Xiphophorus couchianus (Monterrey platyfish): 114151871
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Entry
114151871 CDS
T05908
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114151871 (mms19)
03400 DNA repair and recombination proteins [BR:
xco03400
]
114151871 (mms19)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114151871 (mms19)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
114151871 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_2
API5
Sec7-like_HUS
Cnd1
Motif
Other DBs
NCBI-GeneID:
114151871
NCBI-ProteinID:
XP_027885156
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All DBs
Position
10:17526480..17546559
Genome browser
AA seq
1036 aa
AA seq
DB search
MRNPQRSDRGTMAAESPLLLSLVEEFVSGLQDSKAKDTATAVKDGQFTVLQLVEALGPSL
TSSQPHTRARGVQLLSEVLQDNCGALTEREVELLLAFYENRLKDHYVITPPVLRGLLALT
KSRKLPPGSAVSMLRSVFQDVHVQSLMLAERACVYNMLINLMESREDELKGLGADFVFGF
VQSMDGERDPRNLLLAFQIARNILLRGYNMGKFTEELFEVTSCYFPIDFSPPPNDPHGIT
KEELTQALRAVLTGTPKFAKFLLPLIIEKLDSDVQSAKLDSLQTLAASVGQYEHRDLAEF
LEGLWSSLRREVFQTSSEKIEAAGLAAVAALTSCLSRSVLNSDSEDSLSSFLGLVLRDCK
HHLFEPDLKLVWPSAKLLQAACNASYRAAHSITSAVVPPLVEQYNSRTQCSHRRTLLEVA
QRFIQSTASCQSVDHDESLFSAYKDSLCSLVFSALSESNSSLQITAASVLTSLAQQPGLL
LDSDIELAVDHLTRLLLTDEDERVSVAVVECAGALAERHPAAFITKLIPTLKKEMLSDRR
ESSELHSHHAVRQRCLSVLAAVSVQASVVMEGAPILLDVLGSAHADPDRFSVDEVVRACL
SLQRIAERVQDGEDTSRCFHDVIVPRLLSLALQAALQNDGSSGRRSPLVEEEVLSAMVPV
ISTTFSRLQTFAEQTASRAVSLFLDGDVSFLPDNSFPPRVQLLQQQQEESSWRQTQLVCL
LMACVCSLPRSVALSQEERLLSELEELSCSCRHPFSYTSAAKCFAGLVNKKPQGPSLDSL
IQGVIKRVSSELDRPSSPLRTQAFTLLIWVAKALLLRYHPLFSVLTDKLFTLLDDALLGP
MAADSFSLLMSDSADVLNRGCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKANYLKAL
SNIVNKLPKQVQVSELPALLSLLLEALTCPDEGVQLSTLSCLQPVLINPPQVLVLQLEAL
VSRLLALIGSPAMKIRMASIRCVLTLSRFPAHEVLPFRSRVLRALAPPLDNRKRLVRREA
VQARAEWFLLGSPGGR
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatccccaacggagtgacagaggcacgatggctgcagaaagtcctttgctgctg
tctctggtggaggaatttgtctcaggacttcaggacagcaaggcgaaggatactgcgaca
gctgtcaaagatggacagtttaccgtcctgcagctggtggaggcactcgggccgagcctt
accagctcccagcctcacactcgggcccgaggggtccagctgctctctgaggtcctgcag
gacaactgcggggctctaacagagagagaagtcgaactgctcctggccttctacgaaaac
cgcctgaaggaccactacgtcatcacgccgccggtgttgcgagggctgctggcgctgact
aaatccaggaagctgcctcctggttcagctgtgtcgatgctgaggtctgtgtttcaggat
gttcacgtacagtctctgatgcttgcagagagagcgtgtgtctacaacatgctcatcaac
ctcatggaaagcagggaagacgaactgaagggtttgggcgcagattttgtttttggtttc
gtccaatcaatggacggcgagagggatccccgcaacctactactggccttccagatcgcc
agaaacatccttctgcggggatacaacatgggcaaattcaccgaggagctgtttgaagtg
acgtcctgctacttccccatagatttctccccgccacccaacgacccccatggcatcacc
aaagaggaattgacccaggcgctgagggccgtcctcaccgggacccccaagtttgcaaag
ttcctgctgccgctcatcatcgagaagctggactcagacgtccagagcgccaagctggac
tcgctgcagaccctagctgccagtgtgggacagtatgagcacagagacttggctgagttc
ctggagggactgtggagctcgctgcgcagagaggtgtttcagacatccagcgagaaaatc
gaggcggcaggcctcgccgccgtcgccgcactcacttcctgtctctctcgctctgttctc
aactctgactctgaagactccctcagctccttcctgggtctggtgctcagagactgtaag
caccacctgtttgagcccgacttgaagctggtgtggcccagcgctaagctactgcaggcc
gcctgcaacgcctcctacagggcggcccacagcattacaagtgctgtcgtgccccctcta
gtggagcagtataacagcagaacgcagtgttcccacaggcggacgctgctggaggtggca
caacgattcatccagtcaactgcttcatgtcagtctgtagatcacgatgagagcttgttt
tctgcgtataaggactccctgtgcagcttggtgttctcagctctgtctgaaagtaactcc
agtctgcagatcacggccgcctcggtgctcacctctctggcccaacaaccaggtctgctg
ctggactctgacatcgagctcgccgtggaccacctgaccaggctgctgctgacggatgag
gatgagagagtcagtgtggctgtggtggagtgcgccggagccttggccgagcggcaccct
gctgccttcatcaccaaactgatcccaacgctgaagaaggagatgctttctgaccgaaga
gagtcgtctgagctgcattcccatcatgcagtgcgtcagcgctgcctgtccgtgctggct
gcagtgtccgtccaggccagcgtcgtcatggagggcgcgcccatcctcctggacgtcctc
ggctcggcacacgctgatcctgatcgtttctccgtggacgaggtggtgcgcgcctgcctg
agcttgcagaggatagcagagcgggttcaggacggcgaggacacgagccgatgctttcat
gacgtcatcgtcccacgcctgctttctctggcgctccaagctgcgctgcaaaacgacggg
tcatctgggcgtcgtagtccgctggtagaggaggaggtcctgtctgccatggttcctgtt
atcagcaccaccttctctcgcctgcaaacgtttgcagaacagacggcctccagggccgtg
tctctctttctggacggagacgtctcgtttctgcccgacaactccttcccaccgcgcgtt
cagctgctccagcagcagcaggaggagtcatcatggcgtcagacccagttggtgtgtcta
ctcatggcctgtgtgtgttcgttacctcgcagcgtggcgctatcccaggaggagcggctg
ctctcggagctggaggagctgagctgcagctgcagacacccgttctcctacacgtcggct
gccaagtgctttgccggcctggtcaacaagaagcctcaagggccttctcttgacagttta
attcagggagtgataaagagagtgagcagtgagttggaccgaccctcctcccctctgcgc
actcaggccttcacacttctgatctgggttgccaaggctctgctgctacgataccaccct
ttattttcagtgctaaccgacaagctcttcactctgctcgacgacgccctcctcggccca
atggctgctgacagcttctcgctactgatgagcgactctgccgacgtgctgaaccgcggt
tgccacgccgacgtccgcatcatgtatcggcagcgcttcttcagcgagaattctgccaag
ctggtgcagggcttcaacgctgcgccacaagagaagaaagccaactacctgaaggctctg
tccaacatcgtcaacaagttgccgaagcaggtccaggtgtctgagctgcccgctctcctg
tctctgctgctggaggccttgacctgtcccgacgagggcgtccagctgtccactctgtcc
tgcctgcagcccgtcctcataaaccccccgcaggtcctggtcctgcagctggaggccctg
gtcagccggctgctggcccttattggcagtccagccatgaaaatccgcatggcctccata
cgatgcgttctcactctctcccgtttcccggctcacgaggtgttgccattccggtcgcgc
gttctgcgagcgttggctccgcccctggataacaggaagcggctggtgaggagagaggcg
gtccaggccagagcggagtggttcctgttaggaagccctggtggaaggtga
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