Xiphophorus couchianus (Monterrey platyfish): 114152117
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Entry
114152117 CDS
T05908
Name
(RefSeq) glutamate receptor ionotropic, delta-1-like isoform X1
KO
K05206
glutamate receptor delta-1 subunit
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114152117
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114152117
Ion channels [BR:
xco04040
]
Ligand-gated channels
Glutamate (ionotropic)
114152117
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
114152117
NCBI-ProteinID:
XP_027885651
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Position
10:12230223..12691563
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AA seq
1076 aa
AA seq
DB search
MEMLILLFHSLWILQCNTASADSIIHIGAIFEENAVRDDEVFQLAVSDLSLSDDILHSEK
ITHSIKLIEPNNPFQAVQEACELMNQGILALVTSTGCASASALQSLTDAMHIPHMYIQRN
GDGSPRTACQFNPSPGGQRYTLAARPPVRLNNVMLTLMEELRWQKFILFYDIEYDIRGLQ
GFLDQTSRQGVDVALQRVDRNISKVFTNLFTTMRTEELNRYRDTLRRAILLLSPQGAHTF
IQQAVETNLASKDSHWVFVNEEISDTEILELTHSALGRMTVIRQIFPLWKDSSTRCMRQN
HRISSLLCDPQEGYLQNLEVSNLYLYDSVLMLANAFYRKLEDRKWHSMASLNCIRKSTKP
WNGGWSMLETIQKGNITGLTGIMDFKESGSNSHVQFEILGSSFSETFGKDIKRLATWDSV
HGLNGSLKESRIENGMQGLTVKVVTLLEDPFVMVAENILGQPKRYKGFSIDVLDALAKIL
GFKYEIYQVADSKYGSQLPNGSWNGMIGDLINKRADLAVSAITITPERENVVDFSKRYLD
YSVGILLRKPEEKINIFSLFAPFDLAVWACIAAAIPVVGVLIFLLNRLQALRSSSSQNAP
PGHLSNGVGSGTLHSAIWIVYGAFVQQGGDGMVGSVALRIVMGSWWLFTLIVCSSYTANL
AAYLTVSRMDHAIRSFQDLARQIDVEYGTVRDSAVYDYFRNKGTNPLEQDSTYAELWRTI
SKNDGMDYSVSSPSEGIRKAKKSPYAFLWDMAVLEYAALTDDDCTITVSGNSMSSKGYGI
AMQHGSPYRDLFSQKILELQEKGDLDIMKQKWWPRTGRCDLSSHVSAHPDGRSLKLHSFA
GIFCILAAGLLLACLVAGLEAWWNSNRCRQEQPKEVTKDYRLARVSGPLTYNDITTASSE
GRRDIWTDRERGWDEAEAIDTGQGGESGTGASSYEQSFGRGFGPQADPRSLYRDLCAGHR
QHAAQPGLSSAGAGVRAGLPALGPHCDHLPARGGTPTSPSSPPSPWGDPRQDTAPVPGPW
QHHVAPAPPSQQHQPQRHHAVQTPGSQRGALPAEPWQDTHANVLPGSLRRTHTRSH
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgctgatactgttatttcattccttgtggatattgcagtgcaacacagcgagc
gccgactccatcatccacatcggtgcaatatttgaggagaacgcagtgcgggacgatgag
gtgttccagctcgccgtgtccgacctcagtctgagtgatgacatcctgcacagcgaaaag
atcacgcattccataaagctcatcgagcccaacaaccctttccaggcggtgcaggaagcc
tgcgagctgatgaaccagggcatcctggcattggtcacctcgacaggctgcgcctcggcc
agcgccctgcagtccctgacagacgccatgcacatcccgcacatgtacatccagaggaac
ggcgacggctcccccaggacggcctgccagttcaacccgagccccggagggcagcgctat
acactggcagcccggccgcccgtacgcctcaacaacgtcatgctgacgctcatggaagag
ctgcgctggcagaagttcatcttgttttatgacatagagtatgatatccgtggcttgcag
ggcttccttgatcagacgtcccgtcagggcgttgatgttgcgttacagagggtggatagg
aacatcagtaaagtcttcaccaacctgttcaccaccatgaggacggaggagctgaatcgg
taccgggacacgttacgcagagccatccttctgctcagcccgcagggggcgcacacgttc
atccagcaggctgtggaaacaaatttggcctccaaggacagtcactgggtgtttgtaaat
gaggaaatcagcgacacagagatcctggagctgacccacagtgcactggggcgcatgact
gtgatccgacagattttccccctgtggaaggacagcagcacccgctgtatgaggcagaac
caccggatctcgtcgctgctgtgcgacccgcaggaaggatacctgcagaacctagaggtg
tccaacctctacctgtacgacagcgtgctgatgctggccaacgctttctacaggaagctg
gaggacaggaagtggcacagcatggcgagcctaaactgcatcagaaagtcgaccaagcca
tggaacggtggctggtcaatgctggagaccattcagaaggggaacatcacaggtctgaca
ggaatcatggactttaaggagagcggctcaaactcccacgtccagtttgagatcctcggc
tccagtttcagtgagacctttggcaaagacatcaaaaggctggcgacatgggactctgtt
catgggctgaacggcagcctgaaggagagtcgcatagagaacgggatgcaagggctgacg
gttaaagtggtcactctgttggaggatcctttcgtcatggtggcagagaacatcctcggg
cagcccaagagatataaaggattctccatcgacgtcctggacgccctcgctaagatcctg
ggctttaaatatgagatctaccaggttgcagacagcaaatacggctctcagcttcccaac
ggctcatggaatgggatgattggggatctcatcaacaagagagccgacctcgccgtgtca
gccattaccatcacaccggagagggagaacgtggtcgacttcagcaagcgctaccttgac
tacagtgtcggcatccttctgcgaaaacccgaagagaagatcaacatcttctccctgttt
gcgccgttcgacctggccgtgtgggcctgcattgcagccgccatcccggtggtgggagtg
ctcatcttcctgctcaacaggttgcaagctctgcgctcctcctcctcccagaatgcaccg
ccgggccatctgtccaacggagtgggttcgggcacgctgcacagcgccatctggattgtt
tatggagcatttgttcagcaaggaggtgacggcatggtcggctcggtggcgctgcggatc
gtcatgggcagctggtggctcttcacgctcatcgtgtgttcgtcgtacacggccaacttg
gcagcgtacctcaccgtgtcacgcatggaccacgccatacggtcattccaggacttggcg
aggcagatcgacgtggagtacggcacagtgagagactccgccgtctacgactacttcagg
aataaaggcacaaaccctctggagcaggacagcacgtacgcagagctgtggagaaccatc
agcaagaacgacggcatggactactccgtgtccagcccatcagaaggcatccgcaaggca
aagaagagtccttacgctttcctgtgggacatggcggtgttggagtatgcggcgctgacg
gatgacgactgcaccatcacggtttcaggaaacagcatgagcagcaaaggctacggcatc
gccatgcagcacggcagcccatacagagacctcttctctcagaagatcttggagctgcag
gaaaaaggtgacctggacatcatgaagcagaagtggtggcctcgcaccggccgctgcgac
ctcagcagccacgtcagcgcccatcccgacggccgctccctcaagctacacagcttcgct
ggcatcttctgcatcctggccgccggcctcttgctggcctgcctggtggccggcttggaa
gcatggtggaacagcaaccgctgccggcaggagcagcccaaagaggtcactaaggattac
agactggcaagggtttctggtccattgacatataatgacattacaactgcttcatcggag
gggaggagggacatttggacagacagagagagaggctgggatgaagcagaagcaattgat
acaggacaaggaggtgaatctggaacaggtgcatcgtcgtatgaacagtcttttggacga
ggatttggcccacaagcagatccccggtccctctatcgagatctctgcgctggacatcgg
cagcatgcagcccagccaggcctctctagtgccggggccggagtccgtgcgggactaccc
gccctcggccctcactgtgaccacctacctgcccggggagggacccccacctccccctct
tccccaccctcaccatggggggaccctaggcaggacactgcccccgtcccagggccctgg
cagcaccacgttgcccctgcaccaccctctcagcagcaccagcctcagcggcaccatgca
gtgcaaacaccgggctcccaacggggggctcttccggcagagccctggcaagacacccat
gccaatgtcctaccaggcagtctccgcaggacccatacccgaagccattga
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