Xiphophorus couchianus (Monterrey platyfish): 114151308
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Entry
114151308 CDS
T05908
Symbol
myof
Name
(RefSeq) myoferlin isoform X1
KO
K22125
myoferlin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114151308 (myof)
Membrane trafficking [BR:
xco04131
]
Endosome - Lysosome transport
Others
Ferlins
114151308 (myof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
DUF383
DUF5955
Motif
Other DBs
NCBI-GeneID:
114151308
NCBI-ProteinID:
XP_027884238
LinkDB
All DBs
Position
9:complement(3472457..3513091)
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AA seq
2067 aa
AA seq
DB search
MLRVIVESATGLPKKKLGSPDPIVSVTFKDEKKKTKSIDNEVNPVWNEVLEFDLKGVPLD
SGSQLDVVVKDYETIGKDKFLGSTKVSLRDLASGKSRSLPCKNVPLVNDNGQGIGATIDL
VVAYDPPASAVPNPNDPQDGNAAVDAAGGGGGDEEGNEAVPDGAQSGPAGAPSSSDQPGA
LRQRLNRVQSRQRLANKPQDFQIRVRVVEARQLSGNNIKPVVKVHVCGQTHRTRIKKGNN
PFFDEIFFYNVHMLPSDLFEQNISFRVYNSYSLRADSLMGEFMLDVGYVYDEPAHCVMRK
WLLLNDPDDSSSGAKGYLKVSLFVVGTGDEPPMEKRESQDDQDDIESNLLLPAGVTLRRA
TLSLKVFRAEDIPQMDNAFAQTLKGIFGGEENKKNLVDPFLEARFAGKKLCTQIIEKNAN
PEWNQVLNLQVKFPSMCERIKLTVYDWDRLTGNDAVGTTYLNLTEIASSGGEIEEEHADN
GEMALFEEMTSAAVSPADSGESQVGFLPVFGPCYINLYGSPREFTGLPDPYEALNLGEGE
GVSYRGRVLVELSTKLEGKADKAVESIHSDDILVVQKYQRRRKYCLCAVFHSASMIQEPG
EPIQFEVSIGNYGNKLDTTCKPLASTTQYSCAVFDGNHYYYLPWANTKPVVVLTSFWEDI
GHRLDSVNIILYITHRLQSNLDAFKTAILAKVPDSQLAEVWMKLLNQLIEDLDSFPTPDL
EGRSNLTSLDIQIKKLRDGALTSIKVAARRMREEAREIPDTLPDIESWADKLNQLADEPQ
NSMPDVIIWMLRGEKRVAYSRIPAHQILYSTYSEQACGQHCGQTRTIFLKYPMDKTKGLK
VPVQVRVNMWLGLSAQEKRFNAFSEGTFSVFAELYENQAKVFGNWGTTGLVGRHKFSDVT
GKLKLKQEYFMPPRGWEWESDWFIDPEKALLTEADAGHTEFMDEVFQNESRFPGGEWKAA
SEPYTDVNGEKSRNPKEFDCPPGWTWEDSWTVDINRAVDDQGWEYGVTIPPDDKPLSWVP
AEKMYHVHRRRRLVRPRKRAPRPAGAAPERRDQGDPAGWEFSSLIGWKFHQNERSSDSFR
RRRWRRKMAPEDRLGACAIFQLEGALGVDTEDKEKGSKGDATKLFGANTPTVSCTFDRSY
MYHLRVYLYQARNLISMDKDSFSDPYAHVSFLHVSKTTEKLRATLNPTWDQTLIFSDVEI
YGDPKNVGANPPDVVLEFYDSDQVGKDEQLGRSVCVPLVKLNSEMDQTPRLLWHPVIQKG
QRSGEALVAAELILKDKSGEGDLPLVPPKRAENLYMVPQGIRPVVQLTAVEILAWGLRNM
KTYQLAAVSSPSLVVECGGQRVETAVIKNMKKSPNFPGSVLFIKVLLPKDEMYTPPIVVK
VIDHRPFGRKPVVGQCTITSLEEFRCDPYVVTSEGARASKMALMMTAPRKDVAITMDEGR
PLLEAQHAEKEKETVDWWSKFYASVGDQEKCGPYTRKGYDTLKVYDRELENIDDFKGLTD
FCNTFKLQRGKNENGDEDPTVVGEFKGAFKVYPLPDDPSIAAPPRQFRELPESGPQECLV
RIYVVRAIDLQPKDNNGRCDPYIKISVGRNTVDDRDNYLPNILNPVFGRMFEMTCFLPQD
KDLKIAVYDYDLLTRDEKVGETVIDLENRFMSRYNSYCGLPQTYCISGINQWRDQLKPSQ
ILENLARLKGLSKPRTEDNGTSLTFNGKDYTLAQFESNTEIHQHLGPPLERLCLHVLRTQ
GLVPEHVETRTLYSSFQPNLSQGKLQMWVDVFPKSIGLPGPPFDITPRKPKKFFLRAVIW
NTTDVTLDETSITGENMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFVFGFDYL
PAEQLCLVSKKEHFWSLDNTEFRIPPKMLLQIWDNDKFSLDDYLGTLELDLRKLVPPAKT
PEKCSLNMMDNLEIVTPDKPTTAKSLFAQQSVRGWWPCSIEQDGKRVLGGKVEMTLEIVS
EAEADERPAGKGRDEPNMNPKLDFPNRPETSFFWFTNPCKTMKFIVWRRFKWVFLGLIIL
IIVVLFIAILLYSLPNYISMKIVKPLQ
NT seq
6204 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgggtcatagtagagtctgccacgggtctccccaaaaagaaactcggcagtcct
gacccaatcgtttctgtgactttcaaagatgagaagaagaaaaccaaatcgatcgacaat
gaagtgaaccctgtctggaatgaggtgctggagtttgatctgaaaggcgttccgctggac
tccggctcccagctagatgtggttgtgaaagactatgagacgattgggaaagataaattc
cttgggtccactaaggtttctctgcgagaccttgcctctggaaaatcgagatctttgccg
tgcaaaaatgttcctctggtcaatgacaacgggcaggggatcggagctacgatagacctg
gtggtcgcctacgaccctccagccagtgccgtgccgaaccccaacgacccccaagatgga
aatgctgcagtggacgccgcaggaggaggaggtggggatgaggaggggaatgaggctgtt
cctgacggggcccagagtggcccagctggagccccttcatcctccgaccagcctggggct
cttcgccagaggctgaaccgggtgcagagtcgccaacgactcgccaataaaccccaggac
ttccagatccgtgttcgggtcgtggaagcccgtcagctgtccggaaacaacatcaagcct
gtggtgaaggtccacgtgtgtggacaaacccaccggacgaggatcaagaagggaaacaac
ccgttctttgacgagatcttcttctacaacgttcacatgctgccgtcggatttgtttgaa
cagaacatcagcttcagggtgtataattcatattcactgagggcagacagccttatgggt
gaattcatgctggacgttggttatgtttatgatgaaccagcccattgtgtgatgaggaag
tggctcctgttgaatgacccggacgactccagctctggcgctaaaggctacctcaaagtc
agcctgtttgttgtggggacgggagacgagcctccgatggagaagagggagtctcaggat
gaccaggatgacatagagagcaacctgctgctgccagcaggagtcaccctgcggagggcc
acgctgtccttaaaggtgttcagggctgaggacattccccagatggacaatgcatttgcc
cagacgttgaaaggaatctttggaggagaggaaaacaagaagaacctggtggatcctttc
ctagaggcgcggtttgctggcaaaaagttgtgcactcagatcattgagaagaacgcgaac
ccggagtggaaccaagttttgaaccttcaagtcaaattcccgtccatgtgtgagcgcatc
aagctgactgtgtacgactgggatcggctgacaggaaatgatgctgttggcaccacatac
ctgaacctgaccgagatagcctcctctggtggagagatagaagaggaacatgcagataat
ggggaaatggcattgtttgaagagatgacctctgctgccgtctccccagctgactcagga
gagtctcaggtgggtttcctgcccgtgtttggaccctgctacatcaacctgtacggcagt
cccagagagttcacgggccttccggacccctacgaggctctgaaccttggcgagggagaa
ggagtttcgtacaggggcagggtactagtggagctctccacgaagctggaggggaaagca
gacaaagcagttgaaagtatccacagtgacgacatccttgtggttcagaagtaccagcga
agaagaaaatactgtctgtgcgcagtcttccacagcgcctccatgatccaggagcctggc
gaacccatccagtttgaggtcagcattggtaactacggcaacaaactggacaccacctgt
aaacccctggcctccaccacccagtacagctgtgctgtatttgatggtaaccattactac
tacctgccctgggcaaacactaagccagtggttgttctcacgtccttctgggaggacatt
ggtcaccgcctcgattctgtcaacatcatcctctacatcacacaccgcctgcaatccaac
ctagatgcatttaaaacggccatattggctaaagttcccgacagccagctggcagaggtg
tggatgaagttactcaatcagttgattgaagacttggacagtttccccacccctgacctg
gagggccgctccaacctgacatctctggacatccagatcaagaaactacgagacggcgct
ctgacgtccatcaaggtggcagcgagacgcatgagagaggaggccagggaaatcccagac
acgctgccggacatagagagctgggcggacaagctcaaccagctggccgacgagccccag
aacagcatgcctgacgtgatcatctggatgctgcgcggtgagaagcgtgtggcctacagc
cgcatcccggctcatcagatcctctactccacctacagcgagcaggcctgtgggcagcac
tgtggccagactcggaccatcttcctgaagtaccccatggacaagaccaaaggcctgaag
gttccagttcaggtcagggtcaacatgtggctgggcctctctgcacaagagaaaaggttc
aacgccttctcagagggaaccttcagtgtgtttgctgaactgtatgaaaaccaggctaaa
gtgtttgggaactgggggaccaccggactggtgggccgccacaagttctccgatgtgacg
ggaaaactgaagctgaagcaggaatacttcatgccacccagaggatgggaatgggagtcc
gactggttcatcgacccggagaaagccctgctaaccgaggcagacgccggacacacagag
ttcatggacgaggtgttccagaacgagagccgtttccctggtggcgagtggaaggccgcc
tcggagccatacacagacgtgaacggagagaaaagccgaaaccctaaagagtttgactgt
cctccgggctggacgtgggaggacagctggacggtggacatcaacagagctgtggatgat
caaggctgggagtacggggtgaccattcctccagatgataagcccctgtcctgggtccct
gctgagaagatgtatcacgtccatcggcggaggaggttggtccggccccgaaagagagcg
ccgcgtcccgccggagcggctccggagaggagagatcaaggtgaccccgcgggatgggaa
ttctcctccctgatcggctggaagttccatcaaaacgagcgctcctcggactcgttccgt
cgacggcgctggaggagaaagatggcgcccgaagatcgcctcggagcctgcgccatcttt
cagctggagggcgcattaggcgtcgatacagaggacaaggagaaaggctccaaaggcgac
gccaccaagctgtttggtgccaacacccccaccgtgtcctgcacctttgacaggtcgtac
atgtaccacctccgagtgtatctctaccaggccaggaacctgatctctatggacaaagac
agtttctctgatccgtacgcacacgtttccttccttcacgttagcaagacgaccgagaag
ctccgggccactctgaacccgacctgggaccaaactctgattttcagcgacgtggagatt
tacggagaccccaagaacgtcggcgccaatcctccagacgtggtgctggagttctacgac
agcgaccaagtggggaaggacgagcagctgggccgcagcgtttgcgtcccgctggtgaag
ctgaactctgagatggatcagacgcccaggctgctgtggcaccccgtcatccagaagggc
cagaggtctggggaggcactcgtggctgctgaactcattcttaaagacaagtcgggtgag
ggggatcttcccctggttcccccaaaaagagccgagaacctctacatggtccctcagggg
atccggccggtggtgcagctcacagccgtggagattctggcgtggggtctgaggaacatg
aagacgtaccagctggcggcggtgtcttcccccagcctggtggtggagtgcggaggccag
cgggtggagactgctgtgatcaagaacatgaagaagagccccaacttccccggctccgtc
ctcttcatcaaagtgctccttccaaaggatgagatgtacactcctcccatcgtggtgaag
gtgattgaccaccggccgtttggcaggaagcctgtggttggtcagtgcaccatcacctct
ctggaggagttcaggtgtgacccatacgtcgtcacttccgagggagccagggcctccaag
atggctctgatgatgactgcgcctcgtaaggacgttgccatcacgatggacgagggccga
ccgctgctggaggcgcagcacgcagaaaaggaaaaggagacggttgattggtggagtaaa
ttctacgcctcagttggagaccaggagaaatgcggcccttacaccaggaaaggctacgac
acccttaaagtgtatgaccgtgagttggagaatattgacgatttcaaagggttgaccgac
ttctgcaacacatttaaactgcagcgaggcaagaacgaaaacggggacgaagaccccacc
gtggtcggagagttcaagggggcgttcaaagtgtaccccctgccagatgaccccagcatt
gctgccccgccccggcagttccgcgagctgccggaaagcggaccccaggagtgtctggtc
aggatttatgtggttcgggcaattgacctgcagcctaaagacaacaacggcagatgtgac
ccgtacattaaaatatcagtgggccgaaacacagtggacgacagagataactacctgccc
aacatcctaaaccctgtgtttggaaggatgtttgagatgacatgtttcctgcctcaagac
aaggacctgaaaattgccgtgtacgactacgatctcctgactcgtgacgaaaaggtcggc
gagacggtcatcgacctcgagaaccgcttcatgtctcgatacaactcctactgcggcctt
cctcagacctactgcatctctggcatcaaccagtggcgggatcagctgaagccgtctcag
atcctggagaacctggcccgactgaaaggcctgtccaagcccaggacggaggacaacggc
acgtcgcttacgttcaatggaaaagattacacgttggctcagtttgaaagcaacacggaa
attcaccagcacctgggcccgccgctagaacgcctctgtctgcatgtcctcagaacacag
ggactggttcctgaacacgtggagaccaggaccctctacagctccttccagccaaatctg
tctcagggaaagcttcagatgtgggtagacgtcttccccaaaagcatcgggctccctggt
cctccctttgacatcacaccccgcaaacccaaaaagttcttcctgcgagcggtcatctgg
aacaccaccgacgtcactctggatgaaaccagcatcacgggagagaacatgagcgatatc
tacgtgaaaggctggatgccgggcatggaggaggacaaacagaagactgatgtccactac
aggtctctggatggagacggaaactttaactggcggtttgtctttggctttgactacctg
ccggctgaacagctctgcctcgtttccaagaaggaacacttttggagtcttgacaataca
gagttcaggattcctcccaagatgctgcttcagatatgggataacgacaagttctcattg
gacgattacttgggcacgctggagctggatttacgcaagctggtccctcctgccaaaact
ccagagaaatgctccctgaacatgatggacaatctggaaattgtaacgccagacaaaccg
acgactgccaagtctctgtttgctcagcagtcagtcagaggctggtggccttgctccatc
gaacaggacgggaagagagtactgggtggtaaagtggagatgacgctggagattgtgagt
gaagcagaagcagacgagagacctgcaggaaaaggacgggacgaacccaacatgaaccca
aagctggactttcctaaccgtccagaaacctctttcttctggttcactaacccctgcaag
accatgaagttcattgtatggagaaggttcaagtgggtgttccttggactcatcatcctc
atcatcgtcgtgctcttcatcgccatcctgctgtactctttaccaaactacatctccatg
aagatcgtgaagccgctccagtga
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integrated database retrieval system
