Xiphophorus couchianus (Monterrey platyfish): 114152689
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Entry
114152689 CDS
T05908
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like isoform X1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114152689
04082 Neuroactive ligand signaling
114152689
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114152689
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114152689
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
114152689
NCBI-ProteinID:
XP_027886437
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Position
11:22938902..23062917
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AA seq
481 aa
AA seq
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MAALQWKAKSPQQNLWIFLLSLSLLPEASRAVVGHREPLPDDSKDNITIFTRILDRLLDG
YDNRLRPGLGESVTEVRTNIYVTSFGPVSDTDMEYTIDVFFRQSWRDERLKFDGPMQVLP
LNNLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLED
FPMDAHACPLKFGSYAYTNNEVIYLWTQGDERSVSVAEDGSRLNQYDLLGHVIGKETISS
STGEYVVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLT
MTTLSISARNSLPKVAYATAMDWFMAVCYAFVFSALIEFATVNYFTKRSWAWDGKREGME
IREPFQANMARIKDMRRESATLTKKANNTFNIVGTTYGINVAKDQGLTTISKSAPGPSIK
HSFLHKMDDPYTEAKKSYNRVSKVDKISRIIFPVLFFIFNLGYWATYVNRKPAIMKANNL
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctgccctacagtggaaggctaaatcgccacagcagaacttgtggatcttcctcctt
tccctaagccttcttcctgaagccagcagggcagtcgttggacacagagagccgctgcct
gatgacagcaaagacaacattaccattttcacccggatcctcgacaggctgttggatgga
tacgacaacaggctacgtcctgggctcggagagagcgtgacagaagtgaggacaaacatc
tatgtgacgagttttgggccggtgtcggacacagacatggagtataccattgatgtcttc
ttccgtcaaagctggagggacgagaggcttaagttcgacggtccaatgcaagttttgccg
cttaacaacctactggccagtaagatctggacgcccgataccttctttcacaacgggaag
aaatctgtggcccacaacatgacaactccaaacaaactactacgactagttgacaacggc
acgcttctctatacaatgaggttgaccatccatgcagagtgccccatgcacctggaggac
ttcccgatggatgcacacgcctgtcctttgaagtttggaagttatgcgtacaccaacaat
gaggtgatctacctgtggactcagggagacgagagatctgtctcggtggcagaggacggc
tcaaggctcaaccagtatgacttactgggtcacgtcattggcaaagaaaccatcagctcc
agcacaggagaatacgtagtgatgacgacatatttccatttgaaaaggaaaattggctat
tttgtgattcaaacctaccttccgtgcatcatgacagtcatactgtctcaggtctccttc
tggcttaacagggaatcggttcctgcccgcactgtgtttggggtcaccacggtcctaacc
atgaccactctgagcatcagtgctagaaactccctccctaaggtggcctatgccactgcc
atggactggttcatggcagtgtgctatgcctttgtcttctctgccctgatagagtttgcg
acagtcaactacttcaccaaacgcagctgggcgtgggatgggaaaagagagggcatggaa
ataagggaaccgtttcaggctaacatggccaggattaaagatatgagaagagagtcggcc
acgctgactaaaaaggccaacaacaccttcaacattgtcggcaccacctacggcatcaac
gtagccaaagaccaaggcttaacgaccatttccaaaagcgccccgggaccgtcgatcaaa
cactcctttctgcacaaaatggacgacccctacacagaggccaagaagtcctacaaccgc
gtcagcaaagtggacaagatatcgcgcatcatcttcccagtgctgttcttcattttcaac
ttaggctactgggccacgtatgtcaacagaaagcccgcgatcatgaaggcaaacaaccta
aactga
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