Xiphophorus couchianus (Monterrey platyfish): 114152783
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Entry
114152783 CDS
T05908
Symbol
gemin5
Name
(RefSeq) gem-associated protein 5 isoform X1
KO
K13133
gem associated protein 5
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114152783 (gemin5)
03041 Spliceosome [BR:
xco03041
]
114152783 (gemin5)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114152783 (gemin5)
mRNA cycle factors
P-body specific factors
114152783 (gemin5)
Spliceosome [BR:
xco03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
114152783 (gemin5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_GEMI5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR5
GEMI5_RBS
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
DSE1_N
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
PAC11
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_RFWD3
Beta-prop_VPS8
DNAI3_WD
ASA1
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_WDR75_2nd
WD_LRWD1
TPR_Sec16
TPR_IF140-IFT172
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
114152783
NCBI-ProteinID:
XP_027886592
LinkDB
All DBs
Position
11:9523867..9538195
Genome browser
AA seq
1428 aa
AA seq
DB search
MRERSLPASPNWYSSRCSDVSSSGLLGVGAKSVIYLIEVSAASCRVTGELVGHRDLVSGF
SFCQHPEQSHICVSSSTDGSVRFWDSNNKTLIRKNAPHQSPISAVHWSPADKNLVVSGDE
KGVVVCHWFHTGDTASFFPEPRTIFCLTCSPHSWKSVAVGYKDGMIVLIDISKKGEVMQR
LRGHDNEIHSLAWSPLIGEDTLYTRAEDHDATNGVSAGEESGCFLASGSKDQTVRIWSTA
KGKGVMTLKLPFLKRRGSAVDPGVKERIWLNVHWPKGRATQLVSSCFSGELAMWDLAKNG
KQKWSLFGTSSEGQNHSRIVFNMSSVQLQDGREILISTSMDREIKCWDLDSLSCCWTLPT
LGGHIYTLTFSPVGVGCLALGVGDNLIRVWNTLSTQNQYDVRSFWQGIKSKVTALAWHPK
KEGSLAFGTDDGKVGIYDVFSNKPPQISSSYHKKTVYTLSWGPPVPPLSFGAEGKQSDSL
YSCAGEGVILQHDPARLNGEASDIDKLIRDTNNIQHKLSPHTDLSWKPDGKVVAIGNEDG
SIDVYQAPSLLLLCSIQQHHKIINTLRWHHGHGTAPELHCLLASGSSNAVVYVHDLRSVI
ENPPESPAVLTEPYRRLCGHTAKITSVAWSPHHSGRLVTASYDGTAQVWDVLEEAAISNY
RGHTGYLLCVDWSPTDPDVIWTGGKDFTVQEWKVSQQEFTKPPKGKKMALMQEKKQKKKN
KTASGSVGPAEPKINGEPATEGKQAEQGLSEEDEEEEVRSSNSLESPAAVNEVPRKSTPA
AKPKDKPDLMKKKKPRSMLPLSTSMDHRPKEELLQDCLTLASVKHSSAPPAGCVPGRGDY
IHLGLFHDREALYCMFEAEEKSHMEAGHYDSVVYLRLWSGDLQGALQLATERGELNDHLL
SIAPMAGFEVWSRTVEAFVKQLCLQEQFLKAASHLLSINKLYEAVDLLRSNKLYREAIAL
VKARLPADQPLLKDLYTCWAAVLEKDGHLSAAAKCYLGAGCSFDAAKVIARKNDAPSLRT
AADLARISGEEVLGQTLALRCAKDLAAAQDWVGAQEVLSSQSPLLAHRLHLCVAELLAAA
LADSGVLAPASCVSTHRWATLNGSNTLQDRARDIWEEEFNVFLNSAGDRSISALLEELKS
VETPARSASIPLRQVLLYSSVHLTRSLLSWLLSDDGQLMTELWQAAAWIGDAGHFEVSAA
FCRLLFPEGDVRIFSRKHSKTLHLSEAEAGSLQALVCYHSLYECWWRDSVVQNGPGFCSN
DEPNDEAGAAELKERCSQGLDFEPSVLLSEPHAACQATQRSVRETQERLSTMVLQHSRVQ
DGRTESGNQQEGSPFQTATSDVEQRSEEEEETFLSLSSKMSKLQQTLENIPNTIKMFPRP
DVVECCLVLLHLDKSSSISDVLRQQAKDLLRKYGTSLPVLKASRGFLT
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagaggtctcttcccgcctctcctaactggtacagctcgcgctgcagtgatgtc
agcagcagcggtttgctgggagtcggagccaaaagcgtaatctacctgattgaggtttct
gctgcttcatgcagggttacaggtgaactcgtgggccacagggacttggtgtctggcttt
tcattctgccagcaccctgagcagagtcacatttgtgtcagctcctccactgatggcagt
gtgcgcttctgggactctaataacaaaactttgatcaggaaaaatgcacctcatcagagc
cccatctcagcggtgcactggtcccctgcggataaaaacctggtggtgtcgggtgacgag
aagggagtggtggtctgccactggttccacactggcgacacggccagcttcttccctgag
ccgaggaccatcttctgcctcacctgctctcctcacagctggaagtctgtggctgttggg
tacaaagacgggatgatcgtgctgattgacattagtaaaaaaggcgaggtgatgcaacgc
ctccgaggacatgacaacgagatccactcgctggcgtggtctccgctgatcggggaggac
acactctacaccagagctgaggaccatgatgcaacaaatggagtttcagctggggaagaa
tcaggctgcttcctggcttctggaagcaaagaccagacggtgaggatctggagcactgct
aagggaaaaggcgtgatgacgttgaagctgccatttctgaagagaagaggctctgctgtc
gaccccggggtgaaagagaggatctggctcaacgtccactggccaaagggacgagcgacg
cagctcgtttccagctgcttcagtggtgagttggcaatgtgggatttggccaagaatggg
aagcagaagtggagcctgtttggaacgtcgtctgagggtcagaaccacagccggatcgtc
ttcaacatgagttcggttcagctgcaggacggccgagagattctcatcagcacatccatg
gatagagagattaaatgctgggacctggactctctgagctgctgttggaccctgcccacc
ctggggggccacatctacaccctgaccttctccccggtgggcgtcggctgtctggcgctt
ggcgtcggggacaacctgatccgagtgtggaatacgctgagcacccagaaccagtacgac
gtcagatcgttctggcagggcatcaagtccaaggtcacagcgctggcgtggcacccaaaa
aaagagggatccttggcttttggaaccgatgatggaaaagttgggatctacgacgtcttc
tccaacaagcctcctcagatatcgagctcctatcacaagaagactgtgtacacattgtcc
tgggggcccccagtgcccccgctgtcgtttggtgcagaaggaaagcagagcgacagtctg
tacagctgcgccggcgagggcgtcatcctgcagcacgacccagcgaggctgaacggagag
gcgtcggacatcgacaagctcatcagagacaccaacaacatccagcacaagttgtctcca
cacacggacctcagctggaagccggatgggaaggttgtcgccatcggcaacgaggatggg
agcattgatgtgtatcaggctcccagtctgttgctgctgtgcagcatccagcagcaccac
aagatcatcaacacgctgcgatggcaccacggccatggcactgcaccggagctccactgt
ctgctggcctcaggctccagcaacgctgtcgtctacgtccacgacctccgctctgtcatt
gagaatcctccggagagcccggcggtgctgaccgagccgtaccgccggctctgtggtcac
acggctaaaatcaccagcgtggcctggagtccgcaccacagcggccgactcgtcaccgcc
tcgtacgacggcacggctcaggtgtgggacgtcctggaggaagcggccatctccaactac
cgcggtcacactgggtatctgctgtgtgtggactggtctccaactgatccagatgtgatc
tggactggagggaaagacttcacagtccaggagtggaaggtttcccagcaggagttcacc
aagcctcctaaaggaaagaagatggccctgatgcaggaaaagaagcagaagaagaagaac
aagacagcgtcaggatctgttggaccggcggagccgaagatcaacggcgagccggcgact
gaaggaaagcaggcagagcagggtctgtccgaggaagacgaagaggaagaagtccgatca
tcaaacagtctggaatctccagctgcagttaacgaggtaccaagaaaatccactcctgct
gcaaaaccgaaagacaaaccagacttgatgaagaagaagaagcctcgctctatgctgcct
ctcagcacatccatggaccaccggcccaaagaggagctgctgcaggactgcctgactctg
gcttcagtcaaacactccagtgcgccacctgcaggctgtgtccctggccgaggagattat
atccacctgggtctttttcatgacagagaggctctatactgcatgtttgaggctgaagag
aagagccacatggaggcgggccactacgactctgtggtgtatctgcggctctggagcgga
gacctgcagggggcgctgcagcttgccacagagagaggagagctcaacgaccacctgctc
tccatcgctcccatggctggcttcgaggtgtggagccgtacggtggaggccttcgtcaag
cagctgtgtctgcaggagcagtttctgaaggcggcgtcccacctgctgtccatcaacaag
ctgtatgaggctgtggacctgctgaggtccaacaagctctacagggaggccattgctctg
gtgaaagcccggctccccgcagaccagcctctgctgaaggatctctacacatgctgggct
gctgtgctggagaaagacggacatttatctgctgccgctaaatgttacctcggtgccggc
tgcagttttgacgcagccaaagtcatcgccaggaagaacgacgccccgtctttgaggacg
gcggctgatctggcaagaatctccggagaggaagttctgggccaaacgctggctctgaga
tgcgctaaagacctggcagctgctcaggactgggtcggagcacaagaggttctgagctcg
cagagccccctgctggcccacaggctccatctgtgtgtggctgagctgctggccgcggcg
ctggcggactccggggtcctcgccccggcttcctgcgtctccactcatcggtgggcgacc
ctgaacggttccaacaccctgcaggacagagcgagagacatctgggaggaagagtttaac
gttttcctgaattcagctggagatcggagcatcagcgcgcttctggaagagctgaagtct
gtggagactccggcacgaagcgccagcattcctctcagacaggtcctgctgtactcctcg
gtccatttgactcgctcgctgctcagctggttgctgagcgacgacgggcagctgatgacg
gagctgtggcaggctgcggcttggatcggagacgctggacactttgaggtctctgcggcg
ttctgccggctgctgttccctgaaggtgacgtcagaatattttccaggaaacattccaaa
acactccacctctctgaagctgaagctggcagcctgcaggcgttagtttgttaccacagt
ctgtatgagtgctggtggagggactcggtggtccaaaacggacctggcttctgcagcaac
gacgagccgaacgacgaggcaggagcggcggagttgaaagagcggtgctctcagggactg
gactttgagccatcagtgcttctgtcagagcctcacgccgcctgtcaggccactcagagg
tcagtgagggagacccaggagcgactgtccaccatggttctgcagcacagccgtgtccaa
gatggacggacggaatctgggaaccaacaggaaggcagtccgtttcagacagcaacctca
gacgttgagcaacgatctgaggaggaggaggaaactttcctctctttgtcctcaaagatg
tccaaactccaacagaccctggaaaacattcccaacacaatcaagatgtttcctcgtcca
gatgtggtggaatgttgccttgttctcttgcatctcgacaagtcgtcttccatctcagac
gtccttcgacaacaggccaaagatctgctccgaaaatacggaaccagtctgcctgtcctg
aaagcgtcccgaggattcctgacgtga
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integrated database retrieval system
