KEGG   Xiphophorus couchianus (Monterrey platyfish): 114152266
Entry
114152266         CDS       T05908                                 
Symbol
polr3e
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC5
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
xco  Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03020  RNA polymerase
xco04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:xco00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114152266 (polr3e)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    114152266 (polr3e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:xco03021]
    114152266 (polr3e)
Transcription machinery [BR:xco03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     114152266 (polr3e)
SSDB
Motif
Pfam: RPC5 RPC5_C
Other DBs
NCBI-GeneID: 114152266
NCBI-ProteinID: XP_027885894
UniProt: A0A3B5LAS2
LinkDB
Position
10:5226886..5236756
AA seq 686 aa
MASGDEDDPIIEEIDVYLSKSLADKLYLLQYPVRPGTMTYDDVSHLSAKIKPKQQRLELE
MAINTMSPNYCRSKGEQIALNVDGTSYDETNTYRAKMMDKQTFSSMQATTNTSRYAAAVF
RKGELHITPLTGILQMRPGFSYLDKADSKTREREAANEGGDSSQDEAEEEAKAITVRFAR
PESEQARQRRIQSYEFLQKKQAEEPWIHLQYHSAKDSRSDHEKQYLYCQSVDASQNSELV
KTPKEYLAMLMPPLAEEKIAKPVGPSNVLSMAQLRTLPLGEQVKTLMKNVKVMPFANLMG
LLASGTDQTSVLRCIQQVALLVQGNWVVKSDVLYPKNTCSAHSGVPAEVLCRGRDFVMWR
FTKERSVMRKEMTSIIKLPPEDVKEFLEHVASPRVNRGWEFLLPTDADFIKKHPDVAHRQ
NMLWLGIQSKLEKVFNFSKEDFMPKNSPQPEPVHVSGAQRLKFAQERAQDNQASLQRDLD
GRRAGSSVQIKQEPNGDVAEELMDTSSSIHNGSVNGYSSATSPCLDHTNGGSPTNSLTPE
LQDFVTKTFQKHIVLTLNELKRLFNLYLASIPAGQNVFSSISDHMLQDAVLLCHCKQIMV
PFPAQSKLAPDERKVFGLWETGDNFDKHRRLLYDLFTKNHRVRRNVIQARLAQDLGYVSK
AEVDRLLHECCISSAGFWYLKGTLQS
NT seq 2061 nt   +upstreamnt  +downstreamnt
atggctagtggtgatgaggatgatcccattatagaagagattgatgtatatctttccaaa
agccttgcagataaactgtatcttctccagtacccggtgcggccgggcaccatgacctac
gatgacgtcagccatctgtccgctaagatcaaacccaaacaacagaggctggagctggaa
atggccatcaatacaatgagtcccaactactgtcgcagtaaaggagagcagatagcgctg
aatgtggacgggacgtcctacgatgaaaccaacacctacagggcaaaaatgatggacaaa
cagacgttctcctccatgcaggccaccaccaacacctccagatatgcggctgctgtgttt
cgcaaaggtgagctgcacatcacgcctctgacgggaatcctgcagatgagaccgggcttc
tcctacctggacaaagcggacagcaaaaccagagagcgcgaggcggctaacgaaggagga
gattcctctcaggatgaagcggaggaggaagccaaagcaattactgtgaggtttgcccga
cctgagtccgagcaggcccggcaaaggaggatccagtcctacgagttcctgcagaagaag
caagcagaggagccatggatccacctgcagtaccacagtgccaaggacagccgatcggac
catgaaaagcagtacctgtactgtcagtcagtggacgcctcgcaaaactctgagctggtc
aaaactccaaaggagtatttggcgatgctgatgcctccactggctgaggagaaaatcgcc
aagcctgttggtcccagtaacgttctgtccatggctcagctccgcactctgccgctgggg
gagcaggtcaagaccctgatgaagaacgttaaggtgatgccttttgccaacctgatgggc
cttcttgcttccggtactgaccagacatcagtgctgcgctgcatccagcaggtggcgctg
ctagtgcaaggcaactgggttgtaaagagtgatgttctgtatcctaaaaacacctgcagt
gctcatagtggcgttcctgccgaagttctctgtcgtggcagagactttgtgatgtggagg
ttcacaaaggagcgctcagtgatgaggaaggagatgacatccatcatcaaacttccccct
gaggacgtgaaggagttcctggagcacgtggcatctcctcgggtcaaccgaggctgggag
ttcctgctgcccactgatgcagatttcatcaagaagcacccagacgttgctcacagacag
aacatgctgtggctcggtatccagagcaagttggaaaaagttttcaacttctctaaagaa
gacttcatgccaaagaattcccctcaacctgagcccgttcatgtcagcggtgcgcagcgc
ctgaagtttgctcaggagcgagctcaagacaaccaggcgtcgctgcagagggacctggac
ggcagacgtgcaggaagcagcgtccagatcaaacaggaacccaacggcgacgttgcggag
gagctgatggacacttcttcctccatccacaacggttctgttaatggttactccagcgcc
acctccccctgcttggatcatactaacggagggagccccaccaacagcttgaccccggag
ctgcaggactttgtgacaaagactttccagaaacacattgtgctgacgctgaatgagctg
aagagactctttaacctctacctggcttccataccggctggacaaaacgtcttcagctcc
atttccgatcacatgctgcaggacgctgtgctgctctgccactgcaagcagataatggtg
ccttttcctgctcagagtaaattagctcctgatgaaaggaaggtgtttggtctttgggag
acaggagacaacttcgacaagcaccgccgcctgctctacgaccttttcacaaagaaccac
cgggtcaggaggaacgtgatccaagccagacttgctcaggatttgggctacgtgtctaaa
gccgaagtcgatcgactgcttcatgagtgctgcatcagcagtgcagggttttggtacctg
aagggaacgttgcagtcatga

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