Xiphophorus couchianus (Monterrey platyfish): 114152789
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Entry
114152789 CDS
T05908
Symbol
nedd1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xco03036
]
114152789 (nedd1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xco04812
]
114152789 (nedd1)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
114152789 (nedd1)
Microtubules and associated factors
gamma-tubulin ring complex
114152789 (nedd1)
Cytoskeleton proteins [BR:
xco04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
114152789 (nedd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
EIF3I
Beta-prop_HPS5
Beta-prop_WDR19_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_IFT122_1st
PQQ_3
MSL1_dimer
Motif
Other DBs
NCBI-GeneID:
114152789
NCBI-ProteinID:
XP_027886607
LinkDB
All DBs
Position
2:complement(8928382..8938886)
Genome browser
AA seq
655 aa
AA seq
DB search
MEEVTRLVSTGDCVKIWDAVSMATLEQFNPHSGSHPVAQACWSSNNQYLVSASSSGDKLV
VSSLKSAPVPVVELADGKKQTRVCLSSSSQFLISGGLDHCVHMWDLKSKRLHRSLKDHKE
EVTCVSFNANDSCIVSGSTSGDLVLHSLTTNLSSRAFGHGSNQPIHDLRLSTVKRSLLGS
VSDSGTMVLWDANTQRELQMFDGAHKAPGSGLAFSPTSDLLVVSVGLDKKIICYDTASKL
ILRAIRVDGPLTSVDFALDGTGLVVGSTQGKIYQYDLRNSSSPTRITVAHKTSVTCLRFQ
SNASRHKSSKLGSAKISSSKRSSSKLGSQPDPAPSTGPAPQRQVTCTAGGASAEVMCREG
EGQQGAEQRPQGEKFGIVGRNSLDIFSPTREGPDPGTQGVGGDAAFGRSQVTGLEGEGQE
LVGRASLDIFSPVREDSQTGGGSQRRTPLGTHRSAAGGRSYSPLSVFQSPQTIKEEEPTN
AAAAIEPSDRKPERSSGSSQEEGPQTPPTTTQQTNQSQAPPPIFTPEPNLRRTNGIQTQL
SYNSPATAAASGSAAMAAACSSLSQNIADVVGQDGAAPLTSLQIHFIQNMIHETLEEFRT
ACHKDILNLQVEMIRQFYIQLTEIHSLIEKYSVNESLVEEIEKLREENRRLRANY
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtgacgcgcctggtgtcaaccggagactgtgtgaagatctgggatgcggtt
tccatggcgaccctggagcagtttaacccccacagcggcagccatcccgtagctcaggcc
tgctggagctccaacaaccagtacctggtgagtgccagcagcagcggagacaagctggtg
gtttccagtctcaagtcggctcctgttccagtggttgaactggctgatgggaaaaaacag
acccgggtgtgtctgagttcctcatctcagtttttgatcagtggcggtctggaccactgc
gtccacatgtgggacctgaagagcaagaggctgcaccgctccctcaaagaccacaaagaa
gaggtcacctgtgtgtccttcaacgctaacgacagctgcatcgtctctggatccaccagc
ggtgacctggtcctgcacagcctgaccaccaacctgtccagcagagccttcggccacggc
agcaaccagcccatccacgacctgcggctgtccacggtgaagcgctcgctgctgggaagc
gtgtctgacagcggcaccatggtgctgtgggacgccaacactcagagggagctgcagatg
ttcgacggcgcccacaaggcgcccggctcgggtttggctttctccccgaccagcgacctg
ctcgtcgtcagcgtcggcctcgataagaagatcatctgctacgacacggccagcaagcta
atcctgcgggcgatccgtgtggacggccctctgacctcggtggacttcgcgctggatggc
accggcctggtggtcgggtccactcaggggaaaatctaccagtacgacctgaggaactcc
agcagccccaccagaatcacagtggcccacaaaacctccgtcacctgcctgcgcttccag
agtaacgccagcagacacaagtccagtaaactcgggtctgccaagatttccagttcaaag
agatccagttccaaactgggcagccagcctgaccccgcccccagcacaggccccgccccc
cagagacaggtcacctgcacagcagggggcgccagtgcggaggtgatgtgtcgtgagggt
gaaggccagcagggggcagagcaacgtcctcaaggggagaagttcgggatcgtgggacgg
aacagtctggacatcttctctcctactcgtgaaggtccagacccggggactcagggggtt
ggaggagacgctgcctttggaagatcacaagttaccggtttggagggcgaaggtcaggag
ctggtgggacgggccagcctggacatcttctctccggtcagagaagactctcagacgggt
ggcggctcacagcgccggacgcctctggggacccaccggagtgccgccgggggccggtcc
tacagcccgctgtccgtcttccagtccccgcagacgatcaaagaggaggagccgaccaac
gccgccgccgccattgagccgtctgacaggaagcctgagaggagcagtggctccagccag
gaagaggggcctcagactccgcccaccacaacccagcagaccaatcagagtcaggcgccg
ccgcctattttcactccagaaccaaaccttcgtagaaccaacggcattcagactcagctc
agttacaactcacctgccaccgcagcagcttcaggttcagctgcgatggcagcggcgtgc
tcgtctctgtcccagaacatcgcagacgtggtcggacaggacggcgccgctccgctcacg
tccctgcagatccacttcatccagaacatgatccacgaaacgctggaggagttcaggact
gcctgtcacaaagacatcctcaacctgcaggtggaaatgatccggcagttttacatccag
ctgacggagatccacagtctgatcgagaaatattctgtcaacgagtctctggtggaggag
atcgagaagctgcgggaggaaaaccgccggctcagagcgaactactga
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