Xiphophorus couchianus (Monterrey platyfish): 114152422
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Entry
114152422 CDS
T05908
Symbol
cdhr1
Name
(RefSeq) cadherin-related family member 1 isoform X1
KO
K16501
cadherin-related family member 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xco04515
]
114152422 (cdhr1)
Cell adhesion molecules [BR:
xco04515
]
Cadherins
Cadherin related
114152422 (cdhr1)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Cadherin_2
BIV_Env
Motif
Other DBs
NCBI-GeneID:
114152422
NCBI-ProteinID:
XP_027886128
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Position
10:complement(3337985..3354137)
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AA seq
862 aa
AA seq
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MKKYKKTHAFMFLLLLHYSLGQSDYAPYFYDNGPSSISGNMALFSISEDTPVGTQIYILN
GTDPEGDPVRYGLTFEKGSTEYFRVEPKSGNVTLIQELDREKQDEISVIVSITDGRNKVV
ETVRVFVTDANDEPPEFHSLPFITDVPEDTVPGSSIYRVHAIDKDLGSGGSVSYYLQSSP
FAKFTIDGHSGILRVKPGETLDYETTPTHFVTVVAKDGGGKYKGRHQVLTSTATVTINVL
DAQDMPPTFVGTPYFGYIYEVSVPGSEIYTVSAKDGDQGNPNPIHYSIVNGSDGVFDINS
TSGCISLTTPPSLLKNELYEIKVKASEVGSNNQQLDYDVTTVTVRVVDLNNHPPTFYGEN
GPQSKFEVTMYEHPPAGEILRGFKITVNDSDQGANAKFKLRLVGPSRVLRVVPQTVLNEA
QVTIIVEDASGIDFEKGPTLSFKLLAVEIDTPERFSATADIVINLLDTNDNVPVFTSEYY
IARVPENSPGGSSVLSVTANDPDSGSWGEVKYTIYGSGSDLFAIHPSTGLIITQPWTSLD
AEMRSKYNFYVKAEDSEGKYSIAEVFVSVLDMNDHPPEFDEEFQEKTMIIGTPVKVQAVD
EDAESPNNVIEYSIMTADPDNAFDINANTGEIQLKPFIKSMEIVHNITKRKDCKWSLVVQ
ARDRGSPSFSTTAVVNIDITEATPLKGPMGAFLMKSRDNPLRALGIVTFIILVLVGVTVM
ISTVMYMRNSKSNRIMPVRRIIKKRPRDQQTWKFKIPVIKLSSPAEKFLISDPESNPLQE
TSSPRLKPPPPTAPCLPPPPPSSSRANERPRAVPTISGALASKGSKKAKPGRRKEGNISS
ALVSELKMKLEQKINENNQGYY
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatacaagaaaacgcatgcattcatgttcctcctgctacttcactacagtttg
gggcaatcagactatgctccatatttctatgacaacggtcctagcagcataagtgggaac
atggccttgttcagcatctctgaggatacacctgttggaacacagatatacatcctgaac
gggacagatccggagggggatcctgtacgatacggcctcacatttgaaaaaggctccact
gaatatttcagggtggagcctaaatcaggaaacgtgactctaattcaggagctggacaga
gagaaacaagatgaaatctcagtgattgtcagcataacagatggacgcaataaagttgtt
gagactgtgagagtgtttgtgacagacgccaatgatgagccaccagaatttcatagtctg
ccttttatcactgatgttccagaggacactgttccaggaagtagtatctacagagtccat
gctatagacaaggacttgggttcaggagggagtgtttcatattatctgcagagttcccca
tttgccaagttcactatagatggacacagcgggatcctcagagtaaaacctggtgagact
ttggattatgagaccacaccaacacattttgttacagtggtcgcaaaggatggaggtgga
aagtacaaagggaggcaccaggtgctgacctccacggctactgtaacaatcaatgttctt
gatgcccaagacatgcccccaacctttgtgggaaccccatactttggatacatctatgaa
gtctcagtccctgggtctgaaatatacacagtgtctgctaaagacggggatcaaggcaat
cccaaccctatccattattccattgtgaatggaagtgatggtgtttttgacataaatagc
accagtggatgcatttctctaacaactcctccatctctgctgaaaaatgagctctatgaa
ataaaagtaaaggcatctgaagtcggatccaacaaccagcagttagactacgatgttacc
acagtgactgtccgggtggtggatcttaataaccatcctcctacgttttatggagaaaat
ggaccccagagcaagtttgaggtcaccatgtatgaacatcctcctgctggagagatcctc
agaggctttaagatcacagtgaatgactctgatcagggggcaaacgctaaatttaaactg
agactggtgggacccagtagagttcttcgagttgttccccagacggtcctgaatgaagcg
caggtgaccatcattgtggaggacgcatctggtatagactttgaaaagggaccaacccta
tcttttaagctgctggcggtagagattgacacgcctgagcgtttcagtgcgacagccgac
atagtgatcaacctgctggacacaaatgacaacgtccctgttttcacatccgagtactac
atcgccagagtgcctgagaactcccctgggggctccagtgttctgtctgtcacagcaaat
gatccagactctggttcctggggtgaagtcaaatacacgatttatggatcaggatcagat
ttatttgccatccacccatcaacaggccttatcatcacacaaccctggaccagtctggac
gcagagatgaggtcaaaatacaacttctatgtcaaggcagaagattcagaaggcaagtac
agcatagctgaagtctttgtcagcgtccttgacatgaatgaccatcctccggagtttgat
gaggaatttcaagagaagaccatgatcattgggacacctgtcaaagttcaggccgtggat
gaggacgcagagtctcctaacaacgtcattgagtactccatcatgacagccgatcccgac
aacgcgtttgacattaatgcaaacacaggggagatccagctgaagcctttcatcaagtct
atggagattgtgcacaatatcaccaagcggaaggattgcaagtggtctctggtggtccag
gccagggaccggggatctccatcctttagcacaacagctgtggtcaacatcgatatcaca
gaggcgactcctctcaaggggccaatgggagcatttttaatgaaaagtagggacaatcct
ctgagagctttaggcattgtcacttttatcattctcgtacttgtaggagtgactgtaatg
atctctacagtcatgtacatgcgcaactcaaagtcaaacagaatcatgccagtccgacgc
atcattaagaagcgacccagggaccagcagacttggaaattcaagattcctgtcatcaag
ttgtccagcccagcagagaagtttctgatcagtgacccagaaagcaacccactgcaggaa
accagcagccccaggctgaagcctccacctcctactgctccctgtctgccccctccgcct
ccatctagctctcgggctaatgagcggccccgggcggtcccaaccatatctggtgcactg
gcctccaaaggttcaaagaaagcaaagcctggccgccgcaaagagggaaacatcagttct
gcgttggtgtctgagcttaaaatgaagctggagcagaagattaatgagaataaccaaggg
tattattaa
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