Xiphophorus couchianus (Monterrey platyfish): 114152404
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Entry
114152404 CDS
T05908
Name
(RefSeq) ras-related protein Rab-40B-like
KO
K07928
Ras-related protein Rab-40
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114152404
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
xco04031
]
114152404
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
114152404
GTP-binding proteins [BR:
xco04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
114152404
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
114152404
NCBI-ProteinID:
XP_027886109
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All DBs
Position
10:13095203..13108606
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AA seq
289 aa
AA seq
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MSHRTRTSPIRAYDFLLKFLLVGDSDVGKGEILESLQDGASESPYGYNLGIDYKTTTILL
DGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPG
VPKILVGNRLHLAYKRQVTTEQAQVYAEKLGVTFFEVSPLCNFNITESFTELARIVLMRH
GMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPLTLKSHLKSFSMANGLNARMMHG
RSYSVTAAAAAHHSAAKRSGGTLLKKPKLIRPPPLSPTTQGCRNSCKIS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagccacagaaccagaaccagcccgatccgagcctacgacttcctgctgaagttccta
ctggtgggagacagcgacgtggggaagggggagatcctggagagcctgcaggacggagcg
tccgagtccccgtacgggtacaacctgggaatcgactacaagacgacgaccattctcctg
gacgggaggcgagtcaagctgcagctctgggacacatccggacagggtcggttctgcacc
atattcagatcctactccagaggagcgcagggagtaatcctggtgtacgacatcaccaac
cgctggtccttcgacgggatcgacaggtggatcaaagagatcgacgagcatgcaccggga
gtgcccaagatcctggtcgggaaccgcctccacctcgcctacaagcgtcaggtgactacg
gagcaggcgcaggtgtacgccgagaagctgggcgtcactttctttgaggtgagcccgctc
tgcaacttcaacatcaccgagtcgttcacagagctcgcccgcatcgtcctcatgaggcac
ggcatggagcgcctgtggaggcccaacaaagtgctgagtcttcaggacctctgctgccgc
tccattgtctcctgcacgcctgtccaccttgtggacaagctgcccctgcccctcaccctc
aagtcccacctcaagtccttttccatggccaacggtctcaacgctcgcatgatgcacgga
cgctcctactccgtcaccgccgccgccgccgctcaccacagcgctgccaagaggagtgga
gggacgcttcttaaaaagccaaaactgatccgaccaccgccgctcagcccgacaacgcag
ggctgcagaaacagctgcaaaatatcctaa
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