Xiphophorus couchianus (Monterrey platyfish): 114152946
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Entry
114152946 CDS
T05908
Name
(RefSeq) neuronal PAS domain-containing protein 2-like isoform X1
KO
K09026
neuronal PAS domain-containing protein 2
Organism
xco
Xiphophorus couchianus (Monterrey platyfish)
Brite
KEGG Orthology (KO) [BR:
xco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xco03000
]
114152946
Transcription factors [BR:
xco03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
114152946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
HLH
PAS
bHLH_IRO3
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
114152946
NCBI-ProteinID:
XP_027886926
LinkDB
All DBs
Position
11:20596640..20643689
Genome browser
AA seq
886 aa
AA seq
DB search
MGLPRLQKGPGWQRDTNSCVEDLMDVDEKDRAKRASRNKSEKKRRDQFNVLIKELCTMLQ
GQGHPRKMDKSTILQRTIDFLQKQKDITAQNEICDVKQDWKPSFLSNEEFTQLMLEALDG
FLVALTTDGNIIYVSDSVSSLIGHLPSDMVDQNILNFLPEREHGEVYKLLSSHMLMTDPV
AADFLDSETHIEFCCHLARGNMDPKEPPVYEYVKFVGDFKFHNHVPTSSCNGHELTLPRS
LQSSLEEQVCLIATVRLVTPQFLKDLCNVDDPCDEFTSRHSLEWKFLFLDHRASPIIGYL
PFEVLGTSGYDYYHVDDLELIAQCHKQLMQFGKGKSCYYRFLTKGQQWIWLQTHYYITYH
QWNSKPEFIVCTHTVVSYSEVRAERRRAFGLEELLPPEIAPSSVKAQELYLDICSTLDAT
RDRNSGARSVSSHSSRKSSHTALSDSLSANSYTEACTPSWPSASVGPEKTPARLQPSGSK
NLAQRQNSFDLVPQMSLSLSPTCSKHSTMQQQSQQQQQQQQQQQSSVYQLQQPQLGVMNQ
LKEQLEERTRILQADIKTQQQELHDIKEKLHLANLQMLLQQPIHNDFNQAQQQQQQQQQQ
QQQQGPGRPSQQNQNQSSVIRQLSGQPKPAACGAHSSSPLSLRENTSPSAQVQQRAPQSR
QSQSVSLPMQTNTSLTTPFYSNPMMFSQTNTRPQQDTNQRQTDNQFSHDGQLRMLLNQPM
QTTVPTSSVTSQSSQCNMGISQTLYSLEQPITSFTMQQVNCNAVLVPSPVFTSPIMIPHN
TFITHQAQSAYHSQPQASHHSVQLQQPQQFFQMTQGLVHGGSAPAFLHTTNVPQQSTMGY
IQQQQQPQTQQLPLAQQQQPQQQQRQYQHSQNQQGSVSDFRSMLTR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggacttccaagacttcagaaagggcctggttggcagagggataccaacagctgtgtg
gaggacttaatggatgtagatgagaaggacagggcaaaaagagcatctcgcaacaaatct
gaaaagaaaagaagagaccagttcaatgtgctcatcaaggagctgtgcaccatgctccaa
ggtcaaggccatccgcgcaagatggacaaatccaccatattgcagaggacgattgacttt
ttacagaaacagaaagacatcactgcgcagaatgagatctgtgacgtaaagcaggactgg
aagccctcattcctcagcaatgaagagttcactcagctcatgttggaggccctggatggc
ttccttgttgcattaacgacagatggcaacatcatatatgtgtctgacagtgtgtcgtca
cttattggccatttaccgtcagatatggtggaccaaaatatcttgaatttcctcccggag
cgcgaacatggcgaggtgtataagctgctatcatcccacatgctgatgactgaccccgtt
gctgctgatttccttgacagtgaaacacatattgaattttgctgtcatctagccaggggt
aacatggaccccaaggagcctcctgtgtatgaatatgtcaagtttgttggagattttaag
tttcataaccatgtgcctacatcttcttgtaacgggcatgaactgacgttaccgaggagt
ctgcagtcgtcactggaggagcaggtctgcctcatagcaactgtacgattagtcactcca
cagtttctgaaggatttgtgtaacgtggacgatccttgtgatgaattcacgtccaggcac
agccttgaatggaagttcctgtttttagatcacagagcatcaccaatcataggctactta
ccatttgaggttcttgggacttcggggtatgattactaccatgtggatgacttggagctc
atagcccagtgtcacaagcaattaatgcagtttggaaagggtaaatcctgctattatcgc
ttcctgaccaagggacagcagtggatttggctgcagactcattactacattacttaccac
cagtggaactccaaacccgagttcattgtctgcactcacactgttgtcagttactcggaa
gtgcgagctgaacggaggagagcttttggtctggaggagcttttaccacctgagatagcg
ccatcctctgtgaaggctcaggagttgtacttggacatctgctccaccctggacgcaacg
agggacagaaacagcggcgcacgttcggtgtcctcccacagctctcggaaatcctcccac
accgccctgtcggactctttgtcagcaaactcctacacagaggcctgcacaccatcatgg
ccgtcagcctccgttggaccagagaagacacctgccagactccagcccagtgggtcaaag
aatttggctcaaagacaaaattcctttgaccttgttccccaaatgagcctctccctttct
ccaacctgcagcaagcactccaccatgcagcagcaatcgcagcagcagcagcagcagcag
cagcagcagcagtcctctgtttatcagctgcagcagcctcagctcggcgtaatgaaccag
ctgaaggaacaactggaggagaggacgcgcattttgcaggccgacatcaagacgcagcag
caggagctgcacgacattaaggagaagctccatcttgctaatctacagatgttgttacag
cagcctattcacaatgacttcaatcaggcccaacagcagcagcagcagcagcagcaacag
cagcagcagcagggcccaggaaggccatcacaacagaaccagaaccagtccagtgtcatc
aggcaactctccggccaaccgaaaccagcagcctgtggggctcacagttcatctccactc
tctttgagagaaaacacttcaccgtctgcacaggttcagcagcgggctcctcagagcaga
cagagccagtcggtgagcttgccgatgcagacaaacacgagcctgacgacgcccttctac
agcaaccccatgatgttctcccagaccaacacgaggcctcagcaggacacaaaccaaaga
cagacggacaaccagttcagccacgatggacaattacgaatgcttctcaaccagccgatg
cagaccacggttccgactagcagcgtcacttcccagtcctctcagtgcaacatgggcatc
tcccaaactctatacagcttggagcagccgatcacctctttcaccatgcaacaggtcaac
tgcaacgccgtgctcgtgccctcccccgttttcacctcccccataatgatcccacataac
accttcatcacgcatcaggcccagtcagcctaccacagccagcctcaggcctcgcaccac
tccgtgcagctccagcagccccagcagttctttcagatgacccaaggacttgtacatggt
ggatctgctccagcttttctacacaccactaacgtcccacagcaaagcaccatgggatac
attcagcagcagcagcagccacaaacgcagcaactgccacttgcacagcagcagcagcca
cagcagcagcaaaggcagtaccaacattcccaaaaccagcaaggcagtgtttcagacttc
aggagcatgctaacgcggtag
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