Xiphophorus couchianus (Monterrey platyfish): 114152306
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Entry
114152306 CDS
T05908
Name
(RefSeq) ran GTPase-activating protein 1-like
KO
K14319
Ran GTPase-activating protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114152306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114152306
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
114152306
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
DUF7182
Motif
Other DBs
NCBI-GeneID:
114152306
NCBI-ProteinID:
XP_027885948
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Position
10:complement(17777849..17786319)
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AA seq
567 aa
AA seq
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MASDDIAQLADALSKTHVGDGELSFKGLGLKLDDSESAAELLGKIEQYPGLRALRLEGNT
VGVEAAKAIAKALESKDQLQRCYWSDMFTGRLRSEIPTALMCLSGALMSAGARLTELDLS
DNAFGPDGVKGIEQLLRSPSCHTLRELRLNNCGMGIGGGKILAEALIECHKKSTAVGSAL
RLKVFVAGRNRLENDGASALAKAFQLMGSLEEIHMPQNGINYAGVMALASAIRHNPELQV
LNFNDNTFTKRGTLAMAQALRHLRNIQVINFGDCLVRSEGAIALAAVLTEGLPVLKELNL
SFGEITAGAALVVAQAVLDKPHMEKVNLNGNCLGEDGCDVLREVLDNVDKGDMLASLSED
EGEPDDEEDEDSDAGDSDGSDECYETGECEEIVKENGMNGGESPEKPQSQAEILSFLSHP
SAEKLSHMKMNLQQEVNVSEPNKAAELFLKIGSLHSQDAEANAAVFEVIDGVLKKVLSAS
ALQSHCFLTTLLVLMGVLKGEGKVKKVPLVPGQLLCLEHAVQQEYFTQDHASVLHTLLSR
NGDALKSCSSAKDRLSSALEKKSHKYH
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcctcagatgacatcgctcagctggctgatgctctctcgaaaactcacgttggtgat
ggagagttgagctttaaaggtctgggactgaagctcgacgactcggagtcagcggcagag
ctgctcggtaagatagagcagtacccgggtctgagagccctgcgcctggagggcaacact
gtgggagtggaagctgccaaagccattgctaaagctcttgaaagcaaagaccagcttcag
agatgctactggagtgacatgttcacaggaaggctccgctctgaaatccccaccgctctg
atgtgtttgagcggtgcactgatgagcgctggtgcccggctgactgagttggacctgagc
gataatgccttcgggcctgacggcgtcaaaggcatcgagcagctgctgaggagtccctcc
tgccacacgctgagggaactgagactcaacaactgtggcatgggaataggaggggggaag
atcctggctgaagcgcttattgagtgccacaagaagtcaacagccgtcggatccgcgctg
aggctgaaagtgttcgttgcagggagaaaccgtctggagaacgatggggcgagtgccctg
gccaaggccttccagctgatgggaagcctagaggagatccacatgcctcagaatggaata
aactacgccggtgtgatggcgttggcttcagccatccgtcacaaccccgagctccaagtc
ctcaacttcaacgacaacaccttcaccaagaggggaacgctggccatggcccaagctctg
aggcacctcaggaacatccaggtgatcaactttggcgactgtctggtccggtctgaagga
gccatcgctctcgctgcagtgttgacagaaggactgccggtcctgaaggaactcaacttg
tcattcggcgagatcacagcgggggcggctcttgtggtcgctcaggccgtcttggacaaa
cctcatatggagaaagtcaatctgaacggtaactgtctgggtgaggacggctgtgatgtc
ctgagagaagttctggacaatgtggacaaaggagacatgctggcctcactcagtgaggat
gagggtgagcctgatgatgaggaagatgaagacagcgatgccggcgatagcgatggaagt
gatgaatgttatgagaccggcgagtgtgaggaaattgtgaaagaaaacggaatgaatgga
ggagaaagcccagaaaaacctcagagccaagcagaaatcctgtcattcctcagtcacccc
tcagcagaaaagttgtctcatatgaagatgaaccttcagcaagaggttaatgtgtctgaa
ccaaacaaagctgcagaactctttctgaagattggctccctgcacagccaggacgctgag
gctaacgcagctgtttttgaagtcattgacggcgttttgaagaaggttctctctgcttcg
gccctccagtcacactgcttcctcaccaccctgctggtcctgatgggagtcctgaaggga
gagggcaaagtgaagaaggtgccactggtcccaggtcagctgctgtgtttggaacatgct
gtccagcaggagtatttcactcaggaccacgcctctgttttgcacactctgctgtccaga
aacggtgatgctctgaagtcctgcagcagcgccaaagacaggctgagctctgctctggag
aagaaaagccacaagtaccactga
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