Xiphophorus couchianus (Monterrey platyfish): 114152688
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Entry
114152688 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-4-like
KO
K05192
gamma-aminobutyric acid receptor subunit theta
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114152688
04082 Neuroactive ligand signaling
114152688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114152688
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114152688
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
114152688
NCBI-ProteinID:
XP_027886436
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Position
11:complement(22809168..22873304)
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AA seq
512 aa
AA seq
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MLGRQEEKICGIFSGLVALSFLCFVQSSSNESTGMSVAKTTVDKLLKGYDIRLRPDFGGP
PVIVGMSINIASIDSISEVNMDYTITMYFQQSWRDKRLAYGELKLNLTLDNRVADQLWLP
DTYFLNDKKSFLHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEI
ESYGYTTDDIVFFWEGDDKAVTGVKELELPQFSIVDVRLVSREVRFTTGSYPRLSLSFRI
KRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGVTTVLTMTTINTHLRETLPK
IPYVKAIDVYLMGCFVFVFLALLEYAFVNYVFFGRGPAQQKKINERLGKVNNERTRYEEK
RLREQDSISVPFQTNTFRSFTQRRNLYLEEQRKVGVDAYGNILLTTLDMNNEVMPSDVGS
SVSDSRNSVMSFDSSGVQFRKPMAPRDGYGHHSLDRSAMRSRANCRLRRRSSKLKLKIPN
LSDVSTIDKWSRVIFPITFGFFNLIYWLYYVN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttgggtcgtcaagaagaaaaaatatgtggaattttctctggtttggtggctttgtcc
ttcctatgctttgttcaaagctcctccaacgaaagcaccggaatgtctgtggccaagact
accgtggacaagttgctgaagggatatgatatccgtctgaggcctgattttggaggtcct
ccagtcatcgtagggatgagcatcaacatagccagtatcgactccatctcagaagtaaac
atggactacaccatcacaatgtatttccagcaaagctggagagacaagcgtttggcctac
ggagagctgaaactaaacctgactttggacaaccgtgtagcagaccagctgtggctccct
gatacttacttccttaatgacaagaaatcctttcttcatggagtgacggtgaaaaaccga
atgatccgactgcaccctgatggcaccgtcctatacggactaagaataacaactactgct
gcctgcatgatggacttgaggagataccctctggatgaacagaactgcactctcgaaatt
gaaagctatggatatacaacagatgacatcgtatttttttgggaaggagatgacaaagct
gtgaccggggttaaagagttggaattacctcagttctccattgtggatgtccgcctggtg
tccagggaggtcaggtttactacaggttcatatccaaggctctcattgagtttcaggatt
aagaggaacataggctatttcatcttgcagacgtatatgccctccatcttgatcaccatc
ctctcctgggtctccttctggatcaattatgatgcctctgcagctcgcgtggccctcggt
gtgacaacggtgcttaccatgaccacgattaacacccaccttagggagaccctcccaaag
attccttacgtgaaagccatcgacgtctacctcatgggctgttttgtgttcgtgtttctg
gccctgcttgaatatgcctttgtaaattacgtgttctttggccggggccctgcgcaacag
aagaaaatcaatgagaggctgggcaaagtcaacaacgagcgtacgagatatgaagagaag
cgcctgagggaacaggactccatttccgtgccgtttcaaaccaacaccttcaggtcattt
acacagcgaagaaatctgtatctcgaggaacaaagaaaagttggggtggacgcttacggg
aacatcctcctcaccacgctggacatgaacaacgaggtgatgccttccgacgtggggagc
agcgtcagtgactctcggaattccgtcatgtcctttgacagctccggcgtccagtttagg
aagcccatggcgccccgggatggctacggccaccactcgctggaccggagcgccatgcgg
agccgcgccaactgtcggctacggcggcgctcttccaagctcaagttgaaaatcccaaac
ctgtcagatgttagcaccatcgacaagtggtcccgggtcattttccccatcacctttgga
tttttcaacctaatctactggttgtactatgtgaattga
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