Xiphophorus couchianus (Monterrey platyfish): 114152767
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Entry
114152767 CDS
T05908
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xco03021
]
114152767 (supt6h)
03036 Chromosome and associated proteins [BR:
xco03036
]
114152767 (supt6h)
Transcription machinery [BR:
xco03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
114152767 (supt6h)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
114152767 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
SPT6_acidic
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
DUF7798
Motif
Other DBs
NCBI-GeneID:
114152767
NCBI-ProteinID:
XP_027886562
LinkDB
All DBs
Position
11:complement(30056113..30071458)
Genome browser
AA seq
1752 aa
AA seq
DB search
MSDFIDSEAEESEEEFEESDLKPKKTQRFLEEDDEEEDVENPEEQDEHGNLRGLIDDDDD
EEGEGEEEAEKSNSGGGSDSEEEVKHWRKKRTYDDCLDDDDLDLIEENLGVKVKRRKKKY
DRVKMLDDDEDDDEKDLIADEIFHVDGEGELEDGEAVDEPIQQADEEEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADAYDQGEEEEEDQDEEG
WDRPKKQTKRRQGRKSIFELYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDE
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQKMQSFQFEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELSDVYNHFLLYYGRDIPKMQNAAKSKKKKLKKI
KEVSEDGEEEEYEVEEEEEQKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPLELAKDYICSQFSTPEAVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINTKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGDQFLKMCLAEDEGLLSIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALNQFLYPQMAKELK
SKLIAEAKESIVKSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGDGEVVDFLRLPYFMKRRNAFREDEREKKAHDVENLKRFLSSKKPHVVAV
AGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELAMLYMNSKKSENDFRDYPPLL
RQAVSVARKIQDPLIEYAQVCSTDEDILCLKLHPLQEHVVKEDLLNALYCEFINRVNEVG
VDVNRAIAHPHTQSLVQYVCGLGPRKGAHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVF
NLLTKETPETFYIGKLITSVVTGIAHRRPQGESYDQAIRNDATGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKNNEWKLPKDSYYDFDTEAEDQKLDEEFKKKQQRTPYIKRVI
AHPNFHNISFSQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINTEEFEDLDEITARYIQPMASFARDLLGHKYFQDCSGGSKEKMEELLIRT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEYVTITPDGFRYRSQIFPTVNGLFRW
FKDHYQEPVPGITPTNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQNQNPNATPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPS
QQPLGTPQYPGSTPQSSHVHAHPHLPHPSHHGAPSSHHGHASGTPSSSSSSRRGTPQQQQ
PTPPQPKPSSSASSSTAVDWGKMAEQWLKEKEAEDRKKTQRMTPRPSPSPMIESTPMSLA
GDATPLLDEMDR
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttcattgatagcgaggctgaggaatcagaggaggagtttgaagagagcgac
ctgaaacctaagaagacccagaggttcttggaggaagatgacgaagaagaggatgttgag
aacccagaggagcaggatgagcacggaaatttacgtggactaattgacgacgatgatgat
gaggagggagagggagaagaagaggctgagaaaagcaacagtggtggaggaagcgactca
gaggaggaagtaaaacattggcggaaaaagcggacttatgatgactgcctggatgacgat
gatcttgacttgattgaggaaaatctgggtgtcaaagtgaaaaggaggaagaagaaatac
gaccgcgttaaaatgctggatgacgatgaggatgatgacgagaaagacttgatcgcggat
gagatttttcacgttgacggtgagggagagctggaggacggcgaagctgtcgacgaacca
attcaacaagcagatgaggaagaagagggggaagatgaagagtcagatatagatgatttt
attgtggatgatgacggacagcccatcaccaagaagaggggaaagaagttctcaggatac
acagacgcagccctgcaggaggcccaggagatttttggtggagactttgactttgccgac
tttgacgcagacgcctatgaccagggcgaagaggaagaggaggatcaagatgaagagggc
tgggaccggcccaagaagcagaccaagaggaggcaggggaggaagagcatctttgagctg
tatgagcccagcgagctggaaagcagtcacatgaccgatcaggacaacgagatccgctcc
actgacatgccagagagattccagttgcgttcaatccctgttaaacctgctgaggatgag
gagttggaggaagaagcagagtggatcttcagacacgggttctccactctgaccatctcc
atgcaggaaagcaccgactatcttgatagaggaacgacaacaaacttcagcaggaaagga
cccagcaccattgccaaaatcaaagaagccctgaacttcatgagaaatcaacagtttgag
gttccattcatagctttctacagaaaggaatatgtagagccagagctgaacatcaacgac
ctgtggaaggtgtggcagtgggatgaaaagtggacgcagctgaaaacccggaaacagaac
ttgacccgtctgttccagaagatgcagtccttccagtttgagcagatatctgcagacccg
gacaaaccgctggctgacggcatccgtcctctggacacagccgacatggagaggctgaag
gacgtgcagactcttgaagagctgagcgatgtttacaatcactttttgctctactacggc
cgagacatcccgaagatgcagaacgcggcaaaatccaagaagaagaagctcaagaaaatc
aaagaagtctcagaagatggagaggaagaggagtatgaggttgaagaggaggaggagcag
aaaggtcctgacctgaagctggcgtctcgtagggatatgtacagcatctgtcaaagtgtt
ggactcgacggcctggctaaaaagttcggattgaccccagagcagttcggagagaatctg
cgagacagctaccaacgccacgagacggagcagttccccgccgagccgctagagctggcc
aaagattacatctgcagtcagttctcgactcctgaggcggtgttggaagggacccggtac
atggtggccatgcagattgcccgagagccgctggtcaggcacgtcctccgtcagactttc
caggagagagccaagatcaacaccaaacctacaaagaaaggcaaaaaggaggtagatgaa
gctcattttgcatattcctttaaatatctgaagaataaacctgtgaaagagctgaatggg
gatcagttcctgaagatgtgcctggcagaggacgagggtcttctttccattgatatctgc
atagatctaataggggtcaaagggtatgctggagaccagacctactttgatgagatcaag
cagttttactacagggacgagttcagccaccaggtgcaggagtggaacaggcagcgaact
ctcgccatagagagagctctcaaccagttcctttacccccagatggccaaggagctcaag
agcaaactgattgctgaggctaaagagagcatcgtcaagtcctgctgccgccggttgtat
aactggctgaaggtggctccttaccggcccgaccagcaggtggaggaagatgatgacctg
atggatgagagccaggggaaaggcatccgtgtgctgggtgtggcctatgctcccagcaga
gacacaccagttttctgtgctttgatcaacggggatggagaggtggtggacttccttcgc
ttgccgtacttcatgaagaggaggaatgccttcagggaggatgagagagagaaaaaggct
catgacgttgaaaatctgaagagatttctttccagcaagaaacctcatgtggtggctgtt
gctggggagaatcgagatgctcagatgatcatggaggacatcaagaggaccatcagtgag
ctggagcaggagtcttccctgccggccgtcggagtggagctggtggacaacgaactggcc
atgctgtacatgaacagcaagaagtcagagaatgatttcagggattaccctcccttgctg
cgacaagccgtctccgtcgccaggaagatccaggatcctctgatagaatacgctcaggtc
tgcagcactgatgaagacattctctgcctcaagttacacccactgcaggaacatgtggtg
aaggaggatttgcttaacgctctctactgtgaattcatcaaccgggtcaacgaggtcggt
gtggatgtgaaccgagcgattgcccatccccacactcagagtctggtccagtatgtctgc
ggtctgggaccaaggaagggagcccacctcctcaagatcttaaagcagaacaacactcgt
ctggagaacagaacgcagctggttacgatgtgccacatgggacccaaagttttcatcaac
tgcgctggtttcatcaagatcgacacggcatcacttggcgacagtacggactcctacata
gaagtgctggacggttctcgggtccaccctgagacgtacgagtgggctcgcaagatggcc
gtcgatgcccttgagtacgacgagtctgcagaagatgcaaacccagccggagctctggag
gagatcctagaaaacccggaacgccttaaggatctggacctggacgccttcgctgaggag
ctggagagacagggctacggcaacaagggaatcacactttatgacatccgagcagagctg
agctgcaggtacaaagaccttcgggttccttacagagttcccaacacagaggaggtcttc
aatctgctcaccaaggaaaccccagagaccttttatatcggtaagctaataacgagtgta
gtgaccggtatagctcaccggcggccccagggagagagctacgaccaggccattcggaac
gacgctacaggcctgtggcagtgtcccttctgccagcaggacaatttccccgagctgagt
gaggtgtggaatcactttgacagcggctcctgtcccggtcaggccatcggtgttcggagc
aggttagataacggcgtccagggattcattccaaccaaatttctgagcgacaaagtggtg
aaacaccccgaggagagggtcaaggtgggcatgacggttcactgcaggatcatgaagatc
gacatcgagaagttcagcgttgacctcacgtgccgcacctcagatctgatggacaagaac
aacgagtggaagcttcccaaggacagctactacgactttgacacggaggctgaagaccag
aaactggatgaagagttcaaaaagaaacagcagcgcacaccatacataaagcgtgtgatc
gcccaccccaacttccacaatatcagtttcagccaggcagagaagatgatggagacgctg
gaccagggagacctgatcatcaggcccagcagcaaaggggagaaccatctgaccgtcacc
tggaaagtggcagatggcatctaccagcatgtggatgtgagggaagaaggcaaagaaaat
gctttcagcttgggccatacactctggatcaatactgaagaatttgaagatctagatgaa
attacagctcgatacattcagccgatggcctcgtttgcacgagatctgttgggacataaa
tacttccaggattgcagcggaggaagtaaagagaaaatggaggaattattgatcaggaca
aagcgagagaagccgactttcattccttactttatttcagcctgcaaagacctgccagga
aagtttattttgggctaccagcctcgtggaaaacctcgagttgagtatgtgaccatcacc
ccagatggtttccgctaccgttcccagatctttcccacagtgaatggactctttcgatgg
tttaaggaccactatcaggagccggtgccaggtattactcccaccaacagcagcagaacc
agaacccctgcatcactaaatgcaacgccagccaatattaacattgcagacttaacgcga
gccgtcaacgccctcccacgcaacatgacttcccagatgttcaacgccatcgccgcggtg
acgggccagaaccagaaccccaatgccacccctgcacagtggggctccagccagtacggc
tacggcggcagcacaggaggagggggaggcagctcctctgcttatcatgtgtttgcgaca
ccacagcagcccatggcgacgcccatgatgacgcccagttactcctacacaacgcccagc
cagcagcccctcggcactcctcagtatccgggctccaccccccagtcctcacacgtacac
gcccacccacacctgccacatcccagccatcacggcgctcccagcagccaccacggccac
gcctccggcacgccgtcgtcgtcctcttcgtcccgcagaggaacgccgcagcagcaacag
ccgacgccgccgcagccaaagccgagcagcagtgcctcctcctccacggcggttgactgg
ggcaagatggccgaacagtggctgaaggagaaagaagcagaggacaggaagaagacccag
aggatgacgccgcggccttcgcccagccccatgatcgagagcacgcccatgtcgctcgcc
ggagacgccacgcccctgctggacgaaatggaccgatag
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integrated database retrieval system
