Xiphophorus couchianus (Monterrey platyfish): 114152869
Help
Entry
114152869 CDS
T05908
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Pathway
xco03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
114152869 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xco03019
]
114152869 (nup98)
03036 Chromosome and associated proteins [BR:
xco03036
]
114152869 (nup98)
Messenger RNA biogenesis [BR:
xco03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
114152869 (nup98)
Chromosome and associated proteins [BR:
xco03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
114152869 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
114152869
NCBI-ProteinID:
XP_027886775
LinkDB
All DBs
Position
11:14012423..14032911
Genome browser
AA seq
1816 aa
AA seq
DB search
MFNNSFGTPFGGGTGGFGSSSAFGQQNTSFGAAGGFGTSAFGATTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGGATGTSTSLFGNTGTGTSGGLFSQQSNAFGANKPTSFS
SFGTSTSSGGLFGSTNNATNPFGASSSLFGGSGFAANQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGAGGLFGGATPTSSAST
GLFGATASNSNFTFGPNKSTFGPATGSLGTSSLFSQQNQQQANSLFKPFGAPTTTQSFTF
GNTNTMGQPNTSTMNLFGNTAAPQTGGLFGNTQTSTATGFGTSSGLFAPQSTVFGTGGTQ
PSPFGNKPTGFGTTTTSASSFGTNPGIFGIKPALTMGTGTNASTFGFGPNPAGGGLLSNK
LITGGLGAGLGTNFPTVGTGSLFGSTQNKPGTVPGMGCFNTGGFSSGSGGSGFGVTQQPV
ALTDPNANAAQQAILQQQLNVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNPTAQKALTT
PTHYKLTPRPATKVRPKALTSSGASKSQLFDGLDDDEPSLTNGAFVPRKSIKKLVLKNLS
SSQYSSSSLNKDSDDLASPSEYPQNGHSQAEDNDLREVPGVSGRADDDPEVTQFYVNPIA
KPIPQSRAQPSLQDTISDLNMHKQPRNDLELSSDDVSASLGDDSLQEDREEEEEEEQEES
KPSPHPAGIVLNRVGYYTIPPLDDLAEMLDENRECVVENFTVGRKGYGSVFFPGEVNLTG
LNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCAQIRSPERLVD
MNYEGRLEKASRKQGARFLEYRPETGSWVFEVSHFSKYGLQDSDEDDEVPPKIDPKKLKT
MMSLPASRLQQLLPPSQQQVAPQAQSTAVDLASGVAELDSDMADITQGIPTESMLGGEEE
DGELPLVDMETPALTNHEPAVCSHIPSTLGINPHTLQIMKASLFTEDEEDGDMFQLHTAT
KASADISSPRLVLPGSQGRPSVRGLLQARFTSGIFPQRVESPLSRGSPAAADPLRPPRWK
SPVPAPFLLPARAPEPAIRTVGVRRLGGPVPLKESVTQGKGALLMDTGLFATRSFRVGWG
PGWTLAHCGSRLSAQSADQTEFQEQRTKTDFSFLHKPARTKPLAESPYKVVVEQLVGLEA
TQGTKMSEEEEEEERHAVLQRPLEISLKHSTVSVPEGASCPLVEPRPGVAALHDYAEWIR
ELTAERSDADPVLGHWAEVWTLCEALWGQLDPDAGPLDDYQQQLQRRRAFSDWLARGAAS
RVEEEVALAGKGRHAEALFSYLTGRRISEACQLAQREGDHRLALLLSQASGSRFCRQLLD
LQLADWSRTQTDLHLTEERLRIFALLAGKPVWQSSGSTVNVCSELDWKRCLAVHLWYLLP
PTASVADALVAYEAAFQGSTEAGRYACTPLPPYLDGAPPLEEEEEEPERPLLDLCFHLLK
LYSDRLYGLQPLLDPLTVTWRRLDYRLSWHLWGVLQALRYTHLAAPRQGLVHAAYAAQLE
SAGLWHLAVFILLHVPDHRQRERAVRELLALHCPLLETEESARRERFLTDGLLVPESWIH
EAKAVRARRDGDRHRQALHLYRAGHWNQCHRLLIQHLASDCIVNDNHDYLLEFLEGLAVP
EHSASIQDWETAGRVYLDYIRVIKSLQDIQQTDSSGAGYQLERLYSDVTSLCGRIELLPC
RTARDHLAQSEMAKRVANILRAVLSLQQGDGAADPLSVPLEQLAPHISRLPMPEDYALEE
LRGLTQSYLRQLVVSQ
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaattcgtttgggactccgtttggcggtgggacggggggcttcggctcctct
tctgccttcggccagcaaaacacgagtttcggtgcagcaggaggttttgggacgtcggcg
ttcggggcgaccacaaacaccggaggattgtttggctccacgcagaacaaacctggcggt
ctgtttggatccagcaccttcagccagccggcaacttcctccaccagcacggggttcggg
ttcggcggcgccaccgggacgtccaccagcctgtttggaaacaccgggaccggaaccagc
ggcggtctcttctcccagcagagcaatgcgttcggtgccaacaagcccacttcctttagc
agctttgggaccagtaccagcagcggcggcctgttcggttccaccaacaacgccaccaac
ccgttcggcgcctccagctcgctgttcggaggctccggctttgcagccaatcagcagcca
ggaaccacagtgaagttcaaccctccaacaggaagtgacacgatggtgaaagccggcgtg
accacgagtatcaacaccaaacaccagtgcatcaccgccatgaaggaatacgagaacaag
tctctggaggagctgaggctggaggactaccaggcgggcaggaagggccccaccaacccc
atggcgcccggcgctggtggcctgttcggcggggccacccccacctccagcgcctccacc
ggactcttcggtgccactgcctccaactccaacttcaccttcgggcccaataaatcaact
tttggacccgccactggatccttaggaaccagcagcctgttcagccagcagaaccagcag
caggccaacagcctcttcaagccgttcggcgcccccaccaccacccagagcttcaccttc
ggcaacaccaacaccatgggccagcccaacaccagcaccatgaatttgttcggcaacacg
gcggcccctcagacgggcggattgttcggaaacacccagaccagcacggccactggcttt
gggaccagttctgggctgtttgcccctcagagcactgtctttggaaccggtggcacacag
cccagtccgttcgggaacaaacccactggattcggaaccaccaccactagcgcttcgtcg
tttggcacaaaccccggaatctttgggatcaagcccgctctgactatggggaccggaacc
aacgcctccactttcggttttggaccgaacccagctggaggaggactccttagtaacaaa
ctgatcactggtggactgggagccggactaggaaccaactttccgacggtcggaaccggg
tctctgtttggaagcacccagaacaagccgggcacggtgccaggaatgggatgcttcaac
accggcggcttcagcagtggcagtggcggctcgggtttcggggtcacacagcagcccgtc
gcgctgacggacccgaatgccaacgccgcccagcaggccatactgcagcagcagctcaac
gtgcttgcctactcgccgtacggcgactcgccgctcttcaggaacccgctgagcgacccc
aagaagaaggaggagcgtctgaagccgaccaatccaacagcccagaaggcgctgaccacg
cccacccactacaagctgacgccgcgacccgccaccaaggtccggcccaaagcgctcacg
tcgtccggcgcctccaagtcgcagctctttgacggtctggacgacgacgagccgtcgctc
accaacggagcctttgtgcccaggaagagcatcaagaagctggttctgaagaacctgagc
agcagccagtacagcagcagcagcctgaacaaagacagcgacgacctggcctcgccttca
gaataccctcagaacggacacagccaagcggaggacaacgacctccgggaggttccaggt
gtgagcggccgggccgacgacgaccccgaggtcacccagttctacgtgaaccccatcgcc
aagcccatcccgcagagccgcgcccagcccagcctgcaggacaccatcagcgacctgaac
atgcacaagcagcccaggaacgacctggagctgagcagcgacgacgtctctgcatccctc
ggtgacgactctctgcaggaggacagggaggaggaagaggaggaggagcaggaggagtcc
aaaccgtctcctcaccctgcaggcatcgttctgaaccgggtgggttactacaccatcccc
cctctggacgacctggccgagatgctggacgagaacagagaatgcgtcgtggagaacttc
accgtcggcaggaaaggttacggctctgtcttcttccccggagaggtcaacctgacgggc
ctgaacctggacgagattgtacacttcaggcgcaaagaggtcatcgtttacccggatgac
aagaacaagccgccggagggggaggggcttaaccggcgggctgaggtgaccctggacggc
gtctggcccaacgataagacgacctgtgctcagatccgcagcccagagcgactcgtcgac
atgaactacgagggccggctggagaaggcctccaggaagcagggagcgcgcttcctggag
taccgacccgagaccggctcctgggtgttcgaggtcagccatttctccaaatatggcctc
caggattcagacgaagacgacgaggtcccgcccaaaatcgaccccaagaagctgaagacg
atgatgtcacttcctgcttccaggctgcaacagctgcttcctccatcccagcagcaggtg
gcgccgcaggcccagtccaccgctgtggatttggcgagcggcgtggcggagctggacagc
gacatggccgacatcacgcagggcatcccgacagagagcatgctgggaggagaggaggag
gacggcgagctgccgctggtcgacatggagacaccagcgctgacgaaccatgagccggcg
gtgtgcagccacatcccgtccactctgggcatcaacccgcacacgctgcagataatgaag
gcgtctctgttcactgaggacgaggaggacggcgacatgttccagcttcacacagcgacc
aaggcgtccgccgacatctcgtcccctcggctcgtcctgccgggctctcaaggccggccg
tcagtcaggggtcttcttcaggcccgcttcacctccggcatcttccctcagcgcgtggag
tctcctctgtcccgcggttccccggcggcagccgacccgcttcggcctccacggtggaag
agtccggtccccgccccgttcctgctgccggcccgggccccggagcccgccatcaggacg
gtaggggtgcggcggctgggcggccctgtccctctgaaggagtccgtcactcaggggaag
ggggcgctgctgatggacaccggcctgttcgccacccgctccttcagagtgggctggggt
cccggctggaccctggcccattgtggcagccgactcagcgcgcagtccgccgaccagaca
gagttccaggagcagcgcaccaagacggacttcagcttcctgcacaaaccggcccggacc
aaaccactcgctgagagcccctacaaggtggtggtggagcagctggtgggactggaagct
actcaggggacgaagatgagtgaggaagaagaggaggaggagcggcatgcggtgctgcag
cgccccctggagatcagcctgaagcacagcaccgtcagcgtccctgagggcgcatcctgt
ccgctggtggagccgcggcccggtgtggcagcgctgcacgactacgccgagtggatcagg
gagctgaccgcggagcgcagcgacgctgaccccgttctgggccactgggccgaggtgtgg
acgctgtgcgaggctctatggggccagctggacccagacgccggccccctcgatgactac
cagcagcagctgcagcgccgccgcgccttttccgactggctggcccgcggcgccgccagc
agggtggaggaggaggtggcgctggcggggaagggccgccacgcagaggcgctgttcagc
tacctgacgggccgccgcatcagcgaggcgtgccaactcgcccagagggaaggcgaccac
cgcctggccctgctgctgtcacaggcctccgggtcgcggttctgccgccagctgttggac
ctgcagctggccgactggagtcggacgcagactgacctccacctgaccgaagagcggctg
cggatcttcgccctgctggccgggaagccggtgtggcagtcgtccgggtcaacggtgaac
gtctgctcggagctggactggaagcgctgcctggccgtccacctgtggtacctgctgccg
cccaccgcctccgtggccgacgcccttgtcgcctacgaagccgctttccagggctcaaca
gaggctggcagatacgcctgcacaccactgccaccgtacctggatggggcgccaccccta
gaagaggaggaggaggagcctgaacgaccgctgctcgacctctgcttccacctgctgaag
ctctacagcgacagactgtacggcctgcagccgctgctcgacccgctcaccgtcacctgg
cggcgcctggactaccggctcagctggcacctgtggggcgtgctgcaggcgctgcgctac
acccacctggccgcgccgcgccagggcctcgtccacgccgcctacgccgcccagctggag
agcgccggcctctggcacctggccgtcttcatcctgctgcacgtccccgaccacaggcag
cgggagcgcgccgtcagggagctgctggcgctgcactgccccctgctggagacagaggag
tcggcccgcagggagcgcttcctgaccgacgggctgctggttccggagagctggatccac
gaggccaaggcggtccgggcccggcgggacggggaccggcaccgccaggccctgcacctg
taccgggctggacactggaaccagtgccaccggctgctgatccaacacctggcctcagac
tgcatcgtcaacgacaaccacgactacctgctggagttcctggagggcctggcggtacca
gaacacagcgccagcatccaggactgggaaacggccggcagagtctacctggactacatc
cgggtcatcaagtccctgcaggacatccagcagacggacagctccggtgctggctaccag
ctggagcggctctactctgacgtgacgtcgctctgcggccgcatcgagctcctgccctgc
cggaccgccagggaccacctcgcccaatcagagatggcgaagcgcgtggcgaacatcctg
cgggccgtgctgagcctgcagcagggcgacggcgccgccgacccgctcagcgtcccgctg
gaacagctggcgccgcacatcagccgcctgcccatgccagaggattacgctctggaggag
ctgcgcggcctgacccagtcttacttgcgacagctcgtcgtcagccagtga
DBGET
integrated database retrieval system
