Xiphophorus couchianus (Monterrey platyfish): 114152766
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Entry
114152766 CDS
T05908
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco04080
Neuroactive ligand-receptor interaction
xco04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
114152766 (gabra1)
04082 Neuroactive ligand signaling
114152766 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xco04040
]
114152766 (gabra1)
Ion channels [BR:
xco04040
]
Ligand-gated channels
GABA-A
114152766 (gabra1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
114152766
NCBI-ProteinID:
XP_027886560
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Position
11:complement(3839929..3866348)
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AA seq
461 aa
AA seq
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MCGQSRVASLCLWTCLLVTSSVLTGKSSGQNGMTDEQKDNTTVFTKILDSLLDGYDNRLR
PGLGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMA
SKIWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAH
ACPLKFGSYAYTRAEVVYVWTRGAAQSVVVAEDGSRLNQYDLMGQSVDSGVVQSSTGEYV
VMTTHFLLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSI
SARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKK
ESLLKKNNTTAYPPTTSTPFAPNPARNPGLATIAKSAPPPPDEPKEEPKPKPPEAKKTFN
SVSKIDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGVNHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggacagagcagggtggcctctctgtgtctgtggacttgtttactggtcacaagc
agcgtactgactgggaaaagctctgggcagaatggcatgacagacgagcagaaagataac
accacagtgttcaccaaaatcttagacagccttctagatggctatgacaatcgcctcagg
ccaggactcggagagcgtgtaactgaagtcaagactgacatttttgtgactagtattgga
ccagtttcggaccatgacatggagtacaccattgatgtttttttcagacagagctggaaa
gatgaaaggttaaagttcaaagggcccatggccgtgttgcgtctcaacaacctgatggcc
agcaagatctggaccccagatactttcttccacaatggcaagaagtcagtggcccacaac
atgaccatgccgaacaagcttctacgaattacagaggaaggcaccctgctttacaccatg
aggcttacagtgagagcagaatgccctatgcatctggaagacttccctatggatgcccat
gcttgtcccctgaaatttggcagctatgcctataccagagcagaggtggtgtatgtgtgg
accagaggggctgctcagtctgtagtggtggcagaggacggctccaggttaaaccagtat
gatctgatggggcagagtgtggattctggtgtggtgcaatcaagcacaggagagtatgtt
gtgatgacaacccacttcctcctgaagaggaaaattggttactttgtgatccagacatat
ctaccctgcatcatgacagtgatcctctcccaagtgtccttctggctcaacagagagtct
gtccctgccagaactgtctttggagtgaccactgtcctgaccatgactactctcagtata
agcgccaggaactctctccctaaagtggcctacgccacagctatggactggttcatcgcc
gtctgctacgccttcgtcttctctgccctcattgaatttgccacagtcaactacttcacc
aagagaggttatgcttgggatggaaaaagtgtagtccctgagaagcaaaagaagaagaaa
gagtctctcctgaagaaaaacaacacaacggcctacccgcctaccacttctacacccttc
gcacccaatcctgccaggaacccgggattagccacaatcgccaaaagcgctcctccaccc
ccagacgagcccaaagaggagccgaagcccaaaccccctgaggccaagaagacctttaac
agtgtgagcaagatagaccggattgccagaatagccttccccctgctctttggaaccttt
aacttggtctactgggcaacctacttgaataagaagcccaaattgcagggggtcaatcac
acctaa
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