Xiphophorus couchianus (Monterrey platyfish): 114152595
Help
Entry
114152595 CDS
T05908
Symbol
uimc1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114152595 (uimc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xco03400
]
114152595 (uimc1)
DNA repair and recombination proteins [BR:
xco03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
114152595 (uimc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
Motif
Other DBs
NCBI-GeneID:
114152595
NCBI-ProteinID:
XP_027886329
LinkDB
All DBs
Position
11:8444346..8457856
Genome browser
AA seq
989 aa
AA seq
DB search
MRGRGRHSSSPSSATQQQSRMALRKKLAQNVSSDSQQDENTQEDIASTDTESRDEFSSLL
RSTSLAREKRRRERKNHSRRKEMTEDEEMDLALQLSKQEASNTALRQQQEDENVMKAIQE
SMVNQTQPGLKSPNKHLLDGVPQSTGSRRKLSYSNGERMPEEGGMNSGAVGPGDEIITRR
KKRRKQAGSPLMGIPELSQTQKVSSENSPSITEPVSAHLDSPQSSDSTDIEDSQLQMSPV
FPLTGCRADVHVSRLNLDVVEACKSSGFVLYSQDSLISTQKSAQPRSPVFPQSNPIFCPK
SPVFPGDDMGRERHLEQSPTFVKSPVFGRTADCSNHPACENTELSFSSQESSNPTVRSGS
PQSPVFHKSPSGQSSFCKDPRRGQVERRDERSTSPAELQRTDQQLRASDRDQSPSGCRKD
IKSGGCPTAECNRHSPKSEEVNENCEGWTSAETELTSDMTLIWSEQEEDDITPVGSLSPV
FPEEKAAVPADNQLGSSPNHVLTASQEPSGPDCSLKPQKCSSQPPTSALHPVSRQEEVRR
ASPQRGEPSDRQTIHYYWGVPFCPRGLDPDTYTKVIMAQMEVYEKSLKEAQRGLLRKAEW
GEAIQSEPQNSISPEASAGSPQPCVSRRRGLRLRGSKRSEVADFLPEEEEERKDEGEEEQ
QEEEGNKESDEVQMDTDDCEVCPETQLSDNNSTKDLSLGADAETQVSPLLEPSQKDPELP
EIKMILRDDSPIRDESQEPEPNMKNSKIEGNVSGPGEDAGGQTARRVKKVKSRKNPEVEK
MEDRSLQRSECLELEASIIPHSPEASVDCPICQGSFPVNEIEMHAAYCDGEVAMVDQRRP
ESQGFLDLLKPRRKRMKRTEVVSEETTQPSDICRNQEKCYICQKSVPLRDYSRHTELCLQ
RGTVSRRGSLLSALEKTESRDSGAGTSGAKPQPEAVIDLRDDDEEDEEVSAYRISNSPIR
SFTPISEATGCLIDFRKQQRPKKPSQKRR
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgagaggaagaggaagacactcttcatcaccgtcgtcagcgacacagcagcagagcagg
atggctctgaggaagaagctggctcagaacgtttcctctgatagccaacaggatgaaaac
acccaggaggacatagcttctaccgacacagaaagcagggatgagttctcgtctttgctt
cggtcaacatcattagcacgagagaaacgccgaagggagaggaagaaccactccagacga
aaagagatgactgaggatgaggagatggacctggcgctacaactcagcaaacaggaagcc
agcaacacagcactgagacagcagcaggaggatgagaatgtgatgaaggccattcaggag
agcatggtcaaccagacacaacctggtctgaagtctccaaataaacatctgcttgatggc
gtcccccagagcaccggctctcgacgaaaactctcatactctaacggggagaggatgcca
gaggagggtggcatgaactcaggagctgttggaccaggagatgaaattattaccaggaga
aagaagcggagaaaacaagctggcagtcctctaatgggaataccagaattgtcacagact
cagaaagtttcctctgagaattctcccagtatcacagaaccggtctccgctcatctggac
tctccgcagagctccgactcaacggatattgaagactcccagctccagatgtctccagtc
ttcccgctgaccggctgcagagcggatgttcatgtcagtcgcctcaacctggatgtagtg
gaagcctgcaagagctctgggtttgtcttgtattctcaggacagtttgatttccactcaa
aaatctgctcagcccagaagccccgtgttcccccagagtaaccccatattctgtcccaaa
agtcctgtgttcccaggagatgacatgggccgtgaaagacacctggagcagagccccaca
tttgttaagagtccagtttttggcaggactgctgactgctctaatcatcctgcctgtgaa
aatacagagctcagcttctcctctcaggagagttcaaatcccactgtgaggtctggctcc
ccccagagccctgtgttccataaaagcccctcaggacagtcttcattctgtaaagatccc
cgccgagggcaggtggagcggagagatgagcggtcaacaagccccgctgaactgcaaagg
accgaccagcagctccgagcttctgaccgtgaccagagtccttctggctgcaggaaggac
ataaagtctggcggctgtccaactgccgagtgcaacagacattcgccgaagtcagaagag
gtgaatgaaaactgcgaaggctggacttctgcagagacggagctgacaagcgacatgacg
ctgatctggtcagaacaggaggaagatgatattacgcctgttggttctctcagcccagtc
ttccctgaggagaaagctgctgttccagcagacaatcagttgggatcatccccgaatcat
gtattgacggcttcccaagaaccgtccgggccagactgcagcctgaaaccccagaaatgt
tcgtcacagccacccacctcggccttgcatcctgtgagcagacaggaggaggtccgcagg
gcgtcgccccagcgtggggagccttcagacagacagaccatccactactactggggggtt
cccttctgtccaagaggcctggacccagacacgtacaccaaggtgatcatggctcagatg
gaggtttatgagaagagtctgaaagaggctcaaaggggtctgctgaggaaggctgagtgg
ggggaggccatccagtcggagccacagaattccatatcccctgaagcatcagctggatca
cctcagccttgtgtttctcgaaggagaggtctaagactgagaggcagcaaaaggagcgaa
gttgctgattttcttccagaagaggaagaggagagaaaagatgaaggagaagaggagcag
caagaggaagaggggaacaaggagagtgatgaagtgcagatggacactgatgactgtgag
gtttgtccagaaactcaactgagtgacaacaacagcacaaaagacctgagcttgggtgct
gatgcggaaacacaggtcagccccctgctagaaccttcacagaaagatcctgagctgcct
gagatcaagatgatcctcagagatgattctccgatcagagacgagtctcaggagccagaa
ccaaatatgaaaaactcaaaaatagagggaaacgtctcaggtcccggcgaagatgccgga
ggacagactgcacgaagggtaaagaaagtcaagagcagaaagaatccagaggtggagaag
atggaggaccgaagtcttcagagatcagaatgtcttgaactggaagcatccatcatccct
cacagccctgaagcctctgtcgactgtcccatctgtcagggatcgtttcccgtgaatgag
attgagatgcatgcggcgtactgtgatggagaggtggccatggtcgaccagaggaggcct
gaaagtcaaggttttctagatttactgaaacctcgtaggaagagaatgaagagaacagag
gtggtatcggaggaaaccacccaaccctctgatatttgcaggaaccaggagaaatgctac
atctgtcagaaatctgttcctctaagagattacagccgacatacagagctctgccttcag
cgtgggacagtgagcaggaggggaagtctgttgtcggctctggagaaaacagaaagcaga
gactcaggtgctggaacatcaggagccaaaccccaacctgaagcagttatcgatctgcgg
gacgatgatgaggaggatgaggaggtttcagcgtacagaatcagtaactctcccatcaga
tccttcactcccatctctgaggccacaggatgccttattgacttcaggaaacagcagcga
cccaagaagccgagtcaaaaacgaagatga
DBGET
integrated database retrieval system
