KEGG   Xiphophorus couchianus (Monterrey platyfish): 114152024
Entry
114152024         CDS       T05908                                 
Symbol
patl2
Name
(RefSeq) protein PAT1 homolog 2 isoform X1
  KO
K24823  protein PAT1 homolog 2
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:xco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:xco03019]
    114152024 (patl2)
Messenger RNA biogenesis [BR:xco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114152024 (patl2)
SSDB
Motif
Pfam: PAT1
Other DBs
NCBI-GeneID: 114152024
NCBI-ProteinID: XP_027885445
LinkDB
Position
2:249950..261306
AA seq 706 aa
MSDSEQQQESDKAAEAQWPENGDAWSEAEDDAGMDCELLQAMAEEDEDINVFNEETFGMD
LDPRGTTESLADGVVSFEEPSPPLRLNPKPPSPPRQKPLYPARVAPWRRGQGSRWRGGLG
RGQMFEDPAVIRIVEGRPSLMSLDSAIVDCGHAVFRNTAVDDRTTPPYWKNRRVSGSILQ
DSAIVCVISHRGRGQHVNSDFLDLPYPVSSYGVQRGGPRRSYSRRVFGQRGSSQINAPVM
PRSPIFSRQPLTPRQHLNQTGGFMFPPNRSCPSTPRPLIPKTMQLRFGANSPRPSPFYSP
STNPVQPFSSFPGPVTQLHPQHKQLLSQKQLLFHRKCEGWDPYSNLMTDKEKEWIIRLQM
IQLQSENPYLEDYYYQEYYRRLEAKMAEEELGIRSKKEPPKLTTPYITKTDAYTPVVHIE
GSLGQVAVSTCYSPRRAIGAVHAVQTHNPLEEQKDTRQQRLEILSKIEKLLIVLLEVEET
ERMKTADLSEAEEIRLMEKTQRKVEHIYSQLQQHNAPDSGDEFLPFLSVSKGKKLLARLL
PFLKNDSALKILHIVASNLPTLISRDTEEDLPVLYPSLRNVIGVLTFSQLINVLKDLTSS
ESLSTFECLSLTCQNKFGLSLLYALLSHGEKLLSSGVPLEPSIGDFETWTDMIFQVAGQL
SQCSLVEPLLLPSNLLTLFCRYLDKRTVHQLKSNLESATSCLALPS
NT seq 2121 nt   +upstreamnt  +downstreamnt
atgagtgattcagaacaacaacaggagtctgataaagcggctgaagctcagtggcctgag
aatggagatgcgtggagtgaagcagaggatgatgcggggatggactgcgagctgctgcag
gccatggccgaggaggacgaggacataaatgtcttcaatgaggagacatttgggatggat
ctcgacccacgtgggacgacggaatcgttggctgatggcgtcgtttcctttgaggagccg
tcgcctccgctgcggctgaaccccaaacctccgtcgcctcccaggcagaagccgctgtac
ccggcccgggtcgccccgtggcggcggggtcaggggtcgaggtggagggggggcctgggc
aggggccagatgtttgaagacccggctgtgattaggatagtggagggacgaccgagcctc
atgagtctggacagcgccatagtggactgtggacacgccgtgttcaggaacactgctgtg
gacgataggacaacgcctccttactggaaaaaccgtagagtttctggatcaatactccag
gacagcgccatagtgtgtgtgatcagtcacagagggcggggtcagcatgtgaactctgac
ttcctggatttaccatatcccgtctcttcctacggagtccagagaggaggacccagaaga
tcgtactccaggagggtgtttggccaaagagggtcctctcagattaatgcaccagtgatg
ccaagatcacccatcttctcacggcaacccttgaccccacggcaacacttgaatcagacg
ggaggattcatgttccctccaaaccgctcttgcccctccactcctcggcctctgattcca
aagaccatgcagcttcgcttcggtgccaactctcccagaccgtccccgttttacagcccg
tccaccaacccggtgcagccgttcagcagtttccccggtccagtcacgcagctccatcct
caacataaacagcttctcagtcaaaagcagcttctgtttcacagaaaatgtgaaggctgg
gacccttactctaacctcatgacggacaaagaaaaggagtggatcattcgcctgcagatg
attcagctgcaaagcgagaatccgtacctcgaggactattattaccaggagtattatcgt
cgattagaagccaagatggctgaggaagagctgggcatcaggagcaagaaggagccaccc
aaactcaccacaccgtacatcaccaagacagacgcctacacaccagtggtccacatcgaa
ggctctttgggtcaagtcgctgtctccacgtgttattctccgcgccgtgccatcggtgca
gtccatgcagtccaaactcacaaccctctcgaggaacaaaaagacaccagacaacagcga
ctagagattctcagcaaaatagaaaagttgttaatagttttgctggaggtggaggaaact
gagaggatgaagaccgcagatttgtctgaagcagaagaaataagattaatggaaaaaact
cagaggaaagtggagcacatctactctcagctgcagcaacacaacgctccagattcagga
gacgagtttcttcctttcttgagtgtctcgaagggcaaaaagcttctcgctcgtctgctg
cccttcttgaagaacgattcagcgctgaagatcttgcacatcgtcgcctccaaccttcct
acgctgataagcagagacaccgaggaggaccttccagttctttacccgtcactccgaaat
gtgatcggcgttctgacgttcagtcagctcatcaacgttctcaaagacctgacgtcttca
gagtctctgtcgaccttcgagtgcctctccctgacctgtcagaacaagtttggactcagc
ttgctgtacgctcttctttcccacggagagaaacttctttcttcaggcgttcctcttgag
cccagcattggcgacttcgagacctggactgacatgattttccaggtagcgggacagttg
tcccagtgttcgctggtggagccgctcctcctcccatcaaacctgctgacgctcttttgc
agatacctcgacaagcgtactgtgcatcaactaaaaagcaatttggagtctgcaaccagc
tgcctggctctaccatcttaa

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