Xiphophorus couchianus (Monterrey platyfish): 114151397
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Entry
114151397 CDS
T05908
Symbol
mindy4
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase MINDY-4
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114151397 (mindy4)
Enzymes [BR:
xco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
114151397 (mindy4)
Ubiquitin system [BR:
xco04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
114151397 (mindy4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
Motif
Other DBs
NCBI-GeneID:
114151397
NCBI-ProteinID:
XP_027884382
LinkDB
All DBs
Position
9:11767500..11776060
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AA seq
690 aa
AA seq
DB search
MVPSVEEISSSLVREYLSRKGLKRTIACMDEEHPRTPASINNRSLLKQMLNIEDLYRQNK
IQKSPVKTLLEIIVKHHIERLHHENITTGDSQQVVPNTGAASDYRAGSPSMINETKADEI
TPAICSTKHSELSSEVKEICSIPVTDLTMISKKDGPTSLNPNDFLIDNTDYQEGQQPMPS
KKENYTRKEKESKCLIAGVTSKTKTSRIRRGMVAGPVAQESNRKRHSQRVEVSQPLFIRD
QESRETQGGLELTAKNTSSCEEQNLESIDLKEENQEEKDFRSKGQKTVNTIKVQMKPDAH
ELKMAEMVLDDIDDSGGLPEVSLRSAVSKFKFPGRPMDHRNTMELKTILLGSSLSCFSTE
WKNQGFTFSDTHDLGYGIVQRKGGPCGVLASIQAFFLKKLLFENTDGGDVILQRLRPSSS
TRRHCLVLALAEVLWRAGEEKQAVVAINSGRSHFTTFGHYRSEELFEKMTCFSVDNIKDL
QVILEQHIEQYEMGMFGCVLLVISAVLSRSIEKVREDMDLHTTPLIGAHGYCTQELVNLL
LCGRAVSNVFDNNIELDSGNGNMTLLKGIKDQCQVGLLSLFEHYNICKVGAYLKSPSYPI
WVVCSESHFSVLFGLQRELLTNQDEDLEFDLYYYDGLANQQEEIRLTVSLGKLAQKHHQV
DADLIPPLELCIRTQWKDASVNWNETEPIL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggtcccttcggttgaagaaatttcttcgtctttagtgcgggaatatctgagcaggaag
ggcctgaaaaggaccattgcttgtatggatgaggaacatccacgcacgcctgccagtatc
aataaccgatcactgctgaagcagatgcttaacattgaagatctctacagacaaaataag
attcagaaatcgcctgtgaaaacattgttggaaatcatcgtgaagcatcacattgaacgg
ttacaccatgaaaatatcaccacaggagactctcaacaggtggtcccaaatacaggcgca
gcatctgattaccgtgcaggatcaccatcaatgataaatgaaacaaaagcagatgaaatt
acaccagcgatttgttctaccaaacacagtgaactgagttctgaagtgaaagaaatatgc
agcattccggtgacagacttaacaatgatttcaaagaaagatggacccacttccttgaat
ccaaatgatttcttaattgacaacacagattaccaagaaggccagcaaccaatgccttcg
aaaaaggagaactacacccgaaaagagaaagaaagtaaatgtttgattgctggggtcacc
tcgaaaaccaaaactagccgcatcaggcgaggcatggtggccggaccagtagctcaggaa
tctaacagaaaaaggcatagtcaaagggttgaagtttctcaaccattgttcatcagggat
caggaaagcagagagactcagggtggacttgagttgactgccaaaaacacatccagctgc
gaagaacaaaatctagagtctattgatttaaaagaagaaaaccaggaagaaaaggacttc
agaagtaaaggacaaaaaacagtaaacacaataaaagtacagatgaaaccagatgcccat
gagctgaaaatggctgagatggttttagatgacattgatgactctggtggtctgcctgaa
gtgtctcttcgtagcgctgtttcaaagtttaaatttccaggccgtccaatggaccatcgc
aacaccatggaattgaaaacaattcttctgggttccagcttaagttgttttagcactgag
tggaagaatcagggttttaccttttctgacacacatgacctcggatacgggattgtgcag
agaaagggtggtccttgtggagtcctggcatcaattcaagcattttttctgaagaagctt
ctgtttgaaaacactgatggcggagatgttatccttcaacgactaagaccttccagcagc
accagaagacactgtcttgttttggcactggctgaagttttgtggagagccggggaggaa
aaacaagctgtagttgcaataaattcaggaagaagccatttcaccacatttggacactac
agatctgaggaattgtttgaaaagatgacgtgtttctctgtggataacatcaaagatctg
caggtcattctagagcagcatattgagcagtatgaaatggggatgttcggatgcgtcctg
ctggtcatctcagctgttctttctcgatccattgaaaaagtgagagaggacatggacctc
catacaaccccactgataggagctcatggctactgcactcaggagttggtgaatctgttg
ctctgtggcagagctgtttctaacgtctttgacaacaatatagagctggactcaggaaat
ggcaacatgactttgcttaagggaattaaggaccaatgccaagtcggcctgctgtccttg
tttgaacattataatatctgtaaggtgggggcttacctgaagtctccttcttaccccatc
tgggtggtgtgcagtgaaagtcacttcagtgtgctgtttggcctgcagagggagctattg
acaaatcaagatgaagacctggagtttgatctgtattattatgatggattggccaatcag
caggaggaaatccgcctcactgtttctctcggcaaattggcacagaaacaccaccaagtt
gatgctgatctaattcctccacttgagctctgcatcaggacacagtggaaagatgcatca
gtcaactggaatgagaccgaaccaattctctga
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