVQQPLQNAMILAETPGPNIQHMVMVNGTDFGSSQGVIVQGQTMMPSAQ
PQSLGAVLVDSNGIQGTTGNMVHSGNFSGAQNMMVVEGQVPVGTVKVLNGNEARLIQGGT
MLNDLSGCQTMLKIGESSSIGQQLQDGRGVFQTAEVAGVQNLHDLSAGESSCSKSRTSSN
TLSTTRTIHKTVVQ
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgattcgactggcccggtcatcattggtgttatttttgtttgggattcaggctattgtt
gtggtaagaactcatctgttgcgacataaaagagagtgggttcttcctccagtacctttg
acggaaaatcaagactacactcaaaaggaatttattgccaagatccgatcagaccgacag
attggaacaaatgttatttactccttagagggtgtcggggcaaaccagcatccttttcat
gtgttcgtggttgaccctcttaatggaaatgttcgagtgaccagaaagcttgacagggag
gagattcccttatacaaacttgctggttttgctaaattcccaaatggcactgaagcagag
gcaaaaattgacctgcaaattaaggtcgtagatgagaatgacaacgctccgacatttgag
tcatcggtgctgacagctgaggtggacgagcttagtcctaaagggacttcagttatcaca
attagtgccactgataaagatgataacacgacggatcatgctaagatcgcctacgtcatc
aaacaccaggaacctcgtgattatttcaccatgaccaaagatggcacaatctctgtcaac
aatgtcttggacagagaaaaagataaatcagtcctgctgacagtgactggccaagatatg
tacggtgcatcagggggacacattgcaacagccactgtcactatcaacattcgggatgtg
aatgacaaccccccaactttggaaaaagaagcatatgaaggagacattgaagagaacaca
tctggtgttgaggtgatgaggatcaaagcacaggatctggacattgatatggacaactgg
gaagctgtttttgaaatcgtccaaggcaatgaagatggatatttcagcataaaaactgat
cccgtcaccaacgagggcatcctgtttctagaaaagcctgttgactttgaggatgtaaaa
gacatgaatctggcgctagcagtgaggaacaaagctccactggttgatggatctggttca
gctggtggagctaatataggttttggaggaggagccggtggtgccggcggtgccggtggt
gccggtgggtccagcggtgccagtgggtccagcggtgccagtggcagtggtgccactggt
gccagtggtgccagtggtgccagtggtgccagtggtgctagcggggctggtggtgcctgg
ggtagcaaatttaaaacctatccaataaaaatcaatgtaaaaaaccaaccagaaggacca
cattttgaacccaaagtcaaatctatccccatcaaggagggaacacccatcgacgtgaat
aaagtgattgccagatatcctgcaatcgataaagatactgggaaaccagcagaggatgtc
aaatatttaaaaggctcagaccctcagaactggctcagcattgaccccaagacagctgaa
atcaaactgaacaagatgcctgacagggaatccccattcctggtcaatgggatgtacatg
gctgaaatactctgcattaccgaaggaatgccaagtaaaacagcgactggcacggtagcc
atccaggtggaggatctcaatgaccactgccctgagctgaccagtaacttcatgcctgtg
tgcaaatccaacaagaggatcattgttaatgccaaagatgaagatgcatttcctaatggc
ccaccttttaagttttccattctccctgggagcacaacagtagattggaaaatgatgcct
tataatgatactgcagtagttctgacgacatatgatgatgtgcggcctgcccacagcgat
ctgatgcttgtggtggaagaccaacagaaactctcctgtccaaaaccacaaaaactgaca
gtctttttctgtgactgtacggaaatagatgactgttcaaacaaagaaaccattaaacgg
attgggtcaaaaccagcattaggacctgcaggcattggacttctttttctgggagttttg
gccatactacttattccctttttgatgatactggtccagtgtgggaatctgtcagcctat
aacgacatgtttgctaagatgccttatgaaacaaaacaacatctcatttcatacaacact
gagggccaaggagaactaacggagagtgcgttcaaaaatcttcctttacaaagtcaaaaa
tctgacgttgactttgtacaaatggtacaaagttcaggttttggaatggagcagtctgtt
gcttccatgtaccaaggtgcttcaagtgagtacagagacggactgttggggatgtctcat
tgggagaaaagtggctctcactttgagtctgaaggcagacagtcaagaggaggagctgca
acagaatgtttcaatgacatctcattgccagacagctacctgagaggatactacaacaac
aagcttgctagtggagatgagaagattgtgcaaaaagatcacatgttggtgtttgactat
gaaggcactggctcctctgctggctccgttggctgctgcagcaatttgcaacaagactat
gacctggagttccttgataatcttggaccaagctttaaaacacttgctgagatatgtgga
ggtaaaaaagtccaaactgagacaacaaaggtggacactcctctacctaatccttctgta
aataacattcaagtgtcagtaccaaagttggtgacaagacaagagatgtccttgccatcc
aaagtgcagccagctaagtccacaactgagcagactttaatcagtaaaactagtaaaaca
actgagcatgctaaaataagggagagcaaggccacagtgagggaagggatgacctcagtg
caaacagggaaggcacagaaccagatgctagttgtaaaccaacaacaacctgtctatttc
accactgcacccatgctgcagcccatacaatatgttgttcagcagccacttcagaatgcc
atgatactagctgaaacacctggccctaacattcagcacatggtaatggttaatggcact
gactttggctcttcccagggagttattgttcaaggccaaacaatgatgcctagtgcccaa
ccccagagccttggggcagttctggtggacagcaatgggatccaaggaaccactggcaac
atggtccactcaggaaacttctctggcgcccaaaatatgatggttgttgaaggccaggtc
cccgtaggaacagtgaaagtattaaatgggaatgaggctaggctcattcaaggtggtaca
atgctaaatgacctgtcaggatgtcagacaatgctgaagattggggagtcaagcagcata
gggcagcagcttcaggatggaagaggtgtctttcaaacagctgaagtcgctggggttcaa
aaccttcatgacctcagtgctggggagtccagttgctctaagagtcgcacctcttccaac
acactcagtacaacccgtactattcataaaactgttgtgcaatag
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