Xiphophorus couchianus (Monterrey platyfish): 114152945
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Entry
114152945 CDS
T05908
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xco04131
]
114152945 (tbc1d8b)
Membrane trafficking [BR:
xco04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
114152945 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
114152945 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
Ric8
Motif
Other DBs
NCBI-GeneID:
114152945
NCBI-ProteinID:
XP_027886923
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All DBs
Position
11:20654203..20674752
Genome browser
AA seq
1135 aa
AA seq
DB search
MWLKPEEILLKNAFKLWVTEKDNEYFVLQRRRGYGDGGGGLTGLLVGTLDTVLDSTSKVA
PYRILHHTPDSQVYWSIACGVTKEEIDQHWDWLQQNIMRTLSVFDSTEDITSFVQGKIRG
LIAEEGKTSLVLEDDPEKFREALLRFEKWFELPSQEKLVTYYSCSYWKGKVPCQGWLYLS
TNFLCFYSYLLGAEVKLIISWDEIWRLEKTSNVILTESIHVLAHGEDHYFSMLLHLTETF
VIMEQLANYSIKRLFDKEAFQGEPALSDPLQITKRGLEAHAKSEQFRAFFRLPKEENLLE
VHESFLWVPFSHFNTLGKICLSENYLCFASQDGSQCHIIIPMREVINVEKPDSGSRALTV
CVRGKRALRFSEVRDYQRLANTIRSRCGISASPQHLASSEAIRGECQSLINHFEDNPEDV
TLMVGQKDTSKAVNTEALMTVFHPQDVENLDPKMLKEKMKEQSWNIHFSEYGRGTSMFFT
KKTRDLIVRGVPESLRGELWMLFSGAVNDMATHPGYYTELVEQSLGTSTLATDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAYRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEDLIRENLPQLVEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMEALIACNDDAEAVTILNRFFDSVTNKD
SPLPPTVQQASVGNNDKASHVSVDISELIREAYEKYGHLRSEEVESSRKRNKLYVIQTLE
DTTKQNVIRVVSQDVRFTTSQLDELYNLFKRQHFLSCYWTMKSPALLHHDPSLAYLEQYQ
LGFQQFSELFSLLEPWAFCASKSTLSLWIFRLIDENQDGLINFKEFCYALDTLYGVSFTN
KLKFLFKLHLPPAFTGSPLHIKEQRVQQFLPTIEDSSHLTRLAAFDLPEDGVIRKSPERG
RGKVDLQAYLKQWQNEILKKEETIKDLPRINQAQFIQFSKTLYNIFHGHPEEESLYRAVA
HVTSLLLRMEEVGRRLQEPSSPPAEAAQPASTAASVEASSTQEASLKETSDASSSHSSQE
GAAEQLDPDWSFSFEQVLASLLNEPVIVGFFERHVHIQTKLGQARVAQLKLKANK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaaacctgaagaaattctgctgaagaacgccttcaaactgtgggtcaccgag
aaggataacgagtatttcgtactgcaaaggcgacgcgggtacggagacggaggcggcggg
ctgacaggcctgcttgtgggaactctggacactgtgttggactcgacatccaaagttgct
ccttaccgcatattgcaccacacaccagactcacaggtctactggtccatagcatgtggg
gtcaccaaagaagaaattgatcagcactgggattggctgcagcagaacatcatgaggaca
ctctctgtgtttgactccaccgaagacatcaccagcttcgtacaggggaagattagaggc
cttattgctgaagaagggaagacctctctggtgctggaggacgatccagagaaattcaga
gaagcccttttgaggtttgagaagtggttcgagctgccgtcccaggaaaagctggtcaca
tattactcatgcagctactggaaaggcaaagtcccctgccagggctggctctacctcagc
acaaactttctgtgcttctactcgtaccttctgggagccgaggtgaaactgatcatctcc
tgggacgagatctggaggctggagaaaacatcgaatgttatcctgactgagagcatccat
gttttggctcatggggaggatcattatttctccatgctgctgcatctaactgagacgttt
gtcatcatggaacagctcgccaactactccatcaagcgtctgtttgataaagaggctttc
cagggagagccagctctctccgacccacttcagattaccaagagaggccttgaagctcat
gcaaaaagtgagcaattccgggcctttttcaggcttcccaaagaggaaaacttattagaa
gtgcacgagagcttcctgtgggtgccattcagtcattttaatacgcttggcaaaatctgc
ctgtccgagaactacctttgttttgccagtcaggacggaagccaatgtcacatcatcatt
ccaatgcgagaggtcattaatgtcgagaagcccgattccggcagccgggctttgacggta
tgcgtgcgcggcaagagagcgttgcgtttctccgaggtgcgggactaccagcgacttgcc
aacacgatccgcagcagatgtgggatcagtgccagcccgcagcacttggcttcatcagag
gccatacgaggcgaatgccagtccctcataaatcactttgaggacaatccggaggatgtg
actctcatggtgggacagaaagacaccagcaaggctgtgaacaccgaggccctcatgact
gttttccaccctcaagacgttgaaaacctcgatcccaaaatgctgaaagagaagatgaag
gagcagtcttggaacatccatttctctgaatacggacgtgggaccagtatgtttttcacc
aagaagacacgagacttgattgtccgaggcgttcccgagtctctgaggggagagctgtgg
atgctgttttcaggagctgtaaacgacatggccactcaccccggctactacactgagctg
gtggagcagtctctgggcaccagcactttggccacagacgagatcgaaagagacctgcac
cgctctctcccagaacacccggcgtttcagagcgacacgggaatctcagctctgcgcaga
gtcctcactgcatacgcctacagaaacccaaaaatcggatactgccaggccatgaacatt
ctcacctctgtcctgctgctgtacgccaaggaagaggaggcgttctggctgctggtggct
gtctgtgagaggatgctgccggactatttcaaccgacgaattattggcgctctggtggac
caggcggtgttcgaggacctgatcagagaaaacctcccgcagctggtggagcacatgacg
gatctgagtttcttctcgtccgtgtccctgtcgtggttcctcacgctcttcatcagcgtc
ctgcccatcgagagcgccgtcaacgtggtcgactgtttcttctacgacggcataaaagcc
atcctgcagctcggcctcgccgtgctggattacaacatggaggccctcatcgcctgcaac
gacgacgcagaagcggtcaccatcctcaacaggttcttcgatagcgtgactaacaaagac
agtccgttgcccccaacggtgcagcaggcttcagtgggcaacaacgacaaagcatctcac
gtcagtgtggatatcagcgagctgatccgagaagcctatgagaaatacggacatttgcga
tcagaggaagttgagagttcacggaagagaaacaagctgtatgtgatccagacgctggag
gacacaaccaagcaaaacgtgatccgggttgtgtcccaagatgtccgatttacgacctcg
cagcttgacgagctttacaatttgttcaaaaggcagcatttcctcagctgctactggacg
atgaagagtccagctctgctccaccatgaccccagcctggcgtatctggagcagtaccag
ctgggattccagcagttcagcgagctcttctccctgctggagccctgggccttctgcgcc
tccaagagcacgctctccctctggatcttccgcctcatcgacgagaaccaggacggcctc
atcaactttaaggagttctgctacgctctcgataccttatacggagtatctttcacaaat
aagctgaagtttctcttcaagctccacctgccgccagctttcacaggtagtcctttgcac
ataaaggaacaaagagtccagcaatttcttccaacaattgaagactcctctcacttgacc
agactcgctgcctttgatcttcccgaagacggtgtcataagaaaaagtcctgaaagaggc
aggggaaaggttgaccttcaggcctacctgaaacaatggcaaaatgaaatacttaaaaag
gaggaaacaatcaaggatctaccaagaattaatcaggctcagttcatccagttctccaaa
accctctataacatcttccacggccacccggaggaggagtccttgtaccgggccgtagcc
cacgtgaccagcctcctcctgaggatggaggaggttggccggaggctgcaggagccaagc
agcccgcccgccgaggccgcgcagcctgccagcaccgccgcttctgtggaggcgtcttcg
acccaagaggcttccttgaaggagacctcggacgcctccagctctcacagcagccaggag
ggggcggcggagcagctggatccagattggtcgttttcctttgagcaggtgctggcctcg
ctgctcaacgagccggtcatcgtcggcttctttgagcggcacgttcacattcagacgaaa
ctgggacaagccagggttgcgcagctcaaactgaaggccaataagtaa
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