Xiphophorus couchianus (Monterrey platyfish): 114151508
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Entry
114151508 CDS
T05908
Name
(RefSeq) occludin-like
KO
K06088
occludin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03272
Virion - Hepatitis viruses
xco04514
Cell adhesion molecules
xco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
114151508
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
114151508
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
114151508
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
xco01009
]
114151508
Protein phosphatases and associated proteins [BR:
xco01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
114151508
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
Spectrin_Anc-1
FapA
Motif
Other DBs
NCBI-GeneID:
114151508
NCBI-ProteinID:
XP_027884568
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Position
9:complement(28174357..28196667)
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AA seq
545 aa
AA seq
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MFDKQHYESPPVYSPPYSPPSNNGFGPAGSFHGPQSDYNAYPPPPGSYYIEDRPQHFYKW
RSPPGIIKAMMATVIVLCLAIFACVASTLMWDMQYSYGGGYYGSGLGYGSGYSGGSYGSS
YGGLGGYGGYGGYGGYGNYYGSYVSPYSAKTAMIAMAAVNFVSCMSFFIASFSKSSVVRG
RKYFLAVLIASVLMGVLQGIMTIVYIVGVNPMAQSSSNIMYNPMLMMCQSLYQTSYSQMG
GLGGFPMYNQYLYHYCFVDPQEAIAMVCGFLVVIALGVAAFFAQKTRGKIWRYGKPNIYW
QEPLVGGKTSEGRDVEEWVNNVEESRSVQDAPTLLVSEKGGGLLNASANSVSSFPPAKVD
STSYNEDDNQYSEKITSRPLEGYSHGGRTSSSPSEETGGRRPAANRGKRRRRNPDMDESQ
YETEYTTGGETGNELDAEEWESVYPTITSDSQRHEYKREFDSDLREYKRLCAEMDDINDR
LNKLSRQLDTLDESSAKYQVVAEEYNQLKDLKQTSEYQSKKRECRRLRHKLFHIKRMVKD
YDKNH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaagcaacattacgagagtccaccagtctacagccccccctacagcccgccg
tccaacaacggcttcggtcctgccggcagcttccatggccctcagagtgactacaacgca
tacccacctccgccgggatcttactacatcgaagaccggccgcagcacttctacaaatgg
cggtcacctcctgggatcatcaaggccatgatggctacagtgatagtgttgtgtctggcc
atattcgcctgcgtcgcttcgactctaatgtgggatatgcagtactcatatggaggcggc
tactacggctccggtctgggctacggcagtggctactctggaggcagctacggctcgtcc
tacggaggccttggaggttacggaggttatggaggttatggaggctatgggaactactac
ggctcctacgtgtctccttactcggccaaaactgccatgattgccatggcagctgtcaac
tttgtcagctgtatgtcattcttcatcgccagcttctctaagtccagtgttgtccgtggc
cgaaagtacttcctggccgtccttatagccagcgttctcatgggggtcttgcagggcatc
atgaccattgtctacattgtcggagtaaatcccatggcccagagctcttccaacattatg
tataatccgatgctcatgatgtgtcagagcctctatcagaccagctactcacagatggga
ggactgggaggttttcctatgtacaaccagtacctgtaccactactgttttgtggacccc
caggaggcgattgccatggtgtgcggattcctggtggtcattgctttgggcgtcgctgct
ttctttgctcagaaaacaagagggaagatctggcgctacggaaaaccaaatatctactgg
caagagcctctagttggtgggaaaacgtcagaaggcagagacgtagaggaatgggtgaac
aatgtggaggaaagccgcagcgttcaggatgcgccgactctgctggtgtccgagaaggga
ggcggtttgctcaacgcctcagccaacagcgtcagctccttcccccccgccaaggtggac
agcacctcctacaacgaggacgataaccaatactctgaaaaaattacgagccgtccatta
gaggggtattcccacggcggcaggacgagctccagcccctcggaggaaacgggaggccgc
cggccagccgccaacaggggcaagaggcgcagacgcaaccctgacatggacgagtcccag
tacgaaacggagtacacaactggaggagaaacaggaaacgaactggatgcagaggaatgg
gagagtgtgtacccgacgataacttcagattctcagaggcacgaatacaagagagagttt
gattcagacctgcgggaatacaagcgcctgtgtgcagagatggacgacatcaacgaccgg
ctgaacaaactcagccggcaactggacacactcgatgagagctcagctaaataccaggtt
gttgcagaggaatataatcagctgaaggatctgaagcagacttcagagtaccagtctaag
aagagggagtgccgtaggctgaggcacaaactgttccacatcaagcgaatggtgaaggac
tacgacaagaaccactga
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