Xiphophorus couchianus (Monterrey platyfish): 114151938
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Entry
114151938 CDS
T05908
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
114151938 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xco02000
]
114151938 (slc24a1)
Transporters [BR:
xco02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
114151938 (slc24a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
DUF4667
BUD22
Motif
Other DBs
NCBI-GeneID:
114151938
NCBI-ProteinID:
XP_027885298
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Position
2:complement(12644451..12650789)
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AA seq
722 aa
AA seq
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MMHCHRRKRLQLSRVLFLLSGVFLCTLYQLTISARLQAPMPVAQIGEDFGEGSTEGVEDA
TAEPGQLEEPLTTAPKLELTDQTTPTYVIPHTDKDLNTNTHMDLTSDYKEASSTESTLLP
TTNRTLVHCIYVAPEPPLVTPTPVPAPPVTTVSPAPPGEAPHVKGEYPEDIFSIEDRRRG
WVLLHIVGMMYMFVSLAIVCDEFFVPALGVITDKLAISDDVAGATFMAAGGSAPELFTSL
IGVFIAHSNVGIGTIVGSAVFNILFVIGMCALFSREILHLTWWPLFRDVSFYILDLILLI
IFFLDNVIMWWESMMLVACYSLYVVFMKFNVQLEREFKTQLHKHKSIVKVIAVEEPEKTN
GEGEDNAPPAPEDKNRLKLKPSLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGDGKFKDK
VETLNSVARRKSEPKSQGKSEGKSGKTEETKEPEAAPAKDAEKKEEPGAKKDDIPAEQGG
SEDSDDSDSDDDDSDEESEESSEDEDEDEDEEEEKEDDPLSLQWPDTPLKQVTYLFLLPI
VFPLWLTVPDVRNQKSRKYFVLTFLGSIMWIAIFSYLMVWWAHQVGETIGISEEIMGLTI
LAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPIPWLLYSFIHGLAPVAVS
SNGLFCAIVLLFLMLLFVIISIAACKWKMNKVLGFTMFLLYFIFLVLSVMLEDRIIVCPV
SI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgatgcattgtcatagaaggaaacggctccagctgagccgggttctgtttcttctctcc
ggagtttttctctgtaccctctaccagctcaccattagtgccaggctgcaggcaccaatg
ccagtggctcagattggagaggattttggagaagggtcaacagagggcgttgaggatgcc
acagcagaacctggccagctggaggaacctctcactactgcacccaaattagagctcaca
gatcaaacaacaccaacgtatgtgattcctcatactgataaggatttaaatacaaacaca
catatggatttaactagtgattacaaagaagcctcttccactgaatccacactgttgcca
accacaaaccggactttggtgcattgcatctatgtggccccagaacctcctctggtgaca
cccaccccagttccagctccaccagttacaactgtctccccagctccacctggtgaagct
cctcatgtcaaaggtgaataccctgaagacatcttttctatcgaagatcgcagacgagga
tgggtgcttcttcacattgtgggaatgatgtacatgtttgtctctcttgcgattgtctgc
gacgagttctttgtgcccgcactgggagttatcacagacaaactggccatctctgatgat
gtagcaggcgctacctttatggcggccggaggctctgcacctgagctcttcacctctctt
ataggagtcttcatcgcccacagcaacgtgggcattggcacaatagtcggctcggcagtt
tttaacattttgtttgtgattgggatgtgtgctttattttctcgggagattcttcatcta
acctggtggccacttttcagagatgtttcattctacatacttgacctcatcttactgatc
atcttcttcttggacaatgtcattatgtggtgggagagcatgatgctggtggcctgttac
agtctctatgttgtctttatgaagttcaatgtgcaactggagcgagagttcaagacccag
ctccacaaacacaagagcattgtgaaggttattgctgtggaagaacctgaaaagacaaat
ggggaaggagaagataatgcccctcctgctccagaggacaagaatcggttaaagttgaag
ccgtcccttcagcgaggggggagttctgcttctttacacaacagcaccatgagaaacacc
atctttcagctcatgattcacacattagaccctctgggagatggaaagtttaaggataag
gttgagaccttgaacagtgtggccagacggaagtcagagcccaagtcccaagggaaaagt
gaaggcaaaagtggaaaaactgaggagaccaaagagccagaggctgccccagccaaagat
gcagaaaagaaggaggagccaggagcaaagaaggacgatattccagcagaacaaggtgga
tcggaagattcagacgattctgacagcgacgacgatgacagcgatgaagagagtgaggag
tccagtgaagatgaggatgaagatgaagatgaagaggaggaaaaagaagatgacccactg
tctttacagtggcctgacacaccactcaaacaagtcacctacctcttcctgctgcccata
gtctttcctctgtggctcacagttcctgatgttcggaaccagaagtccaggaaatatttt
gtgctcaccttcctgggctcgattatgtggattgctatcttctcctaccttatggtatgg
tgggctcatcaggtgggagagaccatcggcatctcagaggaaattatgggcctgactatc
ctggcagcaggcacctccatccctgaccttatcaccagtgtgattgtggctcgtaagggc
ctgggagacatggcggtgtccagttctgtgggcagtaacatctttgacatcacaatgggc
ttgcccatcccatggctcctgtactctttcattcacggtttggctccagttgctgtcagc
agcaacggccttttctgtgccatcgtgctgctcttcctcatgctccttttcgtcatcatc
tccatcgcagcctgtaaatggaaaatgaacaaggtactgggcttcactatgtttcttctc
tactttatcttcctggtgctcagcgtcatgctggaggatcgcatcattgtctgccctgtt
tccatctga
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