Xiphophorus couchianus (Monterrey platyfish): 114151981
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Entry
114151981 CDS
T05908
Symbol
atrnl1
Name
(RefSeq) attractin-like protein 1
KO
K24332
attractin
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
xco04091
]
114151981 (atrnl1)
Lectins [BR:
xco04091
]
C-Type lectins
Others
114151981 (atrnl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ATRN-LZTR1
Kelch_KLHDC2_KLHL20_DRC7
GBD_ATRN
Kelch_5
Kelch_1
EGF_LMN_ATRN
Kelch_6
Kelch_4
Kelch_3
Lectin_C
CUB
Kelch_2
EGF_TEN
PSI
NANM
EGF_Teneurin
EGF_laminin
EGF_2
PSI_integrin
TMEM100
RecR_ZnF
Motif
Other DBs
NCBI-GeneID:
114151981
NCBI-ProteinID:
XP_027885370
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Position
10:complement(1743999..1809777)
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AA seq
1378 aa
AA seq
DB search
MEIGGRCKTRHVLFGPKLVSRSDPRGIHKYLVVCALFSFVLLTHASPAKSCDKSCNSGKC
INGSCVCERGWVGDQCQHCQGRFKLTEPSGYLTDGPFNYKFKTKCTWLIEAYPNAVLRLR
FNHFATECSWDHMYVYDGDSVYAPLVAVFSGLIVPETRGNETVPEVETTSGYALLHFFSD
AAYNLTGFNILYSINSCPNNCSGHGKCTPGNSVASRVYCECDKYWKGEACDIPYCRNNCG
SPDHGYCDLTGEKLCVCNDSWQGPDCSLTVPSTESFWILPSVKPFGTSLARASHKAVVQE
KIMWVVGGYTFNYSSFQMILNYNLESGVWNTVPITGGPVPRYGHSLAAFQDDIYMFGGKL
EASWGNVTDELWVFNMPSRSWQRRSPVVGSPAQAHVYAVEGHTAHCVQLSSGETIMLVIF
GYSPIYSYISNVQEYNLRSKVWLVPETKGAVPQGGYGHSSSFDSSSSSVYVHGGYKALPA
GKYGLVDDLYRYEVNSRTWFILRESGFPRYLHSAALLSGTLLVFGGNTHNDTSLSNGAKC
FSADFLAYDIACDKWTVLPKPDLHRDVNCFGHSAVVSNGSMYVFGGFSSVLLNDVLVYRP
PSCQAFVAEEGCVKAGPGVRCIWSRGRCAPWEPSMANGNFSPVPFCSYKTVTVDELCYKF
SDCGSCAANTKGCQWCDDKKCISASSNCTTGVKNFTECPVRIEQVCSKLANCKSCSLNLN
CQWEQNHSQCHSLPAQQCSEGWSQVGDACLRINSSHESYDNAQHYCKNLNGNIASLTTSK
QVDFVLEELKKLQQQEKRLSPWVGLRKINVSYWGWEDMSPFTNSSLRWLPGEPSDSGFCA
YLEEPQVSGLRANPCTATAHGLICEKATGNPNQSSRGSCKKPCSLHTNCANCTSQAMECM
WCGSTRRCVDSNAYVISFPYGQCLEWQTADCMAQNCSGLRTCSQCLDQPECGWCGDPSST
GKGLCMEGSYRGPMKRVAKQGQQSQSHDMNLEPTSCPKDKSFEWAFINCPACQCNGHSTC
VNGSVCEQCRNLTTGPHCETCMPGYHGDPTNGGKCQACKCNGHANVCQVLTGKCFCTTKG
IKGDQCQLCDSENRYLGNPLRGTCYYNLLIDYQFTFSLIQEDDKHYTAINFMASPEQANK
NLDMSINASNNFNLNITWSVGSTAGTISGEEVPIVSKTNIKDYRDSFSCEKFTFRSNPNI
TFYVYVSNFSWPIKIQIAFSQHNSIMDLVQFFVTFFSCFLSLLLVAAVVWKIKQTCWASR
RREQLMRERQQMASRPFASVAVSLDARGELTEVLQPLVDGAPKPVAMEPCFGGKAAVLTV
LMRLPSGLSDLPPPGQSGLIVASALVDISQQKPSDFKDKSQALKNRKALPPAHQGTCV
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggagattggaggaagatgtaagactagacatgttctattcgggccgaagctagtttcg
aggagcgatccgaggggaatccacaaatatctggtggtgtgtgctttgttttccttcgtg
ctgttaacgcacgcctccccggcgaaatcctgtgacaagagctgtaactcggggaaatgc
atcaacggatcctgcgtctgcgaacgaggatgggtcggagatcaatgccagcactgccag
gggaggttcaaattgacagaaccctcaggctacctcacagacgggcccttcaactacaag
ttcaaaacaaagtgcacctggctcattgaggcctaccctaatgcggttctgcggttaaga
ttcaaccactttgccacagaatgcagctgggaccacatgtacgtctatgacggggactct
gtttatgctcctctggttgctgttttcagtggcctgatcgtaccagagacccgaggtaac
gagacggttcctgaagttgagacgacttcaggctatgcactgctacactttttcagcgac
gctgcctacaatctgacaggatttaacatactctactcgataaactcttgtcccaataac
tgctctggacatgggaagtgcacgccggggaactcggtcgccagcagagtgtactgtgaa
tgtgacaagtactggaagggcgaagcgtgtgacatcccctactgcaggaacaactgcggg
agccccgaccacggctactgcgacctcaccggcgagaagctgtgtgtctgcaacgacagc
tggcaaggcccagattgctcgctgactgtaccttcaaccgagtccttctggatcctccca
agcgtcaagccctttggcacctccctcgccagggcatcccataaggccgtggtgcaggag
aagatcatgtgggtggtgggtggatatacgttcaactacagctcattccagatgattctc
aactacaatctagagagcggcgtttggaacacggtgcccatcaccggtggccctgtgcca
agatacggacactcacttgctgccttccaggatgatatctacatgtttggtgggaagctt
gaagccagctggggcaacgtgacagacgagctttgggtgttcaacatgccaagtcggtca
tggcaacgcagaagccccgtcgtcggctcgccggcccaggctcatgtttacgctgtggag
ggccacacggcccattgcgtgcagctgagcagtggcgagaccatcatgctggtcatcttt
ggttactcccccatctacagctacatcagcaacgtacaggagtacaacctgagatccaaa
gtgtggttggtacctgagacaaaaggtgccgtccctcagggaggttacggccacagcagc
tcatttgacagctccagcagcagcgtctacgtccatggaggctataaagctctcccagcc
ggcaagtacggccttgtggatgacctctaccgctacgaagtgaactcgaggacatggttc
attctgcgagaaagcggctttccacggtacctgcactctgcggcgcttctcagtggcact
ctgctcgtcttcggtggcaacacgcataatgacacgtcactcagcaacggggccaagtgt
ttctctgctgacttccttgcatatgacatcgcctgtgacaagtggacagtcctccccaaa
ccagacctgcacagggatgtcaactgctttggccactcggctgtcgttagcaacgggtct
atgtatgtgtttgggggcttttccagtgtcttgctcaatgacgtgctcgtgtaccggcca
cccagctgccaggccttcgtggcagaggaggggtgtgtgaaagccgggccgggggtccgc
tgcatctggagtagaggccgctgtgccccctgggagcccagcatggccaatggcaacttc
tctcctgtacctttctgctcctataaaacagtgacagtggatgaattgtgctacaagttc
tcggactgtgggagctgcgcggcaaacaccaaaggctgccagtggtgtgatgacaagaag
tgcatctccgcctccagcaactgcaccactggcgtgaagaacttcactgagtgcccggtg
cgcatcgagcaggtgtgcagcaagctcgccaactgcaagagctgctcgctgaatctcaac
tgtcagtgggagcagaatcactcacagtgccactctttgcctgcccagcagtgcagtgag
ggttggagccaggtgggcgatgcctgtctgaggataaactccagtcacgagagctacgac
aacgcccagcactactgcaagaacctcaacggcaacatcgcctcactcaccacctccaag
caagtcgactttgtacttgaggagcttaaaaagcttcagcagcaagagaagcgactgtct
ccctgggtgggcttgaggaagatcaacgtgtcatattggggttgggaggacatgtccccc
ttcaccaatagcagcttgcgctggctgcctggagagcccagtgactctggtttttgtgcc
tacttggaggagcctcaggtttcaggcctccgggccaatccgtgcactgcaactgctcat
ggcctcatttgtgaaaaagccactgggaaccccaatcagagtagtcgtgggtcttgtaag
aagccttgctcgctgcacacaaactgcgccaactgtaccagccaagcaatggagtgcatg
tggtgtggcagcacacggcgctgtgtggactccaatgcatatgtgatctccttcccctat
ggccagtgtttggagtggcagactgcagactgtatggctcagaactgttctggactgcgg
acgtgctcccagtgcttggaccagccggagtgtggctggtgtggggaccccagcagcaca
gggaagggcctctgcatggagggctcctatcgggggcccatgaaaagagtggctaagcaa
ggccagcagagccaatcccatgacatgaacctggagccgaccagctgccccaaagacaaa
agcttcgagtgggcctttattaactgccctgcatgccagtgtaacggccacagcacgtgt
gtgaacggcagtgtgtgcgagcagtgtcgcaacctcaccaccggtccgcactgtgagacc
tgcatgccaggttaccacggagacccgaccaatggcggcaaatgccaggcttgtaagtgc
aacggtcacgcaaacgtatgccaggtgttaacgggcaagtgcttctgcaccaccaagggg
atcaaaggagaccagtgccagctatgtgactcagaaaaccgttaccttggcaatccactc
agaggaacctgttactataacctcctcattgattaccagttcacattcagcctcatccag
gaggatgacaagcattacaccgccattaacttcatggcctcacctgagcaggcaaacaag
aatttagacatgtccatcaatgcatcaaacaactttaacctcaacatcacgtggtctgtg
ggctcaacagctgggaccatttctggagaggaggttcccattgtgtcaaaaacgaacatt
aaggactacagggacagtttctcctgtgaaaagttcaccttcagaagcaaccctaacatt
accttctatgtatacgtcagtaacttctcatggcccatcaagatccagattgccttctcc
caacacaacagtattatggaccttgtccaattctttgtaacgtttttcagttgctttctg
tctctgctcctggtggcagcggtggtgtggaagatcaaacagacctgctgggcgtcacga
cgcagagaacagctgatgagagagcgccagcagatggccagtcgtccatttgcatccgtc
gccgtttcgctggatgccagaggagagctaacagaagtcctgcagcctttagttgacggt
gcgcctaaaccagttgcaatggagccatgttttggagggaaggctgctgtgctaactgtc
ctcatgcgtctcccgtctggactttctgacctgcctccacctggacagtcaggactgatt
gtcgccagtgcgttggtagacatctcacaacagaagccatcagatttcaaggacaagtcc
caagctttaaagaaccgaaaagctcttcctccagctcaccaagggacctgcgtctga
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