Xiphophorus couchianus (Monterrey platyfish): 114152514
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Entry
114152514 CDS
T05908
Symbol
lrwd1
Name
(RefSeq) leucine-rich repeat and WD repeat-containing protein 1
KO
K24733
leucine-rich repeat and WD repeat-containing protein 1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xco04990
]
114152514 (lrwd1)
Domain-containing proteins not elsewhere classified [BR:
xco04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
114152514 (lrwd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD_LRWD1
LRR_LRWD1
LRR_4
LRR_8
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
LRR_14
LRR_9
Beta-prop_RIG_2nd
LRR_Zer-1
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
114152514
NCBI-ProteinID:
XP_027886223
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Position
11:complement(13470924..13482471)
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AA seq
738 aa
AA seq
DB search
MEKITEKLLLEKGSPKTNKLEQIETLNLSKMALKLEDLPVKLLSRLRSLERWDLSGNRLQ
EFPKCLELPALRYLDLSDNQMEDVTTLKSLRALEELKMDDNLYITVSDNYKLFVLLPNLR
IYNSKDVTATANRLRYVYSDNLRTRMIAVWERSFSLPDPVSAEKLSSLEENFVSAARKQV
KFGPSSVADFTKWRVEILAKEYLRSLAEPKEDSDDEAQTENNDDTDVSTPPKRKQVDAAA
DAFISLTPRKKLRADLPESPAESSPRKSSLRLKPLTGTQSRMSPQKPNHCPSTPNKAETR
AETPRRRAKVKQVKEAEQKENLSREEAKAAKPHRNVHVLPIIKACNKTKPVSLKPLHALQ
CHSKQDSSDDFSTQLWACAFQPQSESSAGSRLVATCGGDSVCVIDCETGKVMKKYKVPGE
EFFSLAWTTVLMSRGGSAPSQPCSVLAAGGKRGLVKLIHPRNNMAYGEFRASRKSLSVLR
FSHRQGNFLFTGSYDNKIIMWDIGGVDKHFNFKVVQLLTLEVGTTPLHICLPPSSPDTHL
LTACEDGLLCYNTQLGANSTTKRSNKMEITFPVYKMEDKQHNYHTIDGLSFLTDDVVASK
SHTHGSIYLWSWSGTRSQRPDKRSGSVCAVVLAELQWAVTDVPYLSLNTCPGRAYIVCGD
NKGRIWTYHVTNLQKNSGQIGKTIPPTEVLEWPTPVRKGLGRMEGPSINSVAMDPELHYL
VALTDKNLAVIWKSEALS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaattacagagaagcttctattggagaaagggtctccaaaaaccaacaagttg
gaacagatcgaaactctgaatctgtctaagatggcgctgaagcttgaggatcttcctgtg
aagctgctgtcacgcctgaggtcgctggagcgttgggatctgtctggaaacaggctgcaa
gagttccctaagtgtttggagctgcctgcgctccggtacctggacctgagcgataaccag
atggaggacgtcaccaccctgaagtccctcagggctctggaagagctcaagatggacgac
aacctttatatcactgtgagtgataattacaagctgtttgtgttgctgcccaatctgcgg
atttacaacagcaaggatgtcactgccactgccaaccgtttgagatacgtttacagcgac
aacctgaggaccaggatgattgctgtttgggagaggagcttcagtctcccggatcccgtc
tctgctgagaagctgtcttccctcgaagagaactttgtgagcgccgctcgtaagcaagtt
aaattcggccccagttctgtggctgatttcaccaaatggagggtggaaattctggctaag
gagtatctgcgctctctggcggaaccgaaggaggactcggacgatgaagctcaaactgag
aacaacgacgacaccgatgtatctacaccccctaagaggaaacaggtggacgcagcagca
gacgccttcatcagcctgacaccccgcaaaaagctgcgtgccgacctccctgaatcaccc
gctgaaagcagtcctcgcaaatccagcctccgcctcaaaccactgacaggcacccagagc
aggatgagtccccagaagccgaaccattgtccctcaacccccaacaaggcagagacgagg
gcagagacgcccaggagaagagccaaggtcaaacaggtcaaagaggcggagcagaaagaa
aacctgagcagagaggaagcaaaggctgcaaagccgcacagaaacgttcatgtgctgccc
atcataaaggcttgcaacaaaacaaagccagtctctctgaagccactacatgctctgcag
tgccacagtaagcaggacagctcagacgacttctccacccagctgtgggcctgcgccttc
cagccgcagtcagagtccagtgcaggcagccgattggtggcaacatgtggaggagactcg
gtctgcgtgatcgactgtgaaacggggaaggtgatgaagaagtacaaagttccaggagag
gagttcttctccctggcctggaccactgtgttgatgtccagaggtggcagcgctccgtct
cagccctgcagtgtcctcgccgctggcggaaagagaggactcgtcaagctgatccacccc
aggaacaacatggcgtacggcgagttcagagccagccggaagtcgctgtcggtgctccgc
ttcagccaccggcaggggaacttcctcttcaccggctcctacgacaacaaaataatcatg
tgggatatcggaggagtggacaagcatttcaacttcaaagttgttcagctgctgacgttg
gaggtcggcaccactcctctgcacatctgcctgcccccgtcctcccccgacacacacctg
ctgacggcctgcgaggacggcctgctctgctacaacacacagctgggagccaacagcacc
acgaagaggtcaaacaaaatggaaataactttccccgtttataagatggaggacaaacaa
cacaactaccacactatcgatgggttgagttttctcactgatgatgtagtggcctctaag
agccacacccacgggtccatttacctgtggagctggagtggcaccaggagtcagcggccg
gacaagaggagcgggtcggtgtgcgccgtggttttggctgagctgcagtgggccgtcacc
gacgttccgtacctgtctctgaacacctgcccaggacgggcctacatagtttgtggtgac
aacaagggacgaatatggacttatcacgtcaccaacctccagaagaacagcggtcagata
gggaaaaccattccacccactgaggtgctagaatggccgaccccggtgaggaaaggcctg
ggccggatggagggcccgtccatcaacagtgtggcgatggacccagagcttcattacctg
gtggcgctcactgataagaacttggcggtcatatggaagagtgaggcgttgtcctga
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