Xiphophorus couchianus (Monterrey platyfish): 114151480
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Entry
114151480 CDS
T05908
Symbol
ftsj3
Name
(RefSeq) pre-rRNA processing protein FTSJ3
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xco03009
]
114151480 (ftsj3)
Ribosome biogenesis [BR:
xco03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
114151480 (ftsj3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
MDH
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
114151480
NCBI-ProteinID:
XP_027884521
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All DBs
Position
9:complement(11349710..11357474)
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AA seq
858 aa
AA seq
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MGKKLKVGKTRKDKFYHLAKETGYRSRSSFKLIQLNRKFQFLQKARALVDLCAAPGGWLQ
VASKFMPVSSLIIGVDLVPIKPIPNVVTLQEDITTDKCKQALRKELQTWKADVVLNDGAP
NVGTNWQHDAFSQAHLTLMALKLACEFLTKGGTFITKVFRSKDYQPLLWIFQQFFKKVQA
TKPQASRNESAEIFVVCQGYVAPDKIDSKFFDPKHAFKEVEVQAKTVKELVAEKKPKAEG
YTDGDLTLYHSFTVTSFLKAENPVDFLAKASEITFDNPLLESHSATSNEIKECCRDIKVL
GRKELRLLLSWRAKLRRYLAKRLKEEAKQLDQEISLTSDEEGINSEDESGVKKKKKEKVD
ENKEKDDDDEEDEMERKLADLKAQEVAELKRKKRKLLKERRKQRERVELKMDLPGVSIAS
TTDSSLFSLSSLKKQQVLTDISKGDMEAAGNLGDGDGDIYLSDQDEDVDEISLASDLDEE
DLEEVQQKQKELEKKAPKKVKFTKEAEEEEEQDGGLLVELEGKNEKLERETNMWFSKGIF
SEIDLEGDAENELKQTEWLQTKQSGRGRKRKAEEESEDKVEDEEEKEEVAPAEVETPEPS
QEATEESDSDDSSDDENEITKMKQAMGSGGAAGGAEDDNFQVVPVESTSKKARILDAEGL
SLGCEIATSKKKARDLVDFSFHRFANSDEPWEVPEWFLDDERKHRTRPMPVTKEMVEEYK
QKWKEINARPIKRVAEAKARKKRRMLKKMEQAKKKAEAVVNTADISEREKMAQLKSIYKK
AGVKKEKREVTYLVAKKGVGKKVSRPRGVKGLFKVVDGRMKKDMRGVQRKEQRGKGKRGK
GGKGKGRQPKGGKGKRGK
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaattaaaagtaggaaagacgaggaaagacaaattctaccatcttgcgaaa
gaaacaggttatcggtctcggtcttccttcaaactcatccagttgaaccgtaagttccag
tttctgcagaaagcgagggctctggtggatttgtgcgctgctcctggaggatggttgcag
gtagcatcaaagtttatgcctgtttcaagtctcatcattggtgtcgatttggtccccatt
aagcccattcccaacgtggtgacactgcaagaagacatcacgactgataagtgcaaacag
gctctccgtaaggagcttcaaacttggaaagcagatgtggtgttaaatgacggagcccca
aatgtgggaaccaactggcagcatgatgccttttcccaggctcacctgaccctcatggct
ctgaagctggcctgtgagtttttgaccaaaggcggcactttcatcacaaaggttttccgc
tccaaagactaccagccgctgctgtggatcttccagcagttcttcaagaaggtgcaggcc
actaagcctcaagcatccaggaacgaatctgcagaaatctttgttgtctgtcaaggttac
gtcgccccagacaaaatcgacagtaaattctttgaccccaagcatgccttcaaagaggtg
gaggtgcaggccaaaactgtaaaggaactcgtcgctgagaagaagccaaaggcggaggga
tacactgatggtgatttgacgctgtaccacagttttacagtgacgtcttttctaaaggcc
gaaaaccctgtcgactttctggcaaaagccagcgagatcacatttgacaatccactcttg
gaatctcactctgccaccagcaatgaaataaaggagtgctgtcgggatatcaaagtcctg
gggcgcaaagaactccgtttgctgctgagttggagagcaaaacttagacgatatctagca
aagagactgaaggaagaggccaagcaacttgaccaggagatcagtttaacttcagatgag
gagggcatcaactcagaagatgaatctggtgtaaagaagaaaaagaaagaaaaagttgac
gagaacaaggaaaaagatgatgatgatgaggaagatgaaatggagagaaaactggctgac
ctaaaagctcaggaagtggctgagctcaaacggaagaagaggaagctgctgaaggagagg
aggaagcagagggagagagtggagctgaagatggacctgccaggtgtctccatcgccagc
accaccgactcatccttgttttccttatcttctctcaagaagcagcaggtgctgactgat
atctccaaaggggacatggaggctgcgggtaatctgggagacggagacggtgacatctac
ctttcagatcaggacgaagatgtggatgaaatttccctggcatctgatttggatgaagag
gatttagaagaagtgcaacagaaacaaaaagagctggaaaaaaaagcgccgaagaaagtg
aagtttactaaggaagctgaggaggaagaggaacaggatggtggcttgctggtagaactg
gaaggaaagaatgaaaagttggagcgagaaacaaacatgtggttcagcaagggcatcttt
tcagaaattgacctggaaggtgatgcagagaatgaactcaaacagacagagtggctccaa
accaaacagtcagggagagggagaaagaggaaagctgaagaagagagtgaagataaagta
gaagacgaggaagaaaaagaggaagttgctcctgcagaggtggaaactccagaaccgtca
caggaagcaacagaggaaagcgactcggacgacagcagcgatgatgaaaatgagattaca
aaaatgaagcaagccatgggatccggaggggcagcaggaggggctgaagatgacaacttc
caggttgttcctgttgaaagcaccagtaaaaaggcccgtatcctggacgcagagggtctg
tccctcggctgtgagatcgctacatccaagaagaaagccagagatctggtagacttctct
ttccacaggtttgccaactctgacgagccatgggaagtaccggagtggttcctggatgat
gaacgcaaacacaggacacgaccgatgcctgtcaccaaggagatggtggaggaatacaaa
cagaaatggaaagagatcaatgcccggccaatcaagcgggtggctgaagcgaaggccagg
aagaagagaaggatgctgaagaagatggagcaagccaagaagaaggccgaggctgtcgtc
aacactgccgacatttctgaaagagagaagatggctcagctgaagagtatctacaaaaaa
gcaggcgtgaaaaaggaaaaaagagaagtaacatacttggtagccaaaaaaggagttggt
aagaaggtgagtcggcctcgtggagtgaagggactcttcaaagtggtggacggacgcatg
aagaaggacatgcggggggtgcagaggaaagaacagcgagggaaaggaaaaagaggaaaa
ggaggaaaaggaaaaggacgacagcctaaaggtggtaaagggaagagaggaaaataa
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