Xiphophorus couchianus (Monterrey platyfish): 114151951
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Entry
114151951 CDS
T05908
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
xco03041
]
114151951
Enzymes [BR:
xco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114151951
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114151951
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
HA2_N
Motif
Other DBs
NCBI-GeneID:
114151951
NCBI-ProteinID:
XP_027885314
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All DBs
Position
10:6624873..6632800
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AA seq
735 aa
AA seq
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MSIESISIEADIFSESWEESSSFGFGDDLELNQFDGLPFSSRYYELLEKRKALPVWKVRS
KFEDALENNQLVIVSGVAQTGSSTQIPQWCAEFCLSAQFQHGVVVCTQTNKRQAVDLALH
VADEMDVNIGHEVGYTIPLETRSSSDTVLRYCTDDMLLREMMSDPFLEQYGVIIIDQAHE
RTVSTDILLGLLKNVLLQRPELKVVVLTMSAVVDRLLGHYGSVPLIKLEISGSPEVVYTK
MNNKDYFYLALALLQEIHLTKEIGNVIVFLASEEDVCRAWSIIQSESPRLEEGLDQITPI
VLCPSQQGSSPLLIEQAGTTNSKRVFLLAPKQEAVWLAGQSVNFVIDTGVQKKMIYNPRA
RAFSEVLQPISQCQADVRKHLCSSAGKCFRLYPEASLPTAEIYPQILDCNITPTVLYLKR
MEIAGLGQCHFMERPDPEGLMQALEELDYLAALDDDGNLSEIGIIMSEIPLDPQMAKALL
ASCEFDCVSEMLTIAAMLSAPSCFLQPAGSMTQEAFKCQRKFQHPEGDHFTLINIYNAFK
QKQKDQYLNVKTWCQDYFLDHSALNIADTIRSELTSTLNRIELPISEPAFGTKTNTKDIK
RALLAGFFMQIARDVDGSGNYLILTNNHVAQLHPFSGYGVQSHKLGLPEWVVFNEYALAE
NSLRTVSEISPQVFNEMAPMYFFYNLPPSESKDILQDMLDSEESRRCTKKETTNRNSDTD
ISCAAGTQTDKCLIQ
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattgaaagcatctccatagaagcagatattttctcggagagctgggaagaaagt
tcgtcatttggttttggagatgatctggaattaaaccagttcgatgggctgcccttttcc
tctcggtactacgagttactggaaaagagaaaggctcttccagtgtggaaggtcaggagt
aagtttgaagatgccctagaaaacaaccagctggttattgtgtctggagtagcacaaact
ggcagcagtacgcagattcctcaatggtgtgcagagttctgcctgtccgcccagtttcag
catggcgtggttgtgtgtacacagactaacaaaaggcaagctgtggatcttgctctgcac
gtagcagatgaaatggatgtgaacatcggtcatgaggtgggctacaccatccctctggag
acccgttcctcctctgacactgtactcagatattgcactgatgacatgttgctgagagaa
atgatgtcggacccttttctggaacaatacggagtaattattatagaccaggcccatgaa
aggacagtcagcacagacatcctgctgggtctcctcaagaacgtcctcctgcagaggcct
gagctcaaggtggtggtcctcaccatgtccgctgtggtggacaggctcctgggtcactac
ggaagcgtcccactcatcaaactagagatctctggttctcctgaggtggtgtataccaaa
atgaacaacaaagactatttttaccttgcacttgcattgcttcaggagatccaccttacc
aaagagattggaaatgtcattgtgtttttggcatcagaggaggatgtctgcagagcttgg
agtatcattcagagtgagagccccagactggaagagggactggaccaaatcacaccaatc
gttttgtgcccaagccagcaagggtcctcacctttactgatcgaacaagcaggcaccaca
aactccaagagggtttttcttttggcccctaaacaggaggctgtgtggttggctgggcaa
tcagtcaactttgtaattgacacaggtgtccagaaaaaaatgatttacaatccaagagca
agagctttctctgaggtgcttcaacccatcagtcagtgtcaagcagatgtgcgcaaacac
ctgtgttcatcagcaggtaaatgtttccgactgtatcctgaagcgagtctacccacagcc
gaaatctacccacagatcttggactgtaacattacaccaactgtcctctacctaaagaga
atggagatagctggtcttgggcagtgtcactttatggaaagaccagatccagaaggtctc
atgcaggccttggaggagctggactaccttgcagctttagatgatgatgggaacttgtct
gaaattggcatcatcatgtctgaaatccccctggatcctcagatggcaaaagctctgtta
gcgtcctgcgagtttgactgcgttagtgagatgctgacaatcgcagccatgctgtcggca
ccaagctgcttcctgcagccagctggcagcatgacccaagaggcattcaagtgtcagaga
aagttccaacatcctgagggcgatcacttcacactcataaatatctacaatgccttcaaa
caaaaacaaaaagatcaatacttgaatgtaaaaacttggtgccaagattattttctggat
cattccgctctgaacatcgctgacactatcagatcagagctgactagcaccctgaaccga
attgagcttcccatttctgaaccggcctttggaaccaagacaaacactaaagacataaaa
agagccctgctggctggattcttcatgcagattgctcgagatgtggatggatcggggaat
tatctcattctgacgaacaaccatgtggcccagttgcacccgttctctggctacggagtt
cagtcacacaaactcggactaccagaatgggttgtcttcaacgaatacgccctggctgaa
aacagcctgagaacagtgtcggagatttcccctcaagtgttcaatgaaatggcaccgatg
tacttcttctacaatctgccccctagtgaaagcaaagacatactgcaagacatgttggac
tctgaggaatccagacgttgcacaaagaaagaaaccacaaacagaaacagtgacactgac
ataagctgtgcagctggaacacaaactgacaaatgtttgattcagtga
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