Xiphophorus couchianus (Monterrey platyfish): 114152195
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Entry
114152195 CDS
T05908
Name
(RefSeq) nucleolar transcription factor 1-A-like isoform X1
KO
K09273
upstream-binding transcription factor
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114152195
03021 Transcription machinery [BR:
xco03021
]
114152195
Transcription factors [BR:
xco03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
114152195
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
114152195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Protamine_like
Motif
Other DBs
NCBI-GeneID:
114152195
NCBI-ProteinID:
XP_027885795
LinkDB
All DBs
Position
10:241477..247574
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AA seq
426 aa
AA seq
DB search
MSEREMDVAESAKAWTTANLLKLVGRIRINTPESEKTTSYQSGLLSVNWDKTAFPPYSAK
ECHDKWQKVMKKMRKVRSLPDLIAEAEEVVSKPLLHRRTHPDFPKYPCSPRIDYMKKNFS
RLKKKHPRLAMTEIVVKALKKYNELPDEKKDEYKKRHALERAKYLRKLDNFCKNNNLHCT
RRSRKAKLAAIEGLPVKPPRGALSLFIKEHAAEKPSLGSDFSSNMKKRWRKLDATEKHEY
YTRCLKMRHEYNAKLKEYLDRFDETEKQLFIKEQEIRFMKAKPLSVQRMSPREPKMPSQT
LLTYFARDKRMSLARSKKLWHELPVKEKERYKEQMHSNMEQYSENLQKWFEKLTPEEQTK
YLKQKPSKLRFLDGKKKQVYDREELHLSQPSDSEDEEIIEISSEEDIWSSYEGESGEDWD
MFERHR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgtgaaatggacgttgcagaatctgctaaagcatggaccaccgcaaacctc
ctgaagcttgttggccgtattaggatcaacaccccagaaagtgagaaaacgacaagttat
cagagtggactattgtctgtaaactgggataaaacagcattccctccctattctgcaaag
gaatgccatgacaagtggcaaaaggtgatgaaaaagatgcgcaaagttcggagcctgcca
gacctcattgccgaagctgaagaggtcgtttccaagcctctccttcacagaaggacccac
ccagacttcccaaagtacccttgtagtccaagaatagactacatgaagaagaacttttcc
aggttaaaaaagaagcacccacggctggcgatgacagagattgtggtgaaggcactcaag
aagtacaatgagcttccagatgaaaagaaggatgaatataagaagaggcacgcccttgaa
cgtgcgaagtatttgagaaagctcgacaacttttgtaaaaacaacaatctgcattgtact
cgaagatctagaaaggcaaaactcgctgcaattgaaggcctgcctgtgaagccacccaga
ggtgctctgtctctgttcatcaaggagcatgctgcagaaaaaccttcattgggttcagat
ttctccagcaatatgaagaaacgctggagaaaactggatgcaacagagaagcatgagtat
tacacacgctgtctaaagatgaggcatgagtataatgccaagctgaaggaatatttggat
cgctttgatgagacagagaagcagctattcattaaagaacaagaaatcagattcatgaag
gcgaagcctttgtctgtgcagaggatgtcaccccgtgagcccaagatgcccagccaaact
ctactcacatactttgccagagataagaggatgtctttagccagatctaagaaactttgg
cacgagctccctgtgaaggagaaggaacgttacaaagaacagatgcattcaaacatggag
caatactcagaaaacctgcaaaagtggttcgagaaactgaccccagaagagcaaacgaaa
tatttgaaacaaaaacccagtaaattgcggttcctcgatggcaaaaaaaaacaggtgtac
gacagagaagagctacatctgagtcagccttcagactcagaggacgaagagatcatagag
atcagcagtgaagaggatatttggagcagttatgagggtgagagtggagaggactgggac
atgtttgagaggcatcgctga
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