Xiphophorus couchianus (Monterrey platyfish): 114152452
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Entry
114152452 CDS
T05908
Symbol
rnf103
Name
(RefSeq) E3 ubiquitin-protein ligase RNF103 isoform X1
KO
K15695
E3 ubiquitin-protein ligase RNF103 [EC:
2.3.2.27
]
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
xco04121
]
114152452 (rnf103)
Enzymes [BR:
xco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114152452 (rnf103)
Ubiquitin system [BR:
xco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114152452 (rnf103)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_4
DUF8177
zf-RING_Vps41
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
114152452
NCBI-ProteinID:
XP_027886142
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All DBs
Position
11:85669..130825
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AA seq
714 aa
AA seq
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MWLKLFFLLLYFMVLFLLARIFETVVWYETGMFATQLVDPVTLSYNKLKTILECRGLGYT
GLAEKKDVSELVEKSGELTQGELYSAIKKAREQTEAGDSSTTTAFSGEMHFYELVEDTKD
GIWLVQVVAQDQEAVLSQTNWGKMVLKLSQFGIRTGTFNCSTDFRSCVKRGWQRSMIIMS
APQTSASKGKVMLKEYVGQYIETEHIFRWMTSHLARRIKTVRQSAQLVEEWHSDPAHPVK
MFLFTHLSQPPAFFSSLSVKFTGRIEFIFVDVRHWDNRSTLLDIGVTQSPSYILKMPEGI
YHYGNSTGEFLSLAAMDTFLRSVQPEVNDLFVLSLVLINLLAWMDFFITQGATIKRFVVL
IRTLGTYNSILLVSWLPVLALIQLPYLDKLYCYSLKLIRYADTTTFASLVRADWTFYSSH
PALFLSTYLAHGLLIDYFERKRHCGTRNQENSTTNLEWLASLWDWYTSFLLHPITLVQQF
PSDLSEWEDDPSFLFERLAFPDLWLHPLVNVDYLKSLPTWKVKTVLHQCQSVSCLHQDDK
QDRLPSNINCQELTDSSPPSINTLPHSSLSQIGSLCNQDNRLNILCRDQDANSSQFVKSV
SLYPSCYGYRNKSFQKVDRFPEDGSIIPVGVSVTQVNWSGWPNDMLPCSECVVCLENFVN
EELLMGLPCGHAFHQQCIVVWLAGGKHWCPLCRWPSYKKKNIIVALSTITENTM
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgtggttaaaacttttctttttactcctgtatttcatggtgttgtttttgcttgctaga
atttttgagactgtagtctggtatgagactggtatgttcgccacgcagcttgtagatcca
gttactcttagttacaataagttgaaaaccatcttagagtgcagaggactgggatacacc
ggcctggctgagaaaaaggatgtcagcgaactggtggaaaaatcaggagaattaacgcaa
ggggagctgtattcagccatcaagaaagcgagagagcagacggaggctggagattccagc
actactacagcattcagtggggagatgcacttctatgaattggtggaggacactaaagat
ggaatttggctggttcaggttgtagcccaggaccaggaagctgtgctcagtcaaacgaac
tggggaaaaatggtgctgaagctgtctcagtttggaatcagaactggaaccttcaactgc
tccactgactttaggtcatgtgtcaaacgtggttggcaacgctcaatgatcatcatgtct
gctcctcaaacttcagcttcaaagggtaaagtgatgctaaaagaatatgttggacagtac
attgaaactgaacacatctttcggtggatgacctcccacctggctcgtcgaatcaaaact
gtacgtcagtctgcacaactagttgaggagtggcactctgacccagctcatccagtcaag
atgtttctgttcacccatctgtcccaacctcctgccttcttctcctcgctgtctgttaag
ttcactggcagaatcgagtttatttttgtggatgtacgtcactgggacaaccggagcacc
ctcttagatattggtgtgacacagagcccttcttacatacttaagatgccagagggtatc
tatcactatggtaacagtactggggagtttctgtctcttgctgccatggatacattcctg
cgttcagtccagccagaagtcaatgacctgtttgtcctcagcctggtactcataaatttg
ctggcctggatggacttcttcattacacagggagcaacaatcaagcgatttgttgttctg
atcagaacacttggaacctacaactccatattgctggtgtcttggcttcctgttttggct
ctcattcaactcccctatctggacaaactgtattgttacagtctgaagttgattcgttat
gcagacaccaccacattcgcaagcttagttagggctgactggaccttttactcatcccat
ccagctctctttctgtccacctacctggctcatggcctgttgattgactattttgagagg
aaacgccattgtggtacaaggaaccaagagaactccacaaccaacctcgagtggctagcc
agtctgtgggactggtacacctcctttctgcttcaccctattacattagtgcaacagttc
ccgtctgatctttcagagtgggaagatgaccccagctttttatttgagcgtttggctttc
ccagatctctggcttcacccactagtaaatgtagactacttaaaatctcttccaacctgg
aaggttaaaactgttctccatcaatgccagtctgtgtcttgtttacatcaagatgataaa
caggatagactgccatcaaacataaactgccaagaactgacagattcctcacctccaagc
ataaacacacttccacacagtagtttaagccaaataggatctttgtgcaatcaggacaac
aggctcaatattttgtgcagggaccaagatgccaacagtagtcaatttgtaaagtctgtt
tctctttacccatcttgctatggctacagaaataaaagcttccaaaaagttgacagattt
cctgaggatggtagcatcattcctgtaggagtttctgttactcaggtaaattggtctggg
tggcccaatgacatgcttccttgttcagagtgtgtggtgtgccttgagaactttgtgaat
gaggagctgctcatgggcctgccctgtggccatgccttccaccagcagtgcattgtggta
tggttagcaggaggtaagcactggtgcccactatgtcgctggcccagctacaagaagaaa
aacattatagttgcactaagcaccatcactgaaaacacaatgtag
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