Xiphophorus couchianus (Monterrey platyfish): 114152300
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Entry
114152300 CDS
T05908
Name
(RefSeq) F-box/LRR-repeat protein 2-like isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114152300
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114152300
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
F-box_5
LRR_At1g61320_AtMIF1
LRR_Zer-1
LRR_8
SAM_Ste50p
Emr1
Motif
Other DBs
NCBI-GeneID:
114152300
NCBI-ProteinID:
XP_027885945
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Position
2:4554978..4562586
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AA seq
704 aa
AA seq
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MEDSDGEDVTPELPLEVLVYVLSFLHFADRKEASLVCRSWYAASQDLRFQKDVTFSFPAS
AAALALVGSLARRRRCSLRISQLDGFGVSRSLLLQVGECLGPRLEGLALPGSSITEASLL
ALLPCLTALRRLDLRGLDSLFMSGAFLSREEHRRQVRSALSGLEELDLSDLRYLSDLTFT
RLTGCTPRLRRLALAGCHIAFEFDPYGGRPTGAGEDSSALLSLRNLRRLLAQQRATLREL
DLSRTAVTPESLRVIAQVDGLVLEELRLQGCRELTDRSVEVLLQQQRSLRRLDLSGCTEL
RGRSVQAAARGLRALTQLSLSRDWRITERGLAELLSLPSLQSLDLSECLQVSGAELISGL
TPPSAARAQLRVLNLRSCTYLRDAAVLSLSQLLADSLLELDLTSCVNVTDLSVCAIATYL
RRLQVLRLGWCKEVSDWGLLGVAQESQSEPHDGTGDGGPSFTRTFGNMGFFQPPRMPFEE
RPKLATLNQLQQLQQQQAGASLLQLQRLQELDLSACARLTDCSITQVVRFPELQRLSLCM
LPELSDAGLAAVGRSCRSLTSLALSHCPGISDGGVARAAPFLQRLQHLQLACCSNITDRT
LHLLMRHCGRLKTLDVSRCKNISMTTVDLLQSQLPFLENVHHKLIDRCFCRPLTQLAAGS
GRDSSGSRRSSWIIPLPPLPVPTRYFLSTQEKPGNSVDHESLDK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagcgacggagaagatgttacaccggagcttccgctggaggttctagtttac
gtcctgagttttctccacttcgcagacaggaaggaagcgtcgctggtgtgccgcagctgg
tacgccgccagccaggacctgcgcttccagaaggacgtgaccttcagcttcccggcctcg
gcggcggcgctggcactggtgggcagcctggcccggcggcggcgctgcagtctgaggatc
agccagctggacggcttcggcgtctccaggtcgctgctgctgcaggtgggcgagtgtctc
ggcccgcggctggagggcctggcgctgcccggcagcagcatcacggaggcctcgctgctg
gcgctgctgccgtgcctcaccgcgctgcgccgcctcgacctgcgcggcctggacagcctc
ttcatgtccggagccttcctgtccagggaggagcaccggcggcaggtccgctcggctctg
agcggcctggaggagctggacctgtccgatctgcgctacctgtccgacctcaccttcacc
cggctgaccggctgcacgccgcgcctgcgccgcctggcgctggccggctgccacatcgcc
ttcgagttcgacccgtacggcggccggccgaccggcgccggggaggattcgtccgccctg
ctgtcactgcgcaacctgcggcgcctgctggcgcagcagcgcgccacgctgcgggagctg
gacctcagcaggaccgccgtcacacccgagtctcttcgcgtcatcgctcaggtggacggt
ttggttctggaggagctgcggctgcagggctgcagggagctgacggaccgctccgtggag
gttctgctgcagcagcagcgcagcctgcggcggctggacctcagcggctgcacggagctc
aggggccgctcggtgcaggcggcggcgcgcggcctgcgggcgttgacgcagctgtccttg
tcccgggactggaggatcactgagagaggtctggccgagctgctgtctctgccctccctc
cagtctctggatctgtccgagtgtctccaggtcagcggggcggagcttatcagtggcctg
actccgcccagtgccgcccgggcccagctcagggttctcaacctgaggagctgcacctac
cttagggacgcagcggtgttgtcgctctcgcagctcctggccgactccctgctggagctg
gacctgacgtcctgtgtcaacgtgacggacctgtcggtgtgcgccatcgccacctacctg
cggcggctgcaggtgctgcggttgggttggtgcaaggaggtcagcgactggggtctgctg
ggcgtggcgcaggagagccaaagtgagccgcacgacgggacgggagacggcggccccagc
ttcacccggacgttcggaaacatgggcttcttccagccgccccgcatgccgtttgaggag
cgccccaagctggcgacactgaaccagctgcagcagctgcagcagcagcaggccggagcg
tcgctgctgcagctgcagaggctacaggagctggacctgtcggcctgcgccaggctcacc
gactgcagcatcacacaggtggtccgtttccccgagctgcagcgtctgtcgctgtgcatg
ctgccggagctaagcgacgccggcctggcggcggtcggccgcagctgccgcagcctcacc
agcctggcgctcagccactgtcccggcatcagcgacggcggcgtggcgcgggccgcgccc
ttcctgcagcgcctgcagcacctgcagctcgcctgctgcagcaacatcaccgacaggacg
ctgcacctgctcatgcggcactgcggacgcctgaagacgctcgacgtgtccagatgtaaa
aacatctccatgacgacggtggacctcctccaatcacagctgccgtttctagaaaacgtc
catcacaagctgattgatcggtgtttctgtcgacctttgacccagctggcagccggttct
ggccgtgacagctcaggatcccgacgctcctcctggatcattccacttcctccacttcct
gttccgactcggtacttcctgtcaactcaggaaaaacccgggaactcagttgatcatgaa
tcgctggataaatga
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